RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 CYP27B1O15528 508 aa19.52■□□□□ 0.72
FAM3B-204ENST00000398652 MMP10P09238 476 aa19.52■□□□□ 0.72
FAM3B-204ENST00000398652 C16orf71Q8IYS4 520 aaPredicted RBP19.52■□□□□ 0.72
FAM3B-204ENST00000398652 LINC00116Q8NCU8 138 aa19.52■□□□□ 0.72
FAM3B-204ENST00000398652 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
FAM3B-204ENST00000398652 ARHGAP27Q6ZUM4 889 aa19.51■□□□□ 0.71
FAM3B-204ENST00000398652 C4AP0C0L4 1744 aa19.51■□□□□ 0.71
FAM3B-204ENST00000398652 LOC102724428A0A0B4J2F2 783 aa19.5■□□□□ 0.71
FAM3B-204ENST00000398652 GNPATO15228 680 aa19.5■□□□□ 0.71
FAM3B-204ENST00000398652 SIK1P57059 783 aa19.5■□□□□ 0.71
FAM3B-204ENST00000398652 RRS1Q15050 365 aaKnown RBP19.5■□□□□ 0.71
FAM3B-204ENST00000398652 PIGBQ92521 554 aa19.5■□□□□ 0.71
FAM3B-204ENST00000398652 CARD11Q9BXL7 1154 aa19.5■□□□□ 0.71
FAM3B-204ENST00000398652 INSRP06213 1382 aa19.48■□□□□ 0.71
FAM3B-204ENST00000398652 A0A0G2JLW4 131 aa19.48■□□□□ 0.71
FAM3B-204ENST00000398652 SIN3AQ96ST3 1273 aa19.48■□□□□ 0.71
FAM3B-204ENST00000398652 SBF1O95248 1867 aa19.48■□□□□ 0.71
FAM3B-204ENST00000398652 KCPQ6ZWJ8 1503 aa19.47■□□□□ 0.71
FAM3B-204ENST00000398652 KIF20BQ96Q89 1820 aa19.47■□□□□ 0.71
FAM3B-204ENST00000398652 PCNTO95613 3336 aa19.46■□□□□ 0.71
FAM3B-204ENST00000398652 FCHSD2O94868 740 aa19.46■□□□□ 0.71
FAM3B-204ENST00000398652 C9orf131Q5VYM1 1079 aa19.46■□□□□ 0.71
FAM3B-204ENST00000398652 KDM2BQ8NHM5 1336 aa19.46■□□□□ 0.71
FAM3B-204ENST00000398652 DPEP1P16444 411 aa19.45■□□□□ 0.7
FAM3B-204ENST00000398652 ITPK1Q13572 414 aa19.45■□□□□ 0.7
FAM3B-204ENST00000398652 NKX1-1Q15270 411 aaPredicted RBP19.45■□□□□ 0.7
FAM3B-204ENST00000398652 ZNF831Q5JPB2 1677 aa19.45■□□□□ 0.7
FAM3B-204ENST00000398652 FLT4P35916 1363 aa19.44■□□□□ 0.7
FAM3B-204ENST00000398652 HSP90AB2PQ58FF8 381 aa19.44■□□□□ 0.7
FAM3B-204ENST00000398652 NLGN1Q8N2Q7 840 aa19.44■□□□□ 0.7
FAM3B-204ENST00000398652 CCDC87Q9NVE4 849 aa19.44■□□□□ 0.7
FAM3B-204ENST00000398652 COL5A3P25940 1745 aaPredicted RBP19.44■□□□□ 0.7
FAM3B-204ENST00000398652 KIF24Q5T7B8 1368 aa19.44■□□□□ 0.7
FAM3B-204ENST00000398652 ATXN8OSP0DMR3 200 aa19.43■□□□□ 0.7
FAM3B-204ENST00000398652 ATP6V1AP38606 617 aa19.43■□□□□ 0.7
FAM3B-204ENST00000398652 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
FAM3B-204ENST00000398652 TMF1P82094 1093 aa19.42■□□□□ 0.7
FAM3B-204ENST00000398652 TMOD3Q9NYL9 352 aa19.42■□□□□ 0.7
FAM3B-204ENST00000398652 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
FAM3B-204ENST00000398652 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
FAM3B-204ENST00000398652 SMC1BQ8NDV3 1235 aa19.41■□□□□ 0.7
FAM3B-204ENST00000398652 ASAP1Q9ULH1 1129 aa19.41■□□□□ 0.7
FAM3B-204ENST00000398652 U3KPZ7 1027 aaPredicted RBP19.41■□□□□ 0.7
FAM3B-204ENST00000398652 FYB1O15117 783 aa19.4■□□□□ 0.7
FAM3B-204ENST00000398652 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
FAM3B-204ENST00000398652 RTCBQ9Y3I0 505 aaKnown RBP19.4■□□□□ 0.7
FAM3B-204ENST00000398652 RRAGCQ9HB90 399 aa19.39■□□□□ 0.69
FAM3B-204ENST00000398652 RNF181Q9P0P0 153 aa19.39■□□□□ 0.69
FAM3B-204ENST00000398652 SPG7Q9UQ90 795 aa19.39■□□□□ 0.69
FAM3B-204ENST00000398652 KDRP35968 1356 aa19.39■□□□□ 0.69
FAM3B-204ENST00000398652 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.69
FAM3B-204ENST00000398652 HSPA1AP0DMV8 641 aaKnown RBP19.38■□□□□ 0.69
FAM3B-204ENST00000398652 HSPA1BP0DMV9 641 aaKnown RBP19.38■□□□□ 0.69
FAM3B-204ENST00000398652 KCNA3P22001 575 aa19.38■□□□□ 0.69
FAM3B-204ENST00000398652 DCAF5Q96JK2 942 aa19.38■□□□□ 0.69
FAM3B-204ENST00000398652 PARP3Q9Y6F1 533 aa19.38■□□□□ 0.69
FAM3B-204ENST00000398652 MYH14Q7Z406 1995 aaKnown RBP19.37■□□□□ 0.69
FAM3B-204ENST00000398652 GYS1P13807 737 aa19.37■□□□□ 0.69
FAM3B-204ENST00000398652 TESK2Q96S53 571 aa19.37■□□□□ 0.69
FAM3B-204ENST00000398652 PIM2Q9P1W9 311 aa19.37■□□□□ 0.69
FAM3B-204ENST00000398652 ATG3Q9NT62 314 aa19.36■□□□□ 0.69
FAM3B-204ENST00000398652 DALRD3Q5D0E6 543 aaKnown RBP19.35■□□□□ 0.69
FAM3B-204ENST00000398652 ARHGEF1Q92888 912 aaKnown RBP19.35■□□□□ 0.69
FAM3B-204ENST00000398652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.35■□□□□ 0.697e-6■■□□□ 12.8
FAM3B-204ENST00000398652 CCDC88AQ3V6T2 1871 aa19.33■□□□□ 0.69
FAM3B-204ENST00000398652 CNTNAP4Q9C0A0 1308 aa19.33■□□□□ 0.69
FAM3B-204ENST00000398652 ZC3H4Q9UPT8 1303 aaKnown RBP19.33■□□□□ 0.69
FAM3B-204ENST00000398652 RFC4P35249 363 aa19.33■□□□□ 0.68
FAM3B-204ENST00000398652 RC3H1Q5TC82 1133 aaKnown RBP19.33■□□□□ 0.68
FAM3B-204ENST00000398652 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
FAM3B-204ENST00000398652 TIAM2Q8IVF5 1701 aa19.32■□□□□ 0.68
FAM3B-204ENST00000398652 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
FAM3B-204ENST00000398652 PHKG2P15735 406 aa19.32■□□□□ 0.68
FAM3B-204ENST00000398652 IFNL2Q8IZJ0 200 aa19.32■□□□□ 0.68
FAM3B-204ENST00000398652 RPS6KA4O75676 772 aa19.31■□□□□ 0.68
FAM3B-204ENST00000398652 SLC4A9Q96Q91 983 aa19.31■□□□□ 0.68
FAM3B-204ENST00000398652 ST20-MTHFSA0A0A6YYL1 179 aa19.3■□□□□ 0.68
FAM3B-204ENST00000398652 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
FAM3B-204ENST00000398652 KDM6AO15550 1401 aaPredicted RBP19.3■□□□□ 0.68
FAM3B-204ENST00000398652 DLEC1Q9Y238 1755 aa19.29■□□□□ 0.68
FAM3B-204ENST00000398652 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
FAM3B-204ENST00000398652 VEGFAP15692 232 aaPredicted RBP19.27■□□□□ 0.68
FAM3B-204ENST00000398652 SLC34A2O95436 690 aa19.26■□□□□ 0.67
FAM3B-204ENST00000398652 CHRNA5P30532 468 aa19.26■□□□□ 0.67
FAM3B-204ENST00000398652 DDR1Q08345 913 aa19.26■□□□□ 0.67
FAM3B-204ENST00000398652 EYA1Q99502 592 aa19.26■□□□□ 0.67
FAM3B-204ENST00000398652 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
FAM3B-204ENST00000398652 ADAMTS7Q9UKP4 1686 aa19.25■□□□□ 0.67
FAM3B-204ENST00000398652 GLTPD2A6NH11 291 aa19.25■□□□□ 0.67
FAM3B-204ENST00000398652 TJP1Q07157 1748 aa19.25■□□□□ 0.67
FAM3B-204ENST00000398652 WASHC2AQ641Q2 1341 aa19.25■□□□□ 0.67
FAM3B-204ENST00000398652 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
FAM3B-204ENST00000398652 ERVV-2B6SEH9 535 aa19.24■□□□□ 0.67
FAM3B-204ENST00000398652 PPM1GO15355 546 aaPredicted RBP19.24■□□□□ 0.67
FAM3B-204ENST00000398652 RASSF7Q02833 373 aa19.24■□□□□ 0.67
FAM3B-204ENST00000398652 FKBP8Q14318 412 aa19.24■□□□□ 0.67
FAM3B-204ENST00000398652 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
FAM3B-204ENST00000398652 SRP68Q9UHB9 627 aaKnown RBP19.23■□□□□ 0.67
FAM3B-204ENST00000398652 DICER1Q9UPY3 1922 aaKnown RBP19.22■□□□□ 0.67
FAM3B-204ENST00000398652 LMNB1P20700 586 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms