RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 AEBP1Q8IUX7 1158 aa19.7■□□□□ 0.74
MCF2L-210ENST00000409954 PELP1Q8IZL8 1130 aaKnown RBP19.7■□□□□ 0.74
MCF2L-210ENST00000409954 ZNF784Q8NCA9 323 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-210ENST00000409954 NLGN2Q8NFZ4 835 aa19.7■□□□□ 0.74
MCF2L-210ENST00000409954 RBM42Q9BTD8 480 aaKnown RBP19.7■□□□□ 0.74
MCF2L-210ENST00000409954 GNPATO15228 680 aa19.69■□□□□ 0.74
MCF2L-210ENST00000409954 TRAPPC3LQ5T215 181 aa19.69■□□□□ 0.74
MCF2L-210ENST00000409954 RTCBQ9Y3I0 505 aaKnown RBP19.69■□□□□ 0.74
MCF2L-210ENST00000409954 NFATC2IPQ8NCF5 419 aa19.68■□□□□ 0.74
MCF2L-210ENST00000409954 AMIGO3Q86WK7 504 aa19.67■□□□□ 0.74
MCF2L-210ENST00000409954 COL24A1Q17RW2 1714 aa19.67■□□□□ 0.74
MCF2L-210ENST00000409954 KDRP35968 1356 aa19.67■□□□□ 0.74
MCF2L-210ENST00000409954 AKAP4Q5JQC9 854 aa19.66■□□□□ 0.74
MCF2L-210ENST00000409954 NLGN1Q8N2Q7 840 aa19.66■□□□□ 0.74
MCF2L-210ENST00000409954 ITGB4P16144 1822 aa19.66■□□□□ 0.74
MCF2L-210ENST00000409954 DIAPH1O60610 1272 aaKnown RBP19.65■□□□□ 0.74
MCF2L-210ENST00000409954 RPS6KA4O75676 772 aa19.65■□□□□ 0.74
MCF2L-210ENST00000409954 ADRA2BP18089 450 aa19.65■□□□□ 0.74
MCF2L-210ENST00000409954 CC2D1BQ5T0F9 858 aaKnown RBP19.65■□□□□ 0.74
MCF2L-210ENST00000409954 SMIM5Q71RC9 77 aa19.65■□□□□ 0.74
MCF2L-210ENST00000409954 SLC4A9Q96Q91 983 aa19.65■□□□□ 0.74
MCF2L-210ENST00000409954 C5P01031 1676 aa19.65■□□□□ 0.74
MCF2L-210ENST00000409954 TOGARAM1Q9Y4F4 1720 aa19.64■□□□□ 0.73
MCF2L-210ENST00000409954 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
MCF2L-210ENST00000409954 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
MCF2L-210ENST00000409954 CNTNAP4Q9C0A0 1308 aa19.62■□□□□ 0.73
MCF2L-210ENST00000409954 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
MCF2L-210ENST00000409954 YBX3P16989 372 aaKnown RBP eCLIP19.62■□□□□ 0.73
MCF2L-210ENST00000409954 ARHGEF1Q92888 912 aaKnown RBP19.62■□□□□ 0.73
MCF2L-210ENST00000409954 TUBGCP6Q96RT7 1819 aa19.62■□□□□ 0.73
MCF2L-210ENST00000409954 RFC4P35249 363 aa19.61■□□□□ 0.73
MCF2L-210ENST00000409954 KDM6AO15550 1401 aaPredicted RBP19.6■□□□□ 0.73
MCF2L-210ENST00000409954 HMOX1P09601 288 aa19.6■□□□□ 0.73
MCF2L-210ENST00000409954 TAF1LQ8IZX4 1826 aa19.6■□□□□ 0.73
MCF2L-210ENST00000409954 SLC52A2Q9HAB3 445 aa19.59■□□□□ 0.73
MCF2L-210ENST00000409954 RNMTO43148 476 aaKnown RBP19.58■□□□□ 0.72
MCF2L-210ENST00000409954 MMP10P09238 476 aa19.58■□□□□ 0.72
MCF2L-210ENST00000409954 LGR6Q9HBX8 967 aa19.58■□□□□ 0.72
MCF2L-210ENST00000409954 TGFB2P61812 414 aa19.57■□□□□ 0.72
MCF2L-210ENST00000409954 CRKLP46109 303 aaKnown RBP19.56■□□□□ 0.72
MCF2L-210ENST00000409954 MTHFSDQ2M296 383 aaKnown RBP19.56■□□□□ 0.72
MCF2L-210ENST00000409954 GYS1P13807 737 aa19.55■□□□□ 0.72
MCF2L-210ENST00000409954 PARP3Q9Y6F1 533 aa19.54■□□□□ 0.72
MCF2L-210ENST00000409954 CHD4Q14839 1912 aa19.54■□□□□ 0.72
MCF2L-210ENST00000409954 UBR3Q6ZT12 1888 aa19.54■□□□□ 0.72
MCF2L-210ENST00000409954 U2SURPO15042 1029 aaKnown RBP19.53■□□□□ 0.72
MCF2L-210ENST00000409954 CFAP53Q96M91 514 aa19.53■□□□□ 0.72
MCF2L-210ENST00000409954 CCDC87Q9NVE4 849 aa19.53■□□□□ 0.72
MCF2L-210ENST00000409954 C1QTNF8P60827 252 aa19.52■□□□□ 0.72
MCF2L-210ENST00000409954 CNGB1Q14028 1251 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-210ENST00000409954 INTS5Q6P9B9 1019 aaKnown RBP19.52■□□□□ 0.72
MCF2L-210ENST00000409954 VSIG10Q8N0Z9 540 aa19.52■□□□□ 0.72
MCF2L-210ENST00000409954 UTRNP46939 3433 aa19.51■□□□□ 0.71
MCF2L-210ENST00000409954 GAS2L2Q8NHY3 880 aa19.51■□□□□ 0.71
MCF2L-210ENST00000409954 ZNF831Q5JPB2 1677 aa19.51■□□□□ 0.71
MCF2L-210ENST00000409954 SLC39A6Q13433 755 aa19.5■□□□□ 0.71
MCF2L-210ENST00000409954 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
MCF2L-210ENST00000409954 NUDCQ9Y266 331 aa19.5■□□□□ 0.71
MCF2L-210ENST00000409954 GNAT3A8MTJ3 354 aa19.49■□□□□ 0.71
MCF2L-210ENST00000409954 ZPR1O75312 459 aa19.49■□□□□ 0.71
MCF2L-210ENST00000409954 GIGYF1O75420 1035 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-210ENST00000409954 CYP19A1P11511 503 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-210ENST00000409954 TEFQ10587 303 aa19.48■□□□□ 0.71
MCF2L-210ENST00000409954 A0A0G2JLW4 131 aa19.47■□□□□ 0.71
MCF2L-210ENST00000409954 TTC5Q8N0Z6 440 aa19.47■□□□□ 0.71
MCF2L-210ENST00000409954 IL17REQ8NFR9 667 aa19.47■□□□□ 0.71
MCF2L-210ENST00000409954 TEX13AQ9BXU3 409 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-210ENST00000409954 USP42Q9H9J4 1324 aaKnown RBP19.47■□□□□ 0.71
MCF2L-210ENST00000409954 STARD3NLO95772 234 aa19.46■□□□□ 0.71
MCF2L-210ENST00000409954 TM4SF1P30408 202 aa19.46■□□□□ 0.71
MCF2L-210ENST00000409954 FKBP8Q14318 412 aa19.46■□□□□ 0.71
MCF2L-210ENST00000409954 SRP68Q9UHB9 627 aaKnown RBP19.46■□□□□ 0.71
MCF2L-210ENST00000409954 NARFQ9UHQ1 456 aa19.44■□□□□ 0.7
MCF2L-210ENST00000409954 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
MCF2L-210ENST00000409954 BCS1LQ9Y276 419 aa19.44■□□□□ 0.7
MCF2L-210ENST00000409954 FCHSD2O94868 740 aa19.43■□□□□ 0.7
MCF2L-210ENST00000409954 DPEP1P16444 411 aa19.43■□□□□ 0.7
MCF2L-210ENST00000409954 ZNF790Q6PG37 636 aa19.43■□□□□ 0.7
MCF2L-210ENST00000409954 GPBP1L1Q9HC44 474 aaPredicted RBP19.43■□□□□ 0.7
MCF2L-210ENST00000409954 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
MCF2L-210ENST00000409954 SOS1Q07889 1333 aaPredicted RBP19.43■□□□□ 0.7
MCF2L-210ENST00000409954 PPP2R1AP30153 589 aa19.42■□□□□ 0.7
MCF2L-210ENST00000409954 USPL1Q5W0Q7 1092 aa19.42■□□□□ 0.7
MCF2L-210ENST00000409954 A0A087WZG4 1122 aa19.41■□□□□ 0.7
MCF2L-210ENST00000409954 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
MCF2L-210ENST00000409954 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
MCF2L-210ENST00000409954 C10orf71Q711Q0 1435 aa19.41■□□□□ 0.7
MCF2L-210ENST00000409954 SCN11AQ9UI33 1791 aa19.4■□□□□ 0.7
MCF2L-210ENST00000409954 U2AF1L5P0DN76 240 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-210ENST00000409954 KCNA3P22001 575 aa19.4■□□□□ 0.7
MCF2L-210ENST00000409954 U2AF1Q01081 240 aaKnown RBP eCLIP19.4■□□□□ 0.7
MCF2L-210ENST00000409954 ARHGAP27Q6ZUM4 889 aa19.4■□□□□ 0.7
MCF2L-210ENST00000409954 RSPH6AQ9H0K4 717 aa19.4■□□□□ 0.7
MCF2L-210ENST00000409954 ZBTB1Q9Y2K1 713 aa19.4■□□□□ 0.7
MCF2L-210ENST00000409954 PXDNLA1KZ92 1463 aa19.4■□□□□ 0.7
MCF2L-210ENST00000409954 COL3A1P02461 1466 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-210ENST00000409954 MRC1P22897 1456 aa19.4■□□□□ 0.7
MCF2L-210ENST00000409954 MYH14Q7Z406 1995 aaKnown RBP19.39■□□□□ 0.7
MCF2L-210ENST00000409954 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
MCF2L-210ENST00000409954 POLRMTO00411 1230 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms