RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 L3MBTL2Q969R5 705 aa6.2□□□□□ -1.42
SF3B1-202ENST00000409915 KCTD12Q96CX2 325 aaKnown RBP6.2□□□□□ -1.42
SF3B1-202ENST00000409915 PLEKHH1Q9ULM0 1364 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 ADGRB1O14514 1584 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 PTCH1Q13635 1447 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 PRAG1Q86YV5 1406 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 YTHDC2Q9H6S0 1430 aaKnown RBP6.19□□□□□ -1.42
SF3B1-202ENST00000409915 LAMC1P11047 1609 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 SRPK2P78362 688 aaKnown RBP6.19□□□□□ -1.42
SF3B1-202ENST00000409915 MTMR14Q8NCE2 650 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 C8orf37Q96NL8 207 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 HCSTQ9UBK5 93 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 GNEQ9Y223 722 aaKnown RBP6.19□□□□□ -1.42
SF3B1-202ENST00000409915 NALCNQ8IZF0 1738 aa6.19□□□□□ -1.42
SF3B1-202ENST00000409915 LRPPRCP42704 1394 aaKnown RBP6.18□□□□□ -1.42
SF3B1-202ENST00000409915 MSH6P52701 1360 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 TONSLQ96HA7 1378 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 ADGRL3Q9HAR2 1447 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 GOLGA8CPA6NN73 597 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 TK2O00142 265 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 CLCN1P35523 988 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 SAFB2Q14151 953 aaKnown RBP eCLIP6.18□□□□□ -1.42
SF3B1-202ENST00000409915 TYW1BQ6NUM6 668 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 ZNF592Q92610 1267 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 BEGAINQ9BUH8 593 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 TMUB1Q9BVT8 246 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 C14orf93Q9H972 538 aaKnown RBP6.18□□□□□ -1.42
SF3B1-202ENST00000409915 CDHR5Q9HBB8 845 aa6.18□□□□□ -1.42
SF3B1-202ENST00000409915 TECPR2O15040 1411 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 KNDC1Q76NI1 1749 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.17□□□□□ -1.42
SF3B1-202ENST00000409915 BHMG1C9JSJ3 638 aaPredicted RBP6.17□□□□□ -1.42
SF3B1-202ENST00000409915 TOM1O60784 492 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 SSTR3P32745 418 aaPredicted RBP6.17□□□□□ -1.42
SF3B1-202ENST00000409915 CLK2P49760 499 aaKnown RBP6.17□□□□□ -1.42
SF3B1-202ENST00000409915 PTPN5P54829 565 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 NBPF1Q3BBV0 1214 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 WAPLQ7Z5K2 1190 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 GPCPD1Q9NPB8 672 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 TRAK1Q9UPV9 953 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 ABCC11Q96J66 1382 aa6.17□□□□□ -1.42
SF3B1-202ENST00000409915 ANKRD62A6NC57 917 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 TMEM88BA6NKF7 163 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 PPP1R3GB7ZBB8 358 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 C3orf80F5H4A9 247 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 KDM4AO75164 1064 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 ZNF16P17020 682 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-202ENST00000409915 ERCC3P19447 782 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 MDM2Q00987 491 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-202ENST00000409915 EN1Q05925 392 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-202ENST00000409915 NBPF8Q3BBV2 869 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 TMEM259Q4ZIN3 620 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 C6orf132Q5T0Z8 1188 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 HDGFL1Q5TGJ6 251 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 MYSM1Q5VVJ2 828 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 CCER1Q8TC90 406 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-202ENST00000409915 UBXN4Q92575 508 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 PRAM1Q96QH2 718 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 PSMD1Q99460 953 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 PRM3Q9NNZ6 103 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 PLA2G2EQ9NZK7 142 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 PPP1R1BQ9UD71 204 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-202ENST00000409915 TBC1D2BQ9UPU7 963 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 ROBO1Q9Y6N7 1651 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 MST1RQ04912 1400 aa6.16□□□□□ -1.42
SF3B1-202ENST00000409915 TRPM1Q7Z4N2 1603 aa6.15□□□□□ -1.42
SF3B1-202ENST00000409915 ATF3P18847 181 aa6.15□□□□□ -1.42
SF3B1-202ENST00000409915 OSBPP22059 807 aa6.15□□□□□ -1.42
SF3B1-202ENST00000409915 HSPA1LP34931 641 aa6.15□□□□□ -1.42
SF3B1-202ENST00000409915 DNAJC14Q6Y2X3 702 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-202ENST00000409915 BCL2L13Q9BXK5 485 aa6.15□□□□□ -1.42
SF3B1-202ENST00000409915 C19orf44Q9H6X5 657 aa6.15□□□□□ -1.42
SF3B1-202ENST00000409915 ARHGEF28Q8N1W1 1705 aaKnown RBP6.15□□□□□ -1.42
SF3B1-202ENST00000409915 DCCP43146 1447 aa6.15□□□□□ -1.43
SF3B1-202ENST00000409915 NCOA3Q9Y6Q9 1424 aa6.15□□□□□ -1.43
SF3B1-202ENST00000409915 DLC1Q96QB1 1528 aa6.15□□□□□ -1.43
SF3B1-202ENST00000409915 CDC42BPGQ6DT37 1551 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 TAF7LQ5H9L4 462 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 CC2D2BQ6DHV5 1058 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 B4GALNT3Q6L9W6 998 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 ADAMTS19Q8TE59 1207 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 SIRT1Q96EB6 747 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 HIRIP3Q9BW71 556 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-202ENST00000409915 SLC4A5Q9BY07 1137 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 POGKQ9P215 609 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 SLAIN2Q9P270 581 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 FAM198AQ9UFP1 575 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 ROCK2O75116 1388 aaKnown RBP6.14□□□□□ -1.43
SF3B1-202ENST00000409915 FAM135BQ49AJ0 1406 aa6.14□□□□□ -1.43
SF3B1-202ENST00000409915 KIAA1210Q9ULL0 1709 aa6.13□□□□□ -1.43
SF3B1-202ENST00000409915 MAP3K7O43318 606 aa6.13□□□□□ -1.43
SF3B1-202ENST00000409915 ZC3H6P61129 1189 aaKnown RBP6.13□□□□□ -1.43
SF3B1-202ENST00000409915 MRPL50Q8N5N7 158 aaKnown RBP6.13□□□□□ -1.43
SF3B1-202ENST00000409915 DDX17Q92841 729 aaKnown RBP6.13□□□□□ -1.43
SF3B1-202ENST00000409915 PKNOX2Q96KN3 472 aa6.13□□□□□ -1.43
SF3B1-202ENST00000409915 EPAS1Q99814 870 aa6.13□□□□□ -1.43
SF3B1-202ENST00000409915 PPP1R12CQ9BZL4 782 aa6.13□□□□□ -1.43
SF3B1-202ENST00000409915 TSKSQ9UJT2 592 aa6.13□□□□□ -1.43
SF3B1-202ENST00000409915 C1orf167Q5SNV9 1468 aa6.13□□□□□ -1.43
SF3B1-202ENST00000409915 RALGAPBQ86X10 1494 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms