RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 TJP1Q07157 1748 aa24.18■■□□□ 1.46
ITM2C-204ENST00000409704 AKAP4Q5JQC9 854 aa24.17■■□□□ 1.46
ITM2C-204ENST00000409704 COL23A1Q86Y22 540 aaPredicted RBP24.17■■□□□ 1.46
ITM2C-204ENST00000409704 LINC00116Q8NCU8 138 aa24.17■■□□□ 1.46
ITM2C-204ENST00000409704 AK7Q96M32 723 aa24.17■■□□□ 1.46
ITM2C-204ENST00000409704 CABP4P57796 275 aa24.16■■□□□ 1.46
ITM2C-204ENST00000409704 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
ITM2C-204ENST00000409704 ITPK1Q13572 414 aa24.15■■□□□ 1.46
ITM2C-204ENST00000409704 ARXQ96QS3 562 aa24.15■■□□□ 1.46
ITM2C-204ENST00000409704 FHDC1Q9C0D6 1143 aaPredicted RBP24.15■■□□□ 1.46
ITM2C-204ENST00000409704 U2SURPO15042 1029 aaKnown RBP24.14■■□□□ 1.45
ITM2C-204ENST00000409704 MSH5O43196 834 aa24.13■■□□□ 1.45
ITM2C-204ENST00000409704 PPP2R1AP30153 589 aa24.13■■□□□ 1.45
ITM2C-204ENST00000409704 ATP6V1AP38606 617 aa24.13■■□□□ 1.45
ITM2C-204ENST00000409704 AMIGO3Q86WK7 504 aa24.13■■□□□ 1.45
ITM2C-204ENST00000409704 FLAD1Q8NFF5 587 aa24.13■■□□□ 1.45
ITM2C-204ENST00000409704 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
ITM2C-204ENST00000409704 POLD1P28340 1107 aa24.12■■□□□ 1.45
ITM2C-204ENST00000409704 C4AP0C0L4 1744 aa24.11■■□□□ 1.45
ITM2C-204ENST00000409704 MTHFSDQ2M296 383 aaKnown RBP24.11■■□□□ 1.45
ITM2C-204ENST00000409704 SLC4A9Q96Q91 983 aa24.11■■□□□ 1.45
ITM2C-204ENST00000409704 SIPA1L3O60292 1781 aaPredicted RBP24.11■■□□□ 1.45
ITM2C-204ENST00000409704 UBR2Q8IWV8 1755 aa24.11■■□□□ 1.45
ITM2C-204ENST00000409704 SYT17Q9BSW7 474 aa24.1■■□□□ 1.45
ITM2C-204ENST00000409704 RBM42Q9BTD8 480 aaKnown RBP24.1■■□□□ 1.45
ITM2C-204ENST00000409704 PHF14O94880 888 aa24.09■■□□□ 1.45
ITM2C-204ENST00000409704 SSFA2P28290 1259 aa24.09■■□□□ 1.45
ITM2C-204ENST00000409704 NFATC2IPQ8NCF5 419 aa24.09■■□□□ 1.45
ITM2C-204ENST00000409704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.08■■□□□ 1.45
ITM2C-204ENST00000409704 RNMTO43148 476 aaKnown RBP24.08■■□□□ 1.45
ITM2C-204ENST00000409704 MSL1Q68DK7 614 aa24.08■■□□□ 1.45
ITM2C-204ENST00000409704 SLC52A2Q9HAB3 445 aa24.08■■□□□ 1.45
ITM2C-204ENST00000409704 MYH14Q7Z406 1995 aaKnown RBP24.08■■□□□ 1.45
ITM2C-204ENST00000409704 KCPQ6ZWJ8 1503 aa24.08■■□□□ 1.45
ITM2C-204ENST00000409704 GNPATO15228 680 aa24.07■■□□□ 1.44
ITM2C-204ENST00000409704 SMIM5Q71RC9 77 aa24.07■■□□□ 1.44
ITM2C-204ENST00000409704 LGR6Q9HBX8 967 aa24.07■■□□□ 1.44
ITM2C-204ENST00000409704 CNTNAP4Q9C0A0 1308 aa24.06■■□□□ 1.44
ITM2C-204ENST00000409704 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
ITM2C-204ENST00000409704 PTCD1O75127 700 aaKnown RBP24.04■■□□□ 1.44
ITM2C-204ENST00000409704 GAS2L2Q8NHY3 880 aa24.04■■□□□ 1.44
ITM2C-204ENST00000409704 NUDCQ9Y266 331 aa24.04■■□□□ 1.44
ITM2C-204ENST00000409704 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
ITM2C-204ENST00000409704 DCAF8L1A6NGE4 600 aa24.02■■□□□ 1.44
ITM2C-204ENST00000409704 KLHL34Q8N239 644 aa24.02■■□□□ 1.44
ITM2C-204ENST00000409704 RC3H1Q5TC82 1133 aaKnown RBP24.01■■□□□ 1.43
ITM2C-204ENST00000409704 U2AF1L5P0DN76 240 aaPredicted RBP23.99■■□□□ 1.43
ITM2C-204ENST00000409704 U2AF1Q01081 240 aaKnown RBP eCLIP23.99■■□□□ 1.43
ITM2C-204ENST00000409704 RTCBQ9Y3I0 505 aaKnown RBP23.99■■□□□ 1.43
ITM2C-204ENST00000409704 GNAT3A8MTJ3 354 aa23.98■■□□□ 1.43
ITM2C-204ENST00000409704 PHACTR3Q96KR7 559 aa23.98■■□□□ 1.43
ITM2C-204ENST00000409704 SLC39A6Q13433 755 aa23.97■■□□□ 1.43
ITM2C-204ENST00000409704 NLGN2Q8NFZ4 835 aa23.97■■□□□ 1.43
ITM2C-204ENST00000409704 CEMIPQ8WUJ3 1361 aa23.97■■□□□ 1.43
ITM2C-204ENST00000409704 ADRA2BP18089 450 aa23.96■■□□□ 1.43
ITM2C-204ENST00000409704 CRKLP46109 303 aaKnown RBP23.96■■□□□ 1.43
ITM2C-204ENST00000409704 DLG5Q8TDM6 1919 aa23.95■■□□□ 1.42
ITM2C-204ENST00000409704 RPS6KA4O75676 772 aa23.95■■□□□ 1.42
ITM2C-204ENST00000409704 IL17REQ8NFR9 667 aa23.95■■□□□ 1.42
ITM2C-204ENST00000409704 KIF13BQ9NQT8 1826 aa23.95■■□□□ 1.42
ITM2C-204ENST00000409704 CHD4Q14839 1912 aa23.94■■□□□ 1.42
ITM2C-204ENST00000409704 UTRNP46939 3433 aa23.94■■□□□ 1.42
ITM2C-204ENST00000409704 FCHSD2O94868 740 aa23.94■■□□□ 1.42
ITM2C-204ENST00000409704 TEFQ10587 303 aa23.93■■□□□ 1.42
ITM2C-204ENST00000409704 TRAPPC3LQ5T215 181 aa23.93■■□□□ 1.42
ITM2C-204ENST00000409704 DNAJC10Q8IXB1 793 aa23.93■■□□□ 1.42
ITM2C-204ENST00000409704 DDX10Q13206 875 aaKnown RBP23.92■■□□□ 1.42
ITM2C-204ENST00000409704 ARHGEF1Q92888 912 aaKnown RBP23.92■■□□□ 1.42
ITM2C-204ENST00000409704 KIAA1551Q9HCM1 1747 aa23.92■■□□□ 1.42
ITM2C-204ENST00000409704 RALBP1Q15311 655 aa23.9■■□□□ 1.42
ITM2C-204ENST00000409704 INTS5Q6P9B9 1019 aaKnown RBP23.9■■□□□ 1.42
ITM2C-204ENST00000409704 TTC5Q8N0Z6 440 aa23.9■■□□□ 1.42
ITM2C-204ENST00000409704 CD2APQ9Y5K6 639 aa23.9■■□□□ 1.42
ITM2C-204ENST00000409704 GOLGB1Q14789 3259 aaKnown RBP23.89■■□□□ 1.42
ITM2C-204ENST00000409704 YY1P25490 414 aa23.89■■□□□ 1.41
ITM2C-204ENST00000409704 VSIG10Q8N0Z9 540 aa23.89■■□□□ 1.41
ITM2C-204ENST00000409704 CCDC87Q9NVE4 849 aa23.89■■□□□ 1.41
ITM2C-204ENST00000409704 CYP19A1P11511 503 aaPredicted RBP23.88■■□□□ 1.41
ITM2C-204ENST00000409704 GYS1P13807 737 aa23.88■■□□□ 1.41
ITM2C-204ENST00000409704 RFC4P35249 363 aa23.88■■□□□ 1.41
ITM2C-204ENST00000409704 SOS1Q07889 1333 aaPredicted RBP23.87■■□□□ 1.41
ITM2C-204ENST00000409704 USP42Q9H9J4 1324 aaKnown RBP23.87■■□□□ 1.41
ITM2C-204ENST00000409704 SCN7AQ01118 1682 aa23.87■■□□□ 1.41
ITM2C-204ENST00000409704 MMP10P09238 476 aa23.87■■□□□ 1.41
ITM2C-204ENST00000409704 ZNF790Q6PG37 636 aa23.87■■□□□ 1.41
ITM2C-204ENST00000409704 HEG1Q9ULI3 1381 aa23.87■■□□□ 1.41
ITM2C-204ENST00000409704 C10orf71Q711Q0 1435 aa23.86■■□□□ 1.41
ITM2C-204ENST00000409704 GPR162Q16538 588 aa23.86■■□□□ 1.41
ITM2C-204ENST00000409704 COL15A1P39059 1388 aa23.86■■□□□ 1.41
ITM2C-204ENST00000409704 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
ITM2C-204ENST00000409704 NLGN1Q8N2Q7 840 aa23.85■■□□□ 1.41
ITM2C-204ENST00000409704 ZNF496Q96IT1 587 aaPredicted RBP23.85■■□□□ 1.41
ITM2C-204ENST00000409704 ZBTB1Q9Y2K1 713 aa23.85■■□□□ 1.41
ITM2C-204ENST00000409704 KDM3BQ7LBC6 1761 aa23.85■■□□□ 1.41
ITM2C-204ENST00000409704 MYBBP1AQ9BQG0 1328 aaKnown RBP23.84■■□□□ 1.41
ITM2C-204ENST00000409704 MCM10Q7L590 875 aa23.84■■□□□ 1.41
ITM2C-204ENST00000409704 RTF1Q92541 710 aaKnown RBP23.84■■□□□ 1.41
ITM2C-204ENST00000409704 SRP68Q9UHB9 627 aaKnown RBP23.84■■□□□ 1.41
ITM2C-204ENST00000409704 LAMB4A4D0S4 1761 aa23.83■■□□□ 1.41
ITM2C-204ENST00000409704 PLEKHF1Q96S99 279 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms