RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 ZBTB40Q9NUA8 1239 aa29.49■■■□□ 2.31
CDH23-206ENST00000398842 PTPRCP08575 1304 aa29.48■■■□□ 2.31
CDH23-206ENST00000398842 TOM1L2Q6ZVM7 507 aa29.48■■■□□ 2.31
CDH23-206ENST00000398842 SLC4A2P04920 1241 aa29.47■■■□□ 2.31
CDH23-206ENST00000398842 EIF4A1P60842 406 aaKnown RBP29.47■■■□□ 2.31
CDH23-206ENST00000398842 KDM6AO15550 1401 aaPredicted RBP29.47■■■□□ 2.31
CDH23-206ENST00000398842 BTBD11A6QL63 1104 aa29.47■■■□□ 2.31
CDH23-206ENST00000398842 IFNL2Q8IZJ0 200 aa29.46■■■□□ 2.31
CDH23-206ENST00000398842 CARD10Q9BWT7 1032 aa29.46■■■□□ 2.31
CDH23-206ENST00000398842 COL14A1Q05707 1796 aaKnown RBP29.45■■■□□ 2.31
CDH23-206ENST00000398842 CCDC30Q5VVM6 783 aa29.45■■■□□ 2.31
CDH23-206ENST00000398842 KCNQ3O43525 872 aa29.44■■■□□ 2.3
CDH23-206ENST00000398842 ZBTB7BO15156 539 aaPredicted RBP29.43■■■□□ 2.3
CDH23-206ENST00000398842 CYP27B1O15528 508 aa29.43■■■□□ 2.3
CDH23-206ENST00000398842 HOXB7P09629 217 aa29.42■■■□□ 2.3
CDH23-206ENST00000398842 STK31Q9BXU1 1019 aa29.42■■■□□ 2.3
CDH23-206ENST00000398842 LARP1Q6PKG0 1096 aaKnown RBP29.41■■■□□ 2.3
CDH23-206ENST00000398842 SKAP1Q86WV1 359 aa29.41■■■□□ 2.3
CDH23-206ENST00000398842 CHMP4BQ9H444 224 aaKnown RBP29.41■■■□□ 2.3
CDH23-206ENST00000398842 EVA1CP58658 441 aa29.41■■■□□ 2.3
CDH23-206ENST00000398842 INTS3Q68E01 1043 aaKnown RBP29.41■■■□□ 2.3
CDH23-206ENST00000398842 G2E3Q7L622 706 aa29.41■■■□□ 2.3
CDH23-206ENST00000398842 RWDD1Q9H446 243 aaPredicted RBP29.41■■■□□ 2.3
CDH23-206ENST00000398842 STRN4Q9NRL3 753 aa29.41■■■□□ 2.3
CDH23-206ENST00000398842 MRC1P22897 1456 aa29.4■■■□□ 2.3
CDH23-206ENST00000398842 HSPA1LP34931 641 aa29.39■■■□□ 2.3
CDH23-206ENST00000398842 HEG1Q9ULI3 1381 aa29.39■■■□□ 2.29
CDH23-206ENST00000398842 SLC52A2Q9HAB3 445 aa29.39■■■□□ 2.29
CDH23-206ENST00000398842 DCAF5Q96JK2 942 aa29.38■■■□□ 2.29
CDH23-206ENST00000398842 HSP90AB1P08238 724 aaKnown RBP29.37■■■□□ 2.29
CDH23-206ENST00000398842 HDAC1Q13547 482 aaPredicted RBP29.37■■■□□ 2.29
CDH23-206ENST00000398842 HDGFL1Q5TGJ6 251 aa29.37■■■□□ 2.29
CDH23-206ENST00000398842 RBM19Q9Y4C8 960 aaKnown RBP29.37■■■□□ 2.29
CDH23-206ENST00000398842 SHANK3Q9BYB0 1731 aa29.37■■■□□ 2.29
CDH23-206ENST00000398842 IL2RBP14784 551 aa29.36■■■□□ 2.29
CDH23-206ENST00000398842 BTG4Q9NY30 223 aa29.36■■■□□ 2.29
CDH23-206ENST00000398842 ZCRB1Q8TBF4 217 aaKnown RBP29.35■■■□□ 2.29
CDH23-206ENST00000398842 NECTIN2Q92692 538 aa29.35■■■□□ 2.29
CDH23-206ENST00000398842 NUTM2BA6NNL0 878 aaPredicted RBP29.34■■■□□ 2.29
CDH23-206ENST00000398842 NUTM2EB1AL46 878 aaPredicted RBP29.34■■■□□ 2.29
CDH23-206ENST00000398842 NUTM2AQ8IVF1 878 aaPredicted RBP29.34■■■□□ 2.29
CDH23-206ENST00000398842 CHMP4AQ9BY43 222 aa29.34■■■□□ 2.29
CDH23-206ENST00000398842 PCDH11XQ9BZA7 1347 aa29.34■■■□□ 2.29
CDH23-206ENST00000398842 PCDH11YQ9BZA8 1340 aa29.34■■■□□ 2.29
CDH23-206ENST00000398842 FLIIQ13045 1269 aa29.34■■■□□ 2.29
CDH23-206ENST00000398842 NFATC2IPQ8NCF5 419 aa29.31■■■□□ 2.28
CDH23-206ENST00000398842 JCADQ9P266 1359 aa29.31■■■□□ 2.28
CDH23-206ENST00000398842 GIGYF1O75420 1035 aaPredicted RBP29.31■■■□□ 2.28
CDH23-206ENST00000398842 ADAMTS2O95450 1211 aa29.3■■■□□ 2.28
CDH23-206ENST00000398842 N4BP2Q86UW6 1770 aaPredicted RBP29.3■■■□□ 2.28
CDH23-206ENST00000398842 EIF2S2P20042 333 aaKnown RBP29.29■■■□□ 2.28
CDH23-206ENST00000398842 ZNF790Q6PG37 636 aa29.29■■■□□ 2.28
CDH23-206ENST00000398842 PLCH1Q4KWH8 1693 aa29.29■■■□□ 2.28
CDH23-206ENST00000398842 NKX1-1Q15270 411 aaPredicted RBP29.28■■■□□ 2.28
CDH23-206ENST00000398842 F6X3S4 739 aa29.27■■■□□ 2.28
CDH23-206ENST00000398842 CCT4P50991 539 aaKnown RBP29.26■■■□□ 2.28
CDH23-206ENST00000398842 SLC39A6Q13433 755 aa29.26■■■□□ 2.28
CDH23-206ENST00000398842 FKBP5Q13451 457 aaPredicted RBP29.26■■■□□ 2.28
CDH23-206ENST00000398842 C1orf115Q9H7X2 142 aa29.26■■■□□ 2.27
CDH23-206ENST00000398842 CHPF2Q9P2E5 772 aa29.26■■■□□ 2.27
CDH23-206ENST00000398842 C5P01031 1676 aa29.25■■■□□ 2.27
CDH23-206ENST00000398842 SMC5Q8IY18 1101 aa29.25■■■□□ 2.27
CDH23-206ENST00000398842 PXDNLA1KZ92 1463 aa29.25■■■□□ 2.27
CDH23-206ENST00000398842 DISP2A7MBM2 1401 aa29.24■■■□□ 2.27
CDH23-206ENST00000398842 PHAXQ9H814 394 aaKnown RBP29.24■■■□□ 2.27
CDH23-206ENST00000398842 PDZRN3Q9UPQ7 1066 aa29.24■■■□□ 2.27
CDH23-206ENST00000398842 NRAPQ86VF7 1730 aa29.24■■■□□ 2.27
CDH23-206ENST00000398842 RGS3P49796 1198 aa29.24■■■□□ 2.27
CDH23-206ENST00000398842 CABP4P57796 275 aa29.23■■■□□ 2.27
CDH23-206ENST00000398842 USP35Q9P2H5 1018 aa29.23■■■□□ 2.27
CDH23-206ENST00000398842 WNK3Q9BYP7 1800 aa29.22■■■□□ 2.27
CDH23-206ENST00000398842 PRAMEF22A3QJZ6 481 aa29.22■■■□□ 2.27
CDH23-206ENST00000398842 SLC4A10Q6U841 1118 aa29.22■■■□□ 2.27
CDH23-206ENST00000398842 ERVV-2B6SEH9 535 aa29.21■■■□□ 2.27
CDH23-206ENST00000398842 DBF4Q9UBU7 674 aaPredicted RBP29.21■■■□□ 2.27
CDH23-206ENST00000398842 SIRT2Q8IXJ6 389 aa29.21■■■□□ 2.27
CDH23-206ENST00000398842 PDE4AP27815 886 aa29.19■■■□□ 2.26
CDH23-206ENST00000398842 DDX54Q8TDD1 881 aaKnown RBP29.19■■■□□ 2.26
CDH23-206ENST00000398842 MEIS3Q99687 375 aa29.19■■■□□ 2.26
CDH23-206ENST00000398842 GLI3P10071 1580 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 ZNF496Q96IT1 587 aaPredicted RBP29.18■■■□□ 2.26
CDH23-206ENST00000398842 TOGARAM1Q9Y4F4 1720 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 ATP10DQ9P241 1426 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 BACH2Q9BYV9 841 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 PAPPAQ13219 1627 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 TTC5Q8N0Z6 440 aa29.17■■■□□ 2.26
CDH23-206ENST00000398842 SPATA31A6Q5VVP1 1343 aa29.17■■■□□ 2.26
CDH23-206ENST00000398842 UBR2Q8IWV8 1755 aa29.17■■■□□ 2.26
CDH23-206ENST00000398842 NWD2Q9ULI1 1742 aa29.16■■■□□ 2.26
CDH23-206ENST00000398842 ANXA1P04083 346 aa29.16■■■□□ 2.26
CDH23-206ENST00000398842 PROSER3Q2NL68 480 aa29.14■■■□□ 2.26
CDH23-206ENST00000398842 FMNL2Q96PY5 1086 aa29.14■■■□□ 2.26
CDH23-206ENST00000398842 ANKRD44Q8N8A2 993 aa29.13■■■□□ 2.25
CDH23-206ENST00000398842 DDX21Q9NR30 783 aaKnown RBP eCLIP29.13■■■□□ 2.25
CDH23-206ENST00000398842 LRP6O75581 1613 aa29.13■■■□□ 2.25
CDH23-206ENST00000398842 LAMB4A4D0S4 1761 aa29.13■■■□□ 2.25
CDH23-206ENST00000398842 SNRPA1P09661 255 aaKnown RBP29.13■■■□□ 2.25
CDH23-206ENST00000398842 PDIA6Q15084 440 aa29.13■■■□□ 2.25
CDH23-206ENST00000398842 RPAP2Q8IXW5 612 aaPredicted RBP29.13■■■□□ 2.25
CDH23-206ENST00000398842 GCC1Q96CN9 775 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms