RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 KIAA1210Q9ULL0 1709 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 GLTPD2A6NH11 291 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 SLC24A1O60721 1099 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 RPS6KA4O75676 772 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 GYS1P13807 737 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 ITPK1Q13572 414 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 RRS1Q15050 365 aaKnown RBP3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 RC3H1Q5TC82 1133 aaKnown RBP3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 ARHGEF1Q92888 912 aaKnown RBP3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 PRDM10Q9NQV6 1147 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 ATG3Q9NT62 314 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 ASAP1Q9ULH1 1129 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 C10orf71Q711Q0 1435 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 FYB1O15117 783 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 LMNB1P20700 586 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 CTCFP49711 727 aaPredicted RBP3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 NEUROD1Q13562 356 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 DPY19L2Q6NUT2 758 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 IFNL2Q8IZJ0 200 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 AIDAQ96BJ3 306 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 GGNBP2Q9H3C7 697 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 CREBZFQ9NS37 354 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 MKRN1Q9UHC7 482 aaKnown RBP3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 INSRP06213 1382 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 KCPQ6ZWJ8 1503 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 CICQ96RK0 1608 aaPredicted RBP3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 RGPD5Q99666 1765 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 PCNTO95613 3336 aa3.32□□□□□ -1.88
RNU4-53P-201ENST00000410828 LY75O60449 1722 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 FLT4P35916 1363 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 KIF24Q5T7B8 1368 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 CNTNAP4Q9C0A0 1308 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 ERVV-2B6SEH9 535 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 FOXN1O15353 648 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 PPM1GO15355 546 aaPredicted RBP3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 PHKG2P15735 406 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 CHRNA5P30532 468 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 RASSF7Q02833 373 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 DDR1Q08345 913 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 CHADLQ6NUI6 762 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 SIN3AQ96ST3 1273 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 RBM42Q9BTD8 480 aaKnown RBP3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 PDE4DIPQ5VU43 2346 aa3.31□□□□□ -1.88
RNU4-53P-201ENST00000410828 C4BP0C0L5 1744 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 USP42Q9H9J4 1324 aaKnown RBP3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 ST20-MTHFSA0A0A6YYL1 179 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 POLRMTO00411 1230 aaKnown RBP3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 ZPR1O75312 459 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 HSP90AB1P08238 724 aaKnown RBP3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 TM4SF1P30408 202 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 CRKLP46109 303 aaKnown RBP3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 LBX1P52954 281 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 CABP4P57796 275 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 MLLT1Q03111 559 aaPredicted RBP3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 FKBP8Q14318 412 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 FAM161AQ3B820 660 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 TTLL6Q8N841 843 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 ABHD8Q96I13 439 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 SLC4A9Q96Q91 983 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 TESK2Q96S53 571 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 EYA1Q99502 592 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 WBP1LQ9NX94 342 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 SRP68Q9UHB9 627 aaKnown RBP3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 EMILIN1Q9Y6C2 1016 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 TUBGCP6Q96RT7 1819 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 DOT1LQ8TEK3 1739 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 WDR90Q96KV7 1748 aa3.3□□□□□ -1.88
RNU4-53P-201ENST00000410828 KDRP35968 1356 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 CNTNAP1P78357 1384 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 TONSLQ96HA7 1378 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 WASHC2AQ641Q2 1341 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 IQCA1LA6NCM1 817 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 CCDC85CA6NKD9 419 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 TMEM88BA6NKF7 163 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 POTECB2RU33 542 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 H0YIN7 160 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 NFKBIEO00221 500 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 PTCD1O75127 700 aaKnown RBP3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 SERPINB2P05120 415 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 VEGFBP49765 207 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 MAP2K1Q02750 393 aaPredicted RBP3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 NFIXQ14938 502 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 ERFEQ4G0M1 354 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 AMOTQ4VCS5 1084 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 PLEKHO1Q53GL0 409 aaPredicted RBP3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 CDCA8Q53HL2 280 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 USPL1Q5W0Q7 1092 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 C2CD5Q86YS7 1000 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 MON2Q7Z3U7 1717 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 C5P01031 1676 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 USP54Q70EL1 1684 aa3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 FAM208AQ9UK61 1670 aaKnown RBP3.29□□□□□ -1.88
RNU4-53P-201ENST00000410828 KDM6AO15550 1401 aaPredicted RBP3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 LTN1O94822 1766 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 PASKQ96RG2 1323 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 C21orf2O43822 256 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 DDNO94850 711 aaPredicted RBP3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 POTEIP0CG38 1075 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 POTEJP0CG39 1038 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms