RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
SMS-202ENST00000404933 NHSL1Q5SYE7 1610 aa14.92□□□□□ -0.02
SMS-202ENST00000404933 RNMTO43148 476 aaKnown RBP14.92□□□□□ -0.02
SMS-202ENST00000404933 CHMP4AQ9BY43 222 aa14.92□□□□□ -0.02
SMS-202ENST00000404933 TATP17735 454 aaPredicted RBP14.91□□□□□ -0.02
SMS-202ENST00000404933 CHRNA2Q15822 529 aa14.91□□□□□ -0.02
SMS-202ENST00000404933 MPRIPQ6WCQ1 1025 aa14.91□□□□□ -0.02
SMS-202ENST00000404933 SMC5Q8IY18 1101 aa14.91□□□□□ -0.02
SMS-202ENST00000404933 ADAMTS7Q9UKP4 1686 aa14.91□□□□□ -0.02
SMS-202ENST00000404933 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.9□□□□□ -0.021e-6■□□□□ 9.8
SMS-202ENST00000404933 HOXB7P09629 217 aa14.89□□□□□ -0.03
SMS-202ENST00000404933 SPG7Q9UQ90 795 aa14.89□□□□□ -0.03
SMS-202ENST00000404933 SIPA1L3O60292 1781 aaPredicted RBP14.89□□□□□ -0.03
SMS-202ENST00000404933 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
SMS-202ENST00000404933 BTBD11A6QL63 1104 aa14.89□□□□□ -0.03
SMS-202ENST00000404933 EIF4A1P60842 406 aaKnown RBP14.88□□□□□ -0.03
SMS-202ENST00000404933 G2E3Q7L622 706 aa14.88□□□□□ -0.03
SMS-202ENST00000404933 SCN11AQ9UI33 1791 aa14.87□□□□□ -0.03
SMS-202ENST00000404933 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
SMS-202ENST00000404933 C8orf34Q49A92 452 aa14.87□□□□□ -0.03
SMS-202ENST00000404933 HDGFL1Q5TGJ6 251 aa14.87□□□□□ -0.03
SMS-202ENST00000404933 PRDM11Q9NQV5 511 aa14.87□□□□□ -0.03
SMS-202ENST00000404933 MEGF6O75095 1541 aa14.87□□□□□ -0.03
SMS-202ENST00000404933 FLIIQ13045 1269 aa14.87□□□□□ -0.03
SMS-202ENST00000404933 GCC1Q96CN9 775 aa14.87□□□□□ -0.03
SMS-202ENST00000404933 PKD1L3Q7Z443 1732 aa14.87□□□□□ -0.03
SMS-202ENST00000404933 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
SMS-202ENST00000404933 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
SMS-202ENST00000404933 N4BP2Q86UW6 1770 aaPredicted RBP14.85□□□□□ -0.03
SMS-202ENST00000404933 NUCB1Q02818 461 aa14.85□□□□□ -0.03
SMS-202ENST00000404933 FKBP5Q13451 457 aaPredicted RBP14.85□□□□□ -0.03
SMS-202ENST00000404933 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
SMS-202ENST00000404933 NECTIN2Q92692 538 aa14.85□□□□□ -0.03
SMS-202ENST00000404933 WDR17Q8IZU2 1322 aa14.84□□□□□ -0.03
SMS-202ENST00000404933 PARP4Q9UKK3 1724 aaKnown RBP14.84□□□□□ -0.03
SMS-202ENST00000404933 PHKG2P15735 406 aa14.84□□□□□ -0.03
SMS-202ENST00000404933 KCNQ3O43525 872 aa14.83□□□□□ -0.04
SMS-202ENST00000404933 NBR1Q14596 966 aa14.83□□□□□ -0.04
SMS-202ENST00000404933 SLC4A10Q6U841 1118 aa14.83□□□□□ -0.04
SMS-202ENST00000404933 SIRT2Q8IXJ6 389 aa14.83□□□□□ -0.04
SMS-202ENST00000404933 RPAP2Q8IXW5 612 aaPredicted RBP14.83□□□□□ -0.04
SMS-202ENST00000404933 PXDNLA1KZ92 1463 aa14.83□□□□□ -0.04
SMS-202ENST00000404933 COL5A2P05997 1499 aaPredicted RBP14.83□□□□□ -0.04
SMS-202ENST00000404933 F6X3S4 739 aa14.82□□□□□ -0.04
SMS-202ENST00000404933 HSP90AB1P08238 724 aaKnown RBP14.82□□□□□ -0.04
SMS-202ENST00000404933 KDM6AO15550 1401 aaPredicted RBP14.82□□□□□ -0.04
SMS-202ENST00000404933 EIF2S2P20042 333 aaKnown RBP14.82□□□□□ -0.04
SMS-202ENST00000404933 NPM2Q86SE8 214 aaKnown RBP14.82□□□□□ -0.04
SMS-202ENST00000404933 ANKRD44Q8N8A2 993 aa14.82□□□□□ -0.04
SMS-202ENST00000404933 HEG1Q9ULI3 1381 aa14.82□□□□□ -0.04
SMS-202ENST00000404933 TOM1L2Q6ZVM7 507 aa14.81□□□□□ -0.04
SMS-202ENST00000404933 CHD1LQ86WJ1 897 aa14.81□□□□□ -0.04
SMS-202ENST00000404933 DCAF5Q96JK2 942 aa14.81□□□□□ -0.04
SMS-202ENST00000404933 MEIS3Q99687 375 aa14.81□□□□□ -0.04
SMS-202ENST00000404933 SLC52A2Q9HAB3 445 aa14.81□□□□□ -0.04
SMS-202ENST00000404933 ATP10DQ9P241 1426 aa14.81□□□□□ -0.04
SMS-202ENST00000404933 ROBO1Q9Y6N7 1651 aa14.81□□□□□ -0.04
SMS-202ENST00000404933 MRC1P22897 1456 aa14.8□□□□□ -0.04
SMS-202ENST00000404933 GIGYF1O75420 1035 aaPredicted RBP14.8□□□□□ -0.04
SMS-202ENST00000404933 CYP27B1O15528 508 aa14.79□□□□□ -0.04
SMS-202ENST00000404933 GNAI3P08754 354 aa14.79□□□□□ -0.04
SMS-202ENST00000404933 ANKRD45Q5TZF3 282 aa14.79□□□□□ -0.04
SMS-202ENST00000404933 CEP85Q6P2H3 762 aa14.79□□□□□ -0.04
SMS-202ENST00000404933 CARD10Q9BWT7 1032 aa14.79□□□□□ -0.04
SMS-202ENST00000404933 CHPF2Q9P2E5 772 aa14.79□□□□□ -0.04
SMS-202ENST00000404933 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
SMS-202ENST00000404933 AHDC1Q5TGY3 1603 aaPredicted RBP14.79□□□□□ -0.04
SMS-202ENST00000404933 LNPKQ9C0E8 428 aa14.78□□□□□ -0.04
SMS-202ENST00000404933 DCTPP1Q9H773 170 aa14.78□□□□□ -0.04
SMS-202ENST00000404933 PHAXQ9H814 394 aaKnown RBP14.78□□□□□ -0.04
SMS-202ENST00000404933 LTBP4Q8N2S1 1624 aa14.78□□□□□ -0.04
SMS-202ENST00000404933 GNAI2P04899 355 aa14.78□□□□□ -0.04
SMS-202ENST00000404933 EVA1CP58658 441 aa14.78□□□□□ -0.04
SMS-202ENST00000404933 ZNF790Q6PG37 636 aa14.78□□□□□ -0.04
SMS-202ENST00000404933 PCDH11XQ9BZA7 1347 aa14.77□□□□□ -0.05
SMS-202ENST00000404933 PCDH11YQ9BZA8 1340 aa14.77□□□□□ -0.05
SMS-202ENST00000404933 HMMRO75330 724 aa14.77□□□□□ -0.05
SMS-202ENST00000404933 NFATC2IPQ8NCF5 419 aa14.77□□□□□ -0.05
SMS-202ENST00000404933 ZCRB1Q8TBF4 217 aaKnown RBP14.76□□□□□ -0.05
SMS-202ENST00000404933 COL22A1Q8NFW1 1626 aaPredicted RBP14.76□□□□□ -0.05
SMS-202ENST00000404933 IL2RBP14784 551 aa14.76□□□□□ -0.05
SMS-202ENST00000404933 STRN4Q9NRL3 753 aa14.76□□□□□ -0.05
SMS-202ENST00000404933 COL14A1Q05707 1796 aaKnown RBP14.75□□□□□ -0.05
SMS-202ENST00000404933 SRCIN1Q9C0H9 1055 aa14.75□□□□□ -0.05
SMS-202ENST00000404933 HYPKQ9NX55 129 aa14.75□□□□□ -0.05
SMS-202ENST00000404933 C5P01031 1676 aa14.74□□□□□ -0.05
SMS-202ENST00000404933 CABP4P57796 275 aa14.74□□□□□ -0.05
SMS-202ENST00000404933 SLC39A6Q13433 755 aa14.74□□□□□ -0.05
SMS-202ENST00000404933 LARP1Q6PKG0 1096 aaKnown RBP14.74□□□□□ -0.05
SMS-202ENST00000404933 TTC5Q8N0Z6 440 aa14.74□□□□□ -0.05
SMS-202ENST00000404933 DNAAF4Q8WXU2 420 aa14.74□□□□□ -0.05
SMS-202ENST00000404933 PI4KAP2A4QPH2 592 aa14.73□□□□□ -0.05
SMS-202ENST00000404933 PI4KAP1Q8N8J0 262 aa14.73□□□□□ -0.05
SMS-202ENST00000404933 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
SMS-202ENST00000404933 SHANK3Q9BYB0 1731 aa14.72□□□□□ -0.05
SMS-202ENST00000404933 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
SMS-202ENST00000404933 ANXA1P04083 346 aa14.72□□□□□ -0.05
SMS-202ENST00000404933 UBTFL1P0CB47 393 aaPredicted RBP14.72□□□□□ -0.05
SMS-202ENST00000404933 NKX1-1Q15270 411 aaPredicted RBP14.72□□□□□ -0.05
SMS-202ENST00000404933 USP44Q9H0E7 712 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms