RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MX1P20591 662 aa17.04■□□□□ 0.32
SCAF4-202ENST00000399804 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
SCAF4-202ENST00000399804 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
SCAF4-202ENST00000399804 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
SCAF4-202ENST00000399804 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
SCAF4-202ENST00000399804 DNAJC2Q99543 621 aaKnown RBP17.03■□□□□ 0.32
SCAF4-202ENST00000399804 PPP1R42Q7Z4L9 355 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 SMC5Q8IY18 1101 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 LAMC1P11047 1609 aa17.03■□□□□ 0.32
SCAF4-202ENST00000399804 RABEP1Q15276 862 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 C8orf34Q49A92 452 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 NEXMIFQ5QGS0 1516 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 LRRFIP1Q32MZ4 808 aaKnown RBP17.02■□□□□ 0.32
SCAF4-202ENST00000399804 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 RNF20Q5VTR2 975 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 VWDEQ8N2E2 1590 aa17.02■□□□□ 0.32
SCAF4-202ENST00000399804 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.31
SCAF4-202ENST00000399804 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.31
SCAF4-202ENST00000399804 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.31
SCAF4-202ENST00000399804 FRMPD1Q5SYB0 1578 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 DDX49Q9Y6V7 483 aaKnown RBP17.01■□□□□ 0.31
SCAF4-202ENST00000399804 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
SCAF4-202ENST00000399804 GSE1Q14687 1217 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
SCAF4-202ENST00000399804 AGLP35573 1532 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 STARD3NLO95772 234 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
SCAF4-202ENST00000399804 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
SCAF4-202ENST00000399804 RAB11FIP3O75154 756 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 IL17REQ8NFR9 667 aa17■□□□□ 0.31
SCAF4-202ENST00000399804 NPHP4O75161 1426 aaPredicted RBP16.99■□□□□ 0.31
SCAF4-202ENST00000399804 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
SCAF4-202ENST00000399804 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 EXOC5O00471 708 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 CLTCQ00610 1675 aaKnown RBP16.99■□□□□ 0.31
SCAF4-202ENST00000399804 A0A087WZG4 1122 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 APPP05067 770 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 TBC1D9Q6ZT07 1266 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 COPS6Q7L5N1 327 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
SCAF4-202ENST00000399804 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
SCAF4-202ENST00000399804 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 WASHC4Q2M389 1173 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 CEP85Q6P2H3 762 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 CWC27Q6UX04 472 aaKnown RBP16.98■□□□□ 0.31
SCAF4-202ENST00000399804 XAGE3Q8WTP9 111 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 TMEM94Q12767 1356 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 QRICH2Q9H0J4 1663 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 PTPRMP28827 1452 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 GNL2Q13823 731 aaKnown RBP16.98■□□□□ 0.31
SCAF4-202ENST00000399804 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
SCAF4-202ENST00000399804 NUCB2P80303 420 aa16.97■□□□□ 0.31
SCAF4-202ENST00000399804 PIK3C2BO00750 1634 aa16.97■□□□□ 0.31
SCAF4-202ENST00000399804 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
SCAF4-202ENST00000399804 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
SCAF4-202ENST00000399804 KSR2Q6VAB6 950 aa16.96■□□□□ 0.31
SCAF4-202ENST00000399804 UBE3BQ7Z3V4 1068 aa16.96■□□□□ 0.31
SCAF4-202ENST00000399804 CNNM1Q9NRU3 951 aa16.96■□□□□ 0.31
SCAF4-202ENST00000399804 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.31
SCAF4-202ENST00000399804 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.3
SCAF4-202ENST00000399804 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
SCAF4-202ENST00000399804 CEP126Q9P2H0 1117 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 SEC24BO95487 1268 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 ATP8B2P98198 1209 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 TBC1D32Q96NH3 1257 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 K7ELQ4 463 aaPredicted RBP16.95■□□□□ 0.3
SCAF4-202ENST00000399804 VPS37DQ86XT2 251 aa16.95■□□□□ 0.3
SCAF4-202ENST00000399804 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 DCAF5Q96JK2 942 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 IGSF1Q8N6C5 1336 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 HIP1O00291 1037 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 IL2RBP14784 551 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 FAM184AQ8NB25 1140 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 SMC3Q9UQE7 1217 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 SYAP1Q96A49 352 aaPredicted RBP16.94■□□□□ 0.3
SCAF4-202ENST00000399804 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
SCAF4-202ENST00000399804 BOLA2Q9H3K6 86 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 BABAM1Q9NWV8 329 aa16.94■□□□□ 0.3
SCAF4-202ENST00000399804 CWF19L2Q2TBE0 894 aaKnown RBP16.93■□□□□ 0.3
SCAF4-202ENST00000399804 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
SCAF4-202ENST00000399804 RHPN1Q8TCX5 695 aa16.93■□□□□ 0.3
SCAF4-202ENST00000399804 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
SCAF4-202ENST00000399804 PRKCSHP14314 528 aaPredicted RBP16.92■□□□□ 0.3
SCAF4-202ENST00000399804 SDSP20132 328 aa16.92■□□□□ 0.3
SCAF4-202ENST00000399804 NGLY1Q96IV0 654 aa16.92■□□□□ 0.3
SCAF4-202ENST00000399804 KCNQ3O43525 872 aa16.92■□□□□ 0.3
SCAF4-202ENST00000399804 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms