RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 GOLGA6L19H0YKK7 550 aa7.1□□□□□ -1.27
HDAC9-203ENST00000406072 HOMER1Q86YM7 354 aa7.1□□□□□ -1.27
HDAC9-203ENST00000406072 COL16A1Q07092 1604 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-203ENST00000406072 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.1□□□□□ -1.27
HDAC9-203ENST00000406072 APAF1O14727 1248 aa7.09□□□□□ -1.27
HDAC9-203ENST00000406072 WAPLQ7Z5K2 1190 aa7.09□□□□□ -1.27
HDAC9-203ENST00000406072 PDZRN3Q9UPQ7 1066 aa7.09□□□□□ -1.27
HDAC9-203ENST00000406072 NWD2Q9ULI1 1742 aa7.09□□□□□ -1.27
HDAC9-203ENST00000406072 BECN2A8MW95 431 aa7.09□□□□□ -1.27
HDAC9-203ENST00000406072 MBD3O95983 291 aa7.09□□□□□ -1.27
HDAC9-203ENST00000406072 CICQ96RK0 1608 aaPredicted RBP7.09□□□□□ -1.28
HDAC9-203ENST00000406072 NUTM2DQ5VT03 806 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-203ENST00000406072 MNS1Q8NEH6 495 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 LNPKQ9C0E8 428 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 C19orf44Q9H6X5 657 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 OVOS2A0A0G2JMS6 1433 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 ROBO1Q9Y6N7 1651 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 CABP2Q9NPB3 220 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 CIZ1Q9ULV3 898 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-203ENST00000406072 SIPA1L3O60292 1781 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-203ENST00000406072 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
HDAC9-203ENST00000406072 N4BP2Q86UW6 1770 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-203ENST00000406072 NRAPQ86VF7 1730 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 MINK1Q8N4C8 1332 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-203ENST00000406072 FYB1O15117 783 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 TPM3P06753 285 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 SKIDA1Q1XH10 827 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 TNS3Q68CZ2 1445 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 ARHGEF10O15013 1369 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 TTC21BQ7Z4L5 1316 aa7.08□□□□□ -1.28
HDAC9-203ENST00000406072 RRP7AQ9Y3A4 280 aaKnown RBP7.08□□□□□ -1.28
HDAC9-203ENST00000406072 CPDO75976 1380 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 TMEM94Q12767 1356 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 ZNF521Q96K83 1311 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 MCM5P33992 734 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 CCDC27Q2M243 656 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 C20orf194Q5TEA3 1177 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 TNPO1Q92973 898 aaKnown RBP7.07□□□□□ -1.28
HDAC9-203ENST00000406072 SLC12A5Q9H2X9 1139 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 SYCE3A1L190 88 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 TRIM6-TRIM34B2RNG4 842 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 GTF2F1P35269 517 aaKnown RBP eCLIP7.07□□□□□ -1.28
HDAC9-203ENST00000406072 LEKR1Q6ZMV7 388 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 NOC3LQ8WTT2 800 aaKnown RBP7.07□□□□□ -1.28
HDAC9-203ENST00000406072 TRIM34Q9BYJ4 488 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 MSH6P52701 1360 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 RBM25P49756 843 aaKnown RBP7.07□□□□□ -1.28
HDAC9-203ENST00000406072 IPO4Q8TEX9 1081 aaKnown RBP7.07□□□□□ -1.28
HDAC9-203ENST00000406072 ATP6V1DQ9Y5K8 247 aa7.07□□□□□ -1.28
HDAC9-203ENST00000406072 KDRP35968 1356 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 GTF2A1P52655 376 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-203ENST00000406072 ZKSCAN2Q63HK3 967 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 PRIMPOLQ96LW4 560 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 SLC26A8Q96RN1 970 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 H0YHG0 523 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 TNNT1P13805 278 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 ADRA2BP18089 450 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 SRPK2P78362 688 aaKnown RBP7.06□□□□□ -1.28
HDAC9-203ENST00000406072 TRIM5Q9C035 493 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 CABP1Q9NZU7 370 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 ACEP12821 1306 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 LRP6O75581 1613 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 PAPPAQ13219 1627 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 HSP90B2PQ58FF3 399 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 MORC1Q86VD1 984 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 AK7Q96M32 723 aa7.06□□□□□ -1.28
HDAC9-203ENST00000406072 U2AF1L5P0DN76 240 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-203ENST00000406072 TPM4P67936 248 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 U2AF1Q01081 240 aaKnown RBP eCLIP7.05□□□□□ -1.28
HDAC9-203ENST00000406072 GORABQ5T7V8 394 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 STK26Q9P289 416 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 DLG5Q8TDM6 1919 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 FAM177BA6PVY3 158 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 BCAR3O75815 825 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 RDXP35241 583 aaKnown RBP7.05□□□□□ -1.28
HDAC9-203ENST00000406072 HSP90AB3PQ58FF7 597 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 ZKSCAN5Q9Y2L8 839 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 VIRMAQ69YN4 1812 aaKnown RBP7.05□□□□□ -1.28
HDAC9-203ENST00000406072 SHANK3Q9BYB0 1731 aa7.05□□□□□ -1.28
HDAC9-203ENST00000406072 K7ELQ4 463 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-203ENST00000406072 CADPS2Q86UW7 1296 aa7.04□□□□□ -1.28
HDAC9-203ENST00000406072 ADAMTS8Q9UP79 889 aa7.04□□□□□ -1.28
HDAC9-203ENST00000406072 KDM3BQ7LBC6 1761 aa7.04□□□□□ -1.28
HDAC9-203ENST00000406072 PHLPP1O60346 1717 aa7.04□□□□□ -1.28
HDAC9-203ENST00000406072 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-203ENST00000406072 DZIP1LQ8IYY4 767 aaKnown RBP7.04□□□□□ -1.28
HDAC9-203ENST00000406072 SOS2Q07890 1332 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-203ENST00000406072 RNF123Q5XPI4 1314 aa7.04□□□□□ -1.28
HDAC9-203ENST00000406072 POLR3GO15318 223 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-203ENST00000406072 C8orf34Q49A92 452 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 MRC1P22897 1456 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 ZNF831Q5JPB2 1677 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 FLT4P35916 1363 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 REC8O95072 547 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 SSFA2P28290 1259 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 TRMT2AQ8IZ69 625 aaKnown RBP7.03□□□□□ -1.28
HDAC9-203ENST00000406072 TOMM22Q9NS69 142 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 TERF1P54274 439 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 CERS3Q8IU89 383 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 ZNF830Q96NB3 372 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms