RNA–Protein interactions for RNA: ENST00000406961.5

NCOA1-205, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NCOA1, Length 7,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-205ENST00000406961 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
NCOA1-205ENST00000406961 NAP1L1P55209 391 aaKnown RBP18.95■□□□□ 0.62
NCOA1-205ENST00000406961 UBAC1Q9BSL1 405 aa18.95■□□□□ 0.62
NCOA1-205ENST00000406961 ZNF652Q9Y2D9 606 aa18.95■□□□□ 0.62
NCOA1-205ENST00000406961 TNMDQ9H2S6 317 aa18.94■□□□□ 0.62
NCOA1-205ENST00000406961 TTC21AQ8NDW8 1320 aa18.94■□□□□ 0.62
NCOA1-205ENST00000406961 IFNL2Q8IZJ0 200 aa18.94■□□□□ 0.62
NCOA1-205ENST00000406961 SF3B2Q13435 895 aaKnown RBP18.94■□□□□ 0.62
NCOA1-205ENST00000406961 EPS15P42566 896 aa18.94■□□□□ 0.62
NCOA1-205ENST00000406961 ADAMTS2O95450 1211 aa18.94■□□□□ 0.62
NCOA1-205ENST00000406961 CCDC192P0DO97 292 aa18.93■□□□□ 0.62
NCOA1-205ENST00000406961 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
NCOA1-205ENST00000406961 CCDC173Q0VFZ6 552 aa18.93■□□□□ 0.62
NCOA1-205ENST00000406961 SPATA32Q96LK8 384 aa18.93■□□□□ 0.62
NCOA1-205ENST00000406961 MNS1Q8NEH6 495 aa18.93■□□□□ 0.62
NCOA1-205ENST00000406961 MAP3K2Q9Y2U5 619 aa18.93■□□□□ 0.62
NCOA1-205ENST00000406961 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
NCOA1-205ENST00000406961 IFIT1P09914 478 aaKnown RBP18.92■□□□□ 0.62
NCOA1-205ENST00000406961 HSP90AB2PQ58FF8 381 aa18.92■□□□□ 0.62
NCOA1-205ENST00000406961 MCM4P33991 863 aa18.92■□□□□ 0.62
NCOA1-205ENST00000406961 PARD3Q8TEW0 1356 aa18.92■□□□□ 0.62
NCOA1-205ENST00000406961 FAM13BQ9NYF5 915 aa18.92■□□□□ 0.62
NCOA1-205ENST00000406961 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.62
NCOA1-205ENST00000406961 PPP1R1BQ9UD71 204 aaPredicted RBP18.91■□□□□ 0.62
NCOA1-205ENST00000406961 IFIT5Q13325 482 aaKnown RBP18.91■□□□□ 0.62
NCOA1-205ENST00000406961 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
NCOA1-205ENST00000406961 PIK3R4Q99570 1358 aa18.91■□□□□ 0.62
NCOA1-205ENST00000406961 A0A087WZG4 1122 aa18.91■□□□□ 0.62
NCOA1-205ENST00000406961 ABCF2Q9UG63 623 aa18.91■□□□□ 0.62
NCOA1-205ENST00000406961 TRMT112Q9UI30 125 aaKnown RBP18.91■□□□□ 0.62
NCOA1-205ENST00000406961 FILIP1LQ4L180 1135 aa18.9■□□□□ 0.62
NCOA1-205ENST00000406961 UPF3BQ9BZI7 483 aaKnown RBP18.9■□□□□ 0.62
NCOA1-205ENST00000406961 EIF2AK4Q9P2K8 1649 aaKnown RBP18.9■□□□□ 0.62
NCOA1-205ENST00000406961 IGHDP01880 384 aa18.9■□□□□ 0.62
NCOA1-205ENST00000406961 SOGA3Q5TF21 947 aa18.9■□□□□ 0.62
NCOA1-205ENST00000406961 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
NCOA1-205ENST00000406961 EIF4G3O43432 1585 aaKnown RBP18.9■□□□□ 0.62
NCOA1-205ENST00000406961 ZBTB3Q9H5J0 574 aa18.89■□□□□ 0.62
NCOA1-205ENST00000406961 PRM3Q9NNZ6 103 aa18.89■□□□□ 0.62
NCOA1-205ENST00000406961 R3HCC1Q9Y3T6 440 aaKnown RBP18.89■□□□□ 0.62
NCOA1-205ENST00000406961 ZPR1O75312 459 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 MAGEC2Q9UBF1 373 aaPredicted RBP18.89■□□□□ 0.61
NCOA1-205ENST00000406961 CFAP45Q9UL16 551 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 U3KPZ7 1027 aaPredicted RBP18.89■□□□□ 0.61
NCOA1-205ENST00000406961 EXOC5O00471 708 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 OFD1O75665 1012 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 CCDC83Q8IWF9 413 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 DDX11Q96FC9 970 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 KRT18P05783 430 aaKnown RBP18.89■□□□□ 0.61
NCOA1-205ENST00000406961 CHRNA2Q15822 529 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 TESK2Q96S53 571 aa18.89■□□□□ 0.61
NCOA1-205ENST00000406961 PIP4K2AP48426 406 aaPredicted RBP18.88■□□□□ 0.61
NCOA1-205ENST00000406961 BRPF3Q9ULD4 1205 aa18.88■□□□□ 0.61
NCOA1-205ENST00000406961 CAVIN4Q5BKX8 364 aa18.87■□□□□ 0.61
NCOA1-205ENST00000406961 GRPEL1Q9HAV7 217 aa18.87■□□□□ 0.61
NCOA1-205ENST00000406961 SPC24Q8NBT2 197 aa18.87■□□□□ 0.61
NCOA1-205ENST00000406961 ARHGAP45Q92619 1136 aa18.87■□□□□ 0.61
NCOA1-205ENST00000406961 POLR3AO14802 1390 aaPredicted RBP18.87■□□□□ 0.61
NCOA1-205ENST00000406961 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
NCOA1-205ENST00000406961 TNNT3P45378 269 aaPredicted RBP18.87■□□□□ 0.61
NCOA1-205ENST00000406961 CCAR1Q8IX12 1150 aaKnown RBP18.87■□□□□ 0.61
NCOA1-205ENST00000406961 PI4KAP1Q8N8J0 262 aa18.87■□□□□ 0.61
NCOA1-205ENST00000406961 WASF1Q92558 559 aa18.87■□□□□ 0.61
NCOA1-205ENST00000406961 BRPF1P55201 1214 aaPredicted RBP18.87■□□□□ 0.61
NCOA1-205ENST00000406961 PDIA4P13667 645 aaKnown RBP18.87■□□□□ 0.61
NCOA1-205ENST00000406961 ANKRD18BA2A2Z9 1011 aa18.86■□□□□ 0.61
NCOA1-205ENST00000406961 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
NCOA1-205ENST00000406961 DACH1Q9UI36 760 aa18.86■□□□□ 0.61
NCOA1-205ENST00000406961 PUS7Q96PZ0 661 aaKnown RBP18.86■□□□□ 0.61
NCOA1-205ENST00000406961 ARGLU1Q9NWB6 273 aaPredicted RBP18.86■□□□□ 0.61
NCOA1-205ENST00000406961 SERPINC1P01008 464 aa18.86■□□□□ 0.61
NCOA1-205ENST00000406961 SMARCE1Q969G3 411 aa18.85■□□□□ 0.61
NCOA1-205ENST00000406961 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
NCOA1-205ENST00000406961 BCL11BQ9C0K0 894 aaPredicted RBP18.85■□□□□ 0.61
NCOA1-205ENST00000406961 TEX13AQ9BXU3 409 aaPredicted RBP18.85■□□□□ 0.61
NCOA1-205ENST00000406961 DISP1Q96F81 1524 aa18.85■□□□□ 0.61
NCOA1-205ENST00000406961 PPP1R42Q7Z4L9 355 aa18.85■□□□□ 0.61
NCOA1-205ENST00000406961 NUP62CLQ9H1M0 184 aa18.85■□□□□ 0.61
NCOA1-205ENST00000406961 CT47A1Q5JQC4 288 aaPredicted RBP18.85■□□□□ 0.61
NCOA1-205ENST00000406961 ECHDC1Q9NTX5 307 aa18.85■□□□□ 0.61
NCOA1-205ENST00000406961 POLKQ9UBT6 870 aa18.85■□□□□ 0.61
NCOA1-205ENST00000406961 GPTP24298 496 aa18.85■□□□□ 0.61
NCOA1-205ENST00000406961 BMP2KLQ5H9B9 411 aa18.85■□□□□ 0.61
NCOA1-205ENST00000406961 ZSCAN29Q8IWY8 852 aaPredicted RBP18.85■□□□□ 0.61
NCOA1-205ENST00000406961 ATP5J2-PTCD1G3V325 749 aa18.84■□□□□ 0.61
NCOA1-205ENST00000406961 SLC5A1P13866 664 aa18.84■□□□□ 0.61
NCOA1-205ENST00000406961 TTLL5Q6EMB2 1281 aa18.84■□□□□ 0.61
NCOA1-205ENST00000406961 KIF21AQ7Z4S6 1674 aa18.84■□□□□ 0.61
NCOA1-205ENST00000406961 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
NCOA1-205ENST00000406961 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
NCOA1-205ENST00000406961 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
NCOA1-205ENST00000406961 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
NCOA1-205ENST00000406961 ANXA1P04083 346 aa18.83■□□□□ 0.61
NCOA1-205ENST00000406961 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.61
NCOA1-205ENST00000406961 TBC1D9Q6ZT07 1266 aa18.83■□□□□ 0.61
NCOA1-205ENST00000406961 CWC25Q9NXE8 425 aaPredicted RBP18.83■□□□□ 0.61
NCOA1-205ENST00000406961 FERMT3Q86UX7 667 aa18.83■□□□□ 0.61
NCOA1-205ENST00000406961 MAP3K12Q12852 859 aa18.83■□□□□ 0.6
NCOA1-205ENST00000406961 PZPP20742 1482 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms