RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MX1P20591 662 aa17.04■□□□□ 0.32
SCAF4-202ENST00000399804 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
SCAF4-202ENST00000399804 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
SCAF4-202ENST00000399804 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
SCAF4-202ENST00000399804 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
SCAF4-202ENST00000399804 DNAJC2Q99543 621 aaKnown RBP17.03■□□□□ 0.32
SCAF4-202ENST00000399804 PPP1R42Q7Z4L9 355 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 SMC5Q8IY18 1101 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 LAMC1P11047 1609 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 RABEP1Q15276 862 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 C8orf34Q49A92 452 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 NEXMIFQ5QGS0 1516 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 LRRFIP1Q32MZ4 808 aaKnown RBP17.02■□□□□ 0.32
SCAF4-202ENST00000399804 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 RNF20Q5VTR2 975 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 VWDEQ8N2E2 1590 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.31
SCAF4-202ENST00000399804 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.31
SCAF4-202ENST00000399804 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.31
SCAF4-202ENST00000399804 FRMPD1Q5SYB0 1578 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 DDX49Q9Y6V7 483 aaKnown RBP17.01■□□□□ 0.31
SCAF4-202ENST00000399804 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
SCAF4-202ENST00000399804 GSE1Q14687 1217 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
SCAF4-202ENST00000399804 AGLP35573 1532 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 STARD3NLO95772 234 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
SCAF4-202ENST00000399804 RAB11FIP3O75154 756 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 IL17REQ8NFR9 667 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 NPHP4O75161 1426 aaPredicted RBP16.99■□□□□ 0.31
SCAF4-202ENST00000399804 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
SCAF4-202ENST00000399804 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 EXOC5O00471 708 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 CLTCQ00610 1675 aaKnown RBP16.99■□□□□ 0.31
SCAF4-202ENST00000399804 A0A087WZG4 1122 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 APPP05067 770 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 TBC1D9Q6ZT07 1266 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 COPS6Q7L5N1 327 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
SCAF4-202ENST00000399804 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 WASHC4Q2M389 1173 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 CEP85Q6P2H3 762 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 CWC27Q6UX04 472 aaKnown RBP16.98■□□□□ 0.31
SCAF4-202ENST00000399804 XAGE3Q8WTP9 111 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 TMEM94Q12767 1356 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 QRICH2Q9H0J4 1663 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 PTPRMP28827 1452 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 GNL2Q13823 731 aaKnown RBP16.98■□□□□ 0.31
SCAF4-202ENST00000399804 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 NUCB2P80303 420 aa16.97■□□□□ 0.31
SCAF4-202ENST00000399804 PIK3C2BO00750 1634 aa16.97■□□□□ 0.31
SCAF4-202ENST00000399804 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
SCAF4-202ENST00000399804 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
SCAF4-202ENST00000399804 KSR2Q6VAB6 950 aa16.96■□□□□ 0.31
SCAF4-202ENST00000399804 UBE3BQ7Z3V4 1068 aa16.96■□□□□ 0.31
SCAF4-202ENST00000399804 CNNM1Q9NRU3 951 aa16.96■□□□□ 0.31
SCAF4-202ENST00000399804 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.31
SCAF4-202ENST00000399804 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.3
SCAF4-202ENST00000399804 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
SCAF4-202ENST00000399804 CEP126Q9P2H0 1117 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 SEC24BO95487 1268 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 ATP8B2P98198 1209 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 TBC1D32Q96NH3 1257 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 K7ELQ4 463 aaPredicted RBP16.95■□□□□ 0.3
SCAF4-202ENST00000399804 VPS37DQ86XT2 251 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 DCAF5Q96JK2 942 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 IGSF1Q8N6C5 1336 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 HIP1O00291 1037 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 IL2RBP14784 551 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 FAM184AQ8NB25 1140 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 SMC3Q9UQE7 1217 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 SYAP1Q96A49 352 aaPredicted RBP16.94■□□□□ 0.3
SCAF4-202ENST00000399804 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
SCAF4-202ENST00000399804 BOLA2Q9H3K6 86 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 BABAM1Q9NWV8 329 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 CWF19L2Q2TBE0 894 aaKnown RBP16.93■□□□□ 0.3
SCAF4-202ENST00000399804 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
SCAF4-202ENST00000399804 RHPN1Q8TCX5 695 aa16.93■□□□□ 0.3
SCAF4-202ENST00000399804 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
SCAF4-202ENST00000399804 PRKCSHP14314 528 aaPredicted RBP16.92■□□□□ 0.3
SCAF4-202ENST00000399804 SDSP20132 328 aa16.92■□□□□ 0.3
SCAF4-202ENST00000399804 NGLY1Q96IV0 654 aa16.92■□□□□ 0.3
SCAF4-202ENST00000399804 KCNQ3O43525 872 aa16.92■□□□□ 0.3
SCAF4-202ENST00000399804 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms