RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 HMGB2P26583 209 aaKnown RBP20.89■□□□□ 0.93
TPM1-207ENST00000403994 MTHFSP49914 203 aa20.89■□□□□ 0.93
TPM1-207ENST00000403994 LINC00116Q8NCU8 138 aa20.89■□□□□ 0.93
TPM1-207ENST00000403994 AK7Q96M32 723 aa20.89■□□□□ 0.93
TPM1-207ENST00000403994 AMIGO3Q86WK7 504 aa20.88■□□□□ 0.93
TPM1-207ENST00000403994 ATG3Q9NT62 314 aa20.88■□□□□ 0.93
TPM1-207ENST00000403994 ERVV-2B6SEH9 535 aa20.87■□□□□ 0.93
TPM1-207ENST00000403994 MRC1P22897 1456 aa20.87■□□□□ 0.93
TPM1-207ENST00000403994 ADAMTS7Q9UKP4 1686 aa20.86■□□□□ 0.93
TPM1-207ENST00000403994 CHD4Q14839 1912 aa20.86■□□□□ 0.93
TPM1-207ENST00000403994 ITPK1Q13572 414 aa20.86■□□□□ 0.93
TPM1-207ENST00000403994 MSL1Q68DK7 614 aa20.86■□□□□ 0.93
TPM1-207ENST00000403994 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
TPM1-207ENST00000403994 TJP1Q07157 1748 aa20.86■□□□□ 0.93
TPM1-207ENST00000403994 YY1P25490 414 aa20.85■□□□□ 0.93
TPM1-207ENST00000403994 C1orf141Q5JVX7 400 aa20.85■□□□□ 0.93
TPM1-207ENST00000403994 KLHL34Q8N239 644 aa20.85■□□□□ 0.93
TPM1-207ENST00000403994 C4AP0C0L4 1744 aa20.84■□□□□ 0.93
TPM1-207ENST00000403994 PHF14O94880 888 aa20.83■□□□□ 0.93
TPM1-207ENST00000403994 ATP6V1AP38606 617 aa20.83■□□□□ 0.93
TPM1-207ENST00000403994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.82■□□□□ 0.92
TPM1-207ENST00000403994 SSFA2P28290 1259 aa20.82■□□□□ 0.92
TPM1-207ENST00000403994 MYH14Q7Z406 1995 aaKnown RBP20.81■□□□□ 0.92
TPM1-207ENST00000403994 DIAPH1O60610 1272 aaKnown RBP20.81■□□□□ 0.92
TPM1-207ENST00000403994 HMOX1P09601 288 aa20.81■□□□□ 0.92
TPM1-207ENST00000403994 CABP4P57796 275 aa20.81■□□□□ 0.92
TPM1-207ENST00000403994 SMIM5Q71RC9 77 aa20.81■□□□□ 0.92
TPM1-207ENST00000403994 SLC4A9Q96Q91 983 aa20.81■□□□□ 0.92
TPM1-207ENST00000403994 GNPATO15228 680 aa20.8■□□□□ 0.92
TPM1-207ENST00000403994 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
TPM1-207ENST00000403994 NLGN2Q8NFZ4 835 aa20.8■□□□□ 0.92
TPM1-207ENST00000403994 UBR2Q8IWV8 1755 aa20.78■□□□□ 0.92
TPM1-207ENST00000403994 AKAP4Q5JQC9 854 aa20.78■□□□□ 0.92
TPM1-207ENST00000403994 RBM42Q9BTD8 480 aaKnown RBP20.78■□□□□ 0.92
TPM1-207ENST00000403994 CNTNAP4Q9C0A0 1308 aa20.77■□□□□ 0.91
TPM1-207ENST00000403994 NFATC2IPQ8NCF5 419 aa20.76■□□□□ 0.91
TPM1-207ENST00000403994 SIPA1L3O60292 1781 aaPredicted RBP20.75■□□□□ 0.91
TPM1-207ENST00000403994 KCPQ6ZWJ8 1503 aa20.75■□□□□ 0.91
TPM1-207ENST00000403994 KIF13BQ9NQT8 1826 aa20.74■□□□□ 0.91
TPM1-207ENST00000403994 PTCD1O75127 700 aaKnown RBP20.73■□□□□ 0.91
TPM1-207ENST00000403994 GPR162Q16538 588 aa20.73■□□□□ 0.91
TPM1-207ENST00000403994 MTHFSDQ2M296 383 aaKnown RBP20.73■□□□□ 0.91
TPM1-207ENST00000403994 SLC52A2Q9HAB3 445 aa20.73■□□□□ 0.91
TPM1-207ENST00000403994 KIAA1551Q9HCM1 1747 aa20.73■□□□□ 0.91
TPM1-207ENST00000403994 RC3H1Q5TC82 1133 aaKnown RBP20.72■□□□□ 0.91
TPM1-207ENST00000403994 LGR6Q9HBX8 967 aa20.72■□□□□ 0.91
TPM1-207ENST00000403994 RTCBQ9Y3I0 505 aaKnown RBP20.72■□□□□ 0.91
TPM1-207ENST00000403994 U2SURPO15042 1029 aaKnown RBP20.71■□□□□ 0.91
TPM1-207ENST00000403994 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
TPM1-207ENST00000403994 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
TPM1-207ENST00000403994 CD2APQ9Y5K6 639 aa20.71■□□□□ 0.91
TPM1-207ENST00000403994 ADRA2BP18089 450 aa20.7■□□□□ 0.9
TPM1-207ENST00000403994 YBX3P16989 372 aaKnown RBP eCLIP20.69■□□□□ 0.9
TPM1-207ENST00000403994 CRKLP46109 303 aaKnown RBP20.68■□□□□ 0.9
TPM1-207ENST00000403994 RPS6KA4O75676 772 aa20.67■□□□□ 0.9
TPM1-207ENST00000403994 TRAPPC3LQ5T215 181 aa20.67■□□□□ 0.9
TPM1-207ENST00000403994 CFAP53Q96M91 514 aa20.67■□□□□ 0.9
TPM1-207ENST00000403994 MMP10P09238 476 aa20.66■□□□□ 0.9
TPM1-207ENST00000403994 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
TPM1-207ENST00000403994 ARHGEF1Q92888 912 aaKnown RBP20.66■□□□□ 0.9
TPM1-207ENST00000403994 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
TPM1-207ENST00000403994 N4BP2Q86UW6 1770 aaPredicted RBP20.65■□□□□ 0.9
TPM1-207ENST00000403994 SLC39A6Q13433 755 aa20.65■□□□□ 0.9
TPM1-207ENST00000403994 ZNF784Q8NCA9 323 aaPredicted RBP20.65■□□□□ 0.9
TPM1-207ENST00000403994 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
TPM1-207ENST00000403994 RSPH6AQ9H0K4 717 aa20.64■□□□□ 0.89
TPM1-207ENST00000403994 PXDNLA1KZ92 1463 aa20.63■□□□□ 0.89
TPM1-207ENST00000403994 BRCA1P38398 1863 aaKnown RBP20.63■□□□□ 0.89
TPM1-207ENST00000403994 GYS1P13807 737 aa20.63■□□□□ 0.89
TPM1-207ENST00000403994 RFC4P35249 363 aa20.63■□□□□ 0.89
TPM1-207ENST00000403994 DNAJC10Q8IXB1 793 aa20.63■□□□□ 0.89
TPM1-207ENST00000403994 USP42Q9H9J4 1324 aaKnown RBP20.62■□□□□ 0.89
TPM1-207ENST00000403994 PRKAR2BP31323 418 aa20.62■□□□□ 0.89
TPM1-207ENST00000403994 CEMIPQ8WUJ3 1361 aa20.61■□□□□ 0.89
TPM1-207ENST00000403994 GNAT3A8MTJ3 354 aa20.61■□□□□ 0.89
TPM1-207ENST00000403994 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
TPM1-207ENST00000403994 NLGN1Q8N2Q7 840 aa20.61■□□□□ 0.89
TPM1-207ENST00000403994 CCDC87Q9NVE4 849 aa20.61■□□□□ 0.89
TPM1-207ENST00000403994 SOS1Q07889 1333 aaPredicted RBP20.6■□□□□ 0.89
TPM1-207ENST00000403994 GRIN3BO60391 1043 aa20.6■□□□□ 0.89
TPM1-207ENST00000403994 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
TPM1-207ENST00000403994 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
TPM1-207ENST00000403994 CYP19A1P11511 503 aaPredicted RBP20.59■□□□□ 0.89
TPM1-207ENST00000403994 SRP68Q9UHB9 627 aaKnown RBP20.59■□□□□ 0.89
TPM1-207ENST00000403994 NUDCQ9Y266 331 aa20.59■□□□□ 0.89
TPM1-207ENST00000403994 COL15A1P39059 1388 aa20.59■□□□□ 0.89
TPM1-207ENST00000403994 TEFQ10587 303 aa20.58■□□□□ 0.89
TPM1-207ENST00000403994 VSIG10Q8N0Z9 540 aa20.58■□□□□ 0.89
TPM1-207ENST00000403994 IL17REQ8NFR9 667 aa20.58■□□□□ 0.89
TPM1-207ENST00000403994 DLG5Q8TDM6 1919 aa20.57■□□□□ 0.88
TPM1-207ENST00000403994 U2AF1L5P0DN76 240 aaPredicted RBP20.57■□□□□ 0.88
TPM1-207ENST00000403994 U2AF1Q01081 240 aaKnown RBP eCLIP20.57■□□□□ 0.886e-9■■■■□ 21.7
TPM1-207ENST00000403994 TTC5Q8N0Z6 440 aa20.57■□□□□ 0.88
TPM1-207ENST00000403994 WWC3Q9ULE0 1092 aa20.57■□□□□ 0.88
TPM1-207ENST00000403994 AFDNP55196 1824 aaKnown RBP20.56■□□□□ 0.88
TPM1-207ENST00000403994 ZBTB1Q9Y2K1 713 aa20.56■□□□□ 0.88
TPM1-207ENST00000403994 NRXN2Q9P2S2 1712 aa20.56■□□□□ 0.88
TPM1-207ENST00000403994 FKBP8Q14318 412 aa20.55■□□□□ 0.88
TPM1-207ENST00000403994 HEG1Q9ULI3 1381 aa20.55■□□□□ 0.88
TPM1-207ENST00000403994 DDR1Q08345 913 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms