RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 ABCC4O15439 1325 aa22.36■■□□□ 1.17
LRPPRC-203ENST00000409946 RGS12O14924 1447 aa22.36■■□□□ 1.17
LRPPRC-203ENST00000409946 BTBD11A6QL63 1104 aa22.36■■□□□ 1.17
LRPPRC-203ENST00000409946 SLC4A2P04920 1241 aa22.35■■□□□ 1.17
LRPPRC-203ENST00000409946 EVA1CP58658 441 aa22.35■■□□□ 1.17
LRPPRC-203ENST00000409946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.173e-12■■□□□ 14.5
LRPPRC-203ENST00000409946 CYP27B1O15528 508 aa22.34■■□□□ 1.17
LRPPRC-203ENST00000409946 EIF4A1P60842 406 aaKnown RBP22.34■■□□□ 1.17
LRPPRC-203ENST00000409946 AAMPQ13685 434 aa22.34■■□□□ 1.17
LRPPRC-203ENST00000409946 G2E3Q7L622 706 aa22.34■■□□□ 1.17
LRPPRC-203ENST00000409946 API5Q9BZZ5 524 aaKnown RBP22.34■■□□□ 1.17
LRPPRC-203ENST00000409946 BTG4Q9NY30 223 aa22.34■■□□□ 1.17
LRPPRC-203ENST00000409946 PLCH1Q4KWH8 1693 aa22.33■■□□□ 1.17
LRPPRC-203ENST00000409946 TOM1O60784 492 aa22.33■■□□□ 1.16
LRPPRC-203ENST00000409946 IFNL2Q8IZJ0 200 aa22.33■■□□□ 1.16
LRPPRC-203ENST00000409946 CARD10Q9BWT7 1032 aa22.33■■□□□ 1.16
LRPPRC-203ENST00000409946 PLEKHG2Q9H7P9 1386 aa22.32■■□□□ 1.16
LRPPRC-203ENST00000409946 ZBTB40Q9NUA8 1239 aa22.3■■□□□ 1.16
LRPPRC-203ENST00000409946 USP35Q9P2H5 1018 aa22.3■■□□□ 1.16
LRPPRC-203ENST00000409946 CCDC30Q5VVM6 783 aa22.29■■□□□ 1.16
LRPPRC-203ENST00000409946 STK31Q9BXU1 1019 aa22.29■■□□□ 1.16
LRPPRC-203ENST00000409946 UBAP1LF5GYI3 381 aa22.29■■□□□ 1.16
LRPPRC-203ENST00000409946 PTPRCP08575 1304 aa22.29■■□□□ 1.16
LRPPRC-203ENST00000409946 MRC1P22897 1456 aa22.28■■□□□ 1.16
LRPPRC-203ENST00000409946 C5P01031 1676 aa22.28■■□□□ 1.16
LRPPRC-203ENST00000409946 IL2RBP14784 551 aa22.28■■□□□ 1.16
LRPPRC-203ENST00000409946 HDGFL1Q5TGJ6 251 aa22.28■■□□□ 1.16
LRPPRC-203ENST00000409946 SLC52A2Q9HAB3 445 aa22.28■■□□□ 1.16
LRPPRC-203ENST00000409946 SOS1Q07889 1333 aaPredicted RBP22.28■■□□□ 1.16
LRPPRC-203ENST00000409946 ZCRB1Q8TBF4 217 aaKnown RBP22.27■■□□□ 1.16
LRPPRC-203ENST00000409946 ZBTB7BO15156 539 aaPredicted RBP22.27■■□□□ 1.15
LRPPRC-203ENST00000409946 EIF2S2P20042 333 aaKnown RBP22.27■■□□□ 1.15
LRPPRC-203ENST00000409946 ADAMTS2O95450 1211 aa22.26■■□□□ 1.15
LRPPRC-203ENST00000409946 SLC39A6Q13433 755 aa22.26■■□□□ 1.15
LRPPRC-203ENST00000409946 NFATC2IPQ8NCF5 419 aa22.26■■□□□ 1.15
LRPPRC-203ENST00000409946 DCAF5Q96JK2 942 aa22.26■■□□□ 1.15
LRPPRC-203ENST00000409946 WNK3Q9BYP7 1800 aa22.26■■□□□ 1.15
LRPPRC-203ENST00000409946 NRAPQ86VF7 1730 aa22.26■■□□□ 1.15
LRPPRC-203ENST00000409946 PCDH11XQ9BZA7 1347 aa22.25■■□□□ 1.15
LRPPRC-203ENST00000409946 PCDH11YQ9BZA8 1340 aa22.25■■□□□ 1.15
LRPPRC-203ENST00000409946 F6X3S4 739 aa22.25■■□□□ 1.15
LRPPRC-203ENST00000409946 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
LRPPRC-203ENST00000409946 PRAMEF22A3QJZ6 481 aa22.24■■□□□ 1.15
LRPPRC-203ENST00000409946 NUTM2BA6NNL0 878 aaPredicted RBP22.24■■□□□ 1.15
LRPPRC-203ENST00000409946 NUTM2EB1AL46 878 aaPredicted RBP22.24■■□□□ 1.15
LRPPRC-203ENST00000409946 FLIIQ13045 1269 aa22.24■■□□□ 1.15
LRPPRC-203ENST00000409946 NUTM2AQ8IVF1 878 aaPredicted RBP22.24■■□□□ 1.15
LRPPRC-203ENST00000409946 N4BP2Q86UW6 1770 aaPredicted RBP22.23■■□□□ 1.15
LRPPRC-203ENST00000409946 INTS3Q68E01 1043 aaKnown RBP22.23■■□□□ 1.15
LRPPRC-203ENST00000409946 AEBP2Q6ZN18 517 aaPredicted RBP22.23■■□□□ 1.15
LRPPRC-203ENST00000409946 TOGARAM1Q9Y4F4 1720 aa22.23■■□□□ 1.15
LRPPRC-203ENST00000409946 HEG1Q9ULI3 1381 aa22.23■■□□□ 1.15
LRPPRC-203ENST00000409946 HSP90AB1P08238 724 aaKnown RBP22.22■■□□□ 1.15
LRPPRC-203ENST00000409946 RWDD1Q9H446 243 aaPredicted RBP22.22■■□□□ 1.15
LRPPRC-203ENST00000409946 HOXB7P09629 217 aa22.22■■□□□ 1.15
LRPPRC-203ENST00000409946 DDX54Q8TDD1 881 aaKnown RBP22.22■■□□□ 1.15
LRPPRC-203ENST00000409946 ANP32EQ9BTT0 268 aa22.22■■□□□ 1.15
LRPPRC-203ENST00000409946 PHAXQ9H814 394 aaKnown RBP22.22■■□□□ 1.15
LRPPRC-203ENST00000409946 CHPF2Q9P2E5 772 aa22.22■■□□□ 1.15
LRPPRC-203ENST00000409946 GIGYF1O75420 1035 aaPredicted RBP22.21■■□□□ 1.15
LRPPRC-203ENST00000409946 FKBP5Q13451 457 aaPredicted RBP22.21■■□□□ 1.15
LRPPRC-203ENST00000409946 ZNF790Q6PG37 636 aa22.21■■□□□ 1.15
LRPPRC-203ENST00000409946 ANXA1P04083 346 aa22.2■■□□□ 1.14
LRPPRC-203ENST00000409946 RGS3P49796 1198 aa22.2■■□□□ 1.14
LRPPRC-203ENST00000409946 SLC4A10Q6U841 1118 aa22.2■■□□□ 1.14
LRPPRC-203ENST00000409946 CABP4P57796 275 aa22.19■■□□□ 1.14
LRPPRC-203ENST00000409946 DISP2A7MBM2 1401 aa22.18■■□□□ 1.14
LRPPRC-203ENST00000409946 HDAC1Q13547 482 aaPredicted RBP22.18■■□□□ 1.14
LRPPRC-203ENST00000409946 GLI3P10071 1580 aa22.18■■□□□ 1.14
LRPPRC-203ENST00000409946 CHMP4BQ9H444 224 aaKnown RBP22.17■■□□□ 1.14
LRPPRC-203ENST00000409946 PAPPAQ13219 1627 aa22.16■■□□□ 1.14
LRPPRC-203ENST00000409946 UBR2Q8IWV8 1755 aa22.16■■□□□ 1.14
LRPPRC-203ENST00000409946 ZNF496Q96IT1 587 aaPredicted RBP22.16■■□□□ 1.14
LRPPRC-203ENST00000409946 PDZRN3Q9UPQ7 1066 aa22.16■■□□□ 1.14
LRPPRC-203ENST00000409946 NWD2Q9ULI1 1742 aa22.16■■□□□ 1.14
LRPPRC-203ENST00000409946 MEIS3Q99687 375 aa22.15■■□□□ 1.14
LRPPRC-203ENST00000409946 ITGB4P16144 1822 aa22.15■■□□□ 1.14
LRPPRC-203ENST00000409946 NKX1-1Q15270 411 aaPredicted RBP22.15■■□□□ 1.14
LRPPRC-203ENST00000409946 PROSER3Q2NL68 480 aa22.15■■□□□ 1.14
LRPPRC-203ENST00000409946 LAMB4A4D0S4 1761 aa22.14■■□□□ 1.13
LRPPRC-203ENST00000409946 CCT4P50991 539 aaKnown RBP22.13■■□□□ 1.13
LRPPRC-203ENST00000409946 SIRT2Q8IXJ6 389 aa22.13■■□□□ 1.13
LRPPRC-203ENST00000409946 TTC5Q8N0Z6 440 aa22.13■■□□□ 1.13
LRPPRC-203ENST00000409946 KAT6BQ8WYB5 2073 aa22.13■■□□□ 1.13
LRPPRC-203ENST00000409946 PXDNLA1KZ92 1463 aa22.12■■□□□ 1.13
LRPPRC-203ENST00000409946 CERKQ8TCT0 537 aa22.12■■□□□ 1.13
LRPPRC-203ENST00000409946 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
LRPPRC-203ENST00000409946 ATP10DQ9P241 1426 aa22.12■■□□□ 1.13
LRPPRC-203ENST00000409946 ERVV-2B6SEH9 535 aa22.11■■□□□ 1.13
LRPPRC-203ENST00000409946 MSH5O43196 834 aa22.11■■□□□ 1.13
LRPPRC-203ENST00000409946 SLIT2O94813 1529 aa22.1■■□□□ 1.13
LRPPRC-203ENST00000409946 SMC5Q8IY18 1101 aa22.1■■□□□ 1.13
LRPPRC-203ENST00000409946 CHMP4AQ9BY43 222 aa22.1■■□□□ 1.13
LRPPRC-203ENST00000409946 SPATA31A1Q5TZJ5 1347 aa22.09■■□□□ 1.13
LRPPRC-203ENST00000409946 KCPQ6ZWJ8 1503 aa22.09■■□□□ 1.13
LRPPRC-203ENST00000409946 FMNL2Q96PY5 1086 aa22.09■■□□□ 1.13
LRPPRC-203ENST00000409946 ADCY9O60503 1353 aa22.08■■□□□ 1.13
LRPPRC-203ENST00000409946 JCADQ9P266 1359 aa22.08■■□□□ 1.13
LRPPRC-203ENST00000409946 PDIA6Q15084 440 aa22.08■■□□□ 1.13
LRPPRC-203ENST00000409946 PI4KAP2A4QPH2 592 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms