RNA–Protein interactions for RNA: ENST00000399201.5

SETD4-202, Transcript of SET domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene SETD4, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD4-202ENST00000399201 NLGN1Q8N2Q7 840 aa15.08■□□□□ 0
SETD4-202ENST00000399201 LINC00116Q8NCU8 138 aa15.08■□□□□ 0
SETD4-202ENST00000399201 ZNF831Q5JPB2 1677 aa15.07■□□□□ 0
SETD4-202ENST00000399201 C16orf71Q8IYS4 520 aaPredicted RBP15.07■□□□□ 0
SETD4-202ENST00000399201 IFNL2Q8IZJ0 200 aa15.07■□□□□ 0
SETD4-202ENST00000399201 RTCBQ9Y3I0 505 aaKnown RBP15.07■□□□□ 0
SETD4-202ENST00000399201 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
SETD4-202ENST00000399201 NCAPD2Q15021 1401 aa15.07■□□□□ 0
SETD4-202ENST00000399201 TRAPPC3LQ5T215 181 aa15.06■□□□□ 0
SETD4-202ENST00000399201 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
SETD4-202ENST00000399201 BCS1LQ9Y276 419 aa15.06■□□□□ 0
SETD4-202ENST00000399201 PLEKHG2Q9H7P9 1386 aa15.06■□□□□ 0
SETD4-202ENST00000399201 PXDNLA1KZ92 1463 aa15.06■□□□□ 0
SETD4-202ENST00000399201 WDR90Q96KV7 1748 aa15.06■□□□□ 0
SETD4-202ENST00000399201 KIAA1551Q9HCM1 1747 aa15.06■□□□□ 0
SETD4-202ENST00000399201 BRCA1P38398 1863 aaKnown RBP15.06■□□□□ 0
SETD4-202ENST00000399201 AMIGO3Q86WK7 504 aa15.05■□□□□ -0
SETD4-202ENST00000399201 C4AP0C0L4 1744 aa15.05■□□□□ -0
SETD4-202ENST00000399201 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
SETD4-202ENST00000399201 EMILIN1Q9Y6C2 1016 aa15.04■□□□□ -0
SETD4-202ENST00000399201 COL5A3P25940 1745 aaPredicted RBP15.03■□□□□ -0
SETD4-202ENST00000399201 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
SETD4-202ENST00000399201 WASHC2AQ641Q2 1341 aa15.03■□□□□ -0
SETD4-202ENST00000399201 HSP90AB1P08238 724 aaKnown RBP15.03■□□□□ -0
SETD4-202ENST00000399201 ASAP1Q9ULH1 1129 aa15.03■□□□□ -0
SETD4-202ENST00000399201 PARP3Q9Y6F1 533 aa15.03■□□□□ -0
SETD4-202ENST00000399201 FCHSD2O94868 740 aa15.02■□□□□ -0
SETD4-202ENST00000399201 PHKG2P15735 406 aa15.02■□□□□ -0
SETD4-202ENST00000399201 RFC4P35249 363 aa15.02■□□□□ -0
SETD4-202ENST00000399201 ITPK1Q13572 414 aa15.02■□□□□ -0
SETD4-202ENST00000399201 SMIM5Q71RC9 77 aa15.02■□□□□ -0
SETD4-202ENST00000399201 KDM2BQ8NHM5 1336 aa15.01□□□□□ -0.01
SETD4-202ENST00000399201 RBM46Q8TBY0 533 aaKnown RBP15.01□□□□□ -0.01
SETD4-202ENST00000399201 ATG3Q9NT62 314 aa15.01□□□□□ -0.01
SETD4-202ENST00000399201 TNRC6CQ9HCJ0 1690 aaKnown RBP15□□□□□ -0.01
SETD4-202ENST00000399201 A0A0G2JLW4 131 aa15□□□□□ -0.01
SETD4-202ENST00000399201 ERVV-2B6SEH9 535 aa15□□□□□ -0.01
SETD4-202ENST00000399201 RC3H1Q5TC82 1133 aaKnown RBP15□□□□□ -0.01
SETD4-202ENST00000399201 EYA1Q99502 592 aa15□□□□□ -0.01
SETD4-202ENST00000399201 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
SETD4-202ENST00000399201 CNTNAP4Q9C0A0 1308 aa14.99□□□□□ -0.01
SETD4-202ENST00000399201 KDRP35968 1356 aa14.98□□□□□ -0.01
SETD4-202ENST00000399201 DPEP1P16444 411 aa14.98□□□□□ -0.01
SETD4-202ENST00000399201 FSTL1Q12841 308 aa14.98□□□□□ -0.01
SETD4-202ENST00000399201 DCAF5Q96JK2 942 aa14.98□□□□□ -0.01
SETD4-202ENST00000399201 NMRK2Q9NPI5 230 aa14.98□□□□□ -0.01
SETD4-202ENST00000399201 PIM2Q9P1W9 311 aa14.98□□□□□ -0.01
SETD4-202ENST00000399201 RPS6KA4O75676 772 aa14.97□□□□□ -0.01
SETD4-202ENST00000399201 DNAJC5GQ8N7S2 189 aa14.97□□□□□ -0.01
SETD4-202ENST00000399201 ARHGEF1Q92888 912 aaKnown RBP14.97□□□□□ -0.01
SETD4-202ENST00000399201 MYH14Q7Z406 1995 aaKnown RBP14.96□□□□□ -0.01
SETD4-202ENST00000399201 SBF1O95248 1867 aa14.96□□□□□ -0.01
SETD4-202ENST00000399201 GYS1P13807 737 aa14.96□□□□□ -0.01
SETD4-202ENST00000399201 PLEKHO1Q53GL0 409 aaPredicted RBP14.96□□□□□ -0.01
SETD4-202ENST00000399201 DALRD3Q5D0E6 543 aaKnown RBP14.96□□□□□ -0.01
SETD4-202ENST00000399201 C9orf131Q5VYM1 1079 aa14.96□□□□□ -0.01
SETD4-202ENST00000399201 CARD14Q9BXL6 1004 aa14.96□□□□□ -0.01
SETD4-202ENST00000399201 CABP4P57796 275 aa14.95□□□□□ -0.02
SETD4-202ENST00000399201 AMOTQ4VCS5 1084 aa14.95□□□□□ -0.02
SETD4-202ENST00000399201 KLRG1Q96E93 195 aa14.95□□□□□ -0.02
SETD4-202ENST00000399201 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
SETD4-202ENST00000399201 EIF4A2Q14240 407 aaKnown RBP14.93□□□□□ -0.02
SETD4-202ENST00000399201 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
SETD4-202ENST00000399201 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
SETD4-202ENST00000399201 RNF181Q9P0P0 153 aa14.93□□□□□ -0.02
SETD4-202ENST00000399201 ZC3H4Q9UPT8 1303 aaKnown RBP14.92□□□□□ -0.02
SETD4-202ENST00000399201 KCPQ6ZWJ8 1503 aa14.92□□□□□ -0.02
SETD4-202ENST00000399201 ZNF530Q6P9A1 599 aaPredicted RBP14.92□□□□□ -0.02
SETD4-202ENST00000399201 SMC1BQ8NDV3 1235 aa14.92□□□□□ -0.02
SETD4-202ENST00000399201 MTHFSP49914 203 aa14.91□□□□□ -0.02
SETD4-202ENST00000399201 JMYQ8N9B5 988 aa14.91□□□□□ -0.02
SETD4-202ENST00000399201 USP42Q9H9J4 1324 aaKnown RBP14.91□□□□□ -0.02
SETD4-202ENST00000399201 TNNT2P45379 298 aaPredicted RBP14.9□□□□□ -0.02
SETD4-202ENST00000399201 CRKLP46109 303 aaKnown RBP14.9□□□□□ -0.02
SETD4-202ENST00000399201 SLC4A9Q96Q91 983 aa14.9□□□□□ -0.02
SETD4-202ENST00000399201 CCDC88AQ3V6T2 1871 aa14.9□□□□□ -0.02
SETD4-202ENST00000399201 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
SETD4-202ENST00000399201 TJP1Q07157 1748 aa14.89□□□□□ -0.03
SETD4-202ENST00000399201 PTCD1O75127 700 aaKnown RBP14.89□□□□□ -0.03
SETD4-202ENST00000399201 ZPR1O75312 459 aa14.89□□□□□ -0.03
SETD4-202ENST00000399201 KCNA3P22001 575 aa14.89□□□□□ -0.03
SETD4-202ENST00000399201 RRAGCQ9HB90 399 aa14.89□□□□□ -0.03
SETD4-202ENST00000399201 VIRMAQ69YN4 1812 aaKnown RBP14.88□□□□□ -0.03
SETD4-202ENST00000399201 POLR3GLQ9BT43 218 aa14.88□□□□□ -0.03
SETD4-202ENST00000399201 KDM6AO15550 1401 aaPredicted RBP14.88□□□□□ -0.03
SETD4-202ENST00000399201 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
SETD4-202ENST00000399201 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
SETD4-202ENST00000399201 TNS4Q8IZW8 715 aa14.87□□□□□ -0.03
SETD4-202ENST00000399201 TIAM2Q8IVF5 1701 aa14.86□□□□□ -0.03
SETD4-202ENST00000399201 FKBP8Q14318 412 aa14.86□□□□□ -0.03
SETD4-202ENST00000399201 NFATC2IPQ8NCF5 419 aa14.86□□□□□ -0.03
SETD4-202ENST00000399201 SRP68Q9UHB9 627 aaKnown RBP14.86□□□□□ -0.03
SETD4-202ENST00000399201 PCNTO95613 3336 aa14.85□□□□□ -0.03
SETD4-202ENST00000399201 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
SETD4-202ENST00000399201 VEGFAP15692 232 aaPredicted RBP14.85□□□□□ -0.03
SETD4-202ENST00000399201 LMNB1P20700 586 aa14.85□□□□□ -0.03
SETD4-202ENST00000399201 CHRNA5P30532 468 aa14.85□□□□□ -0.03
SETD4-202ENST00000399201 HTRA3P83110 453 aa14.85□□□□□ -0.03
SETD4-202ENST00000399201 DDR1Q08345 913 aa14.85□□□□□ -0.03
SETD4-202ENST00000399201 COL13A1Q5TAT6 717 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms