RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 ESYT1Q9BSJ8 1104 aa16.74■□□□□ 0.27
COL6A2-203ENST00000397763 CPA1P15085 419 aa16.73■□□□□ 0.27
COL6A2-203ENST00000397763 DNTTIP2Q5QJE6 756 aaKnown RBP16.73■□□□□ 0.27
COL6A2-203ENST00000397763 C17orf53Q8N3J3 647 aaPredicted RBP16.73■□□□□ 0.27
COL6A2-203ENST00000397763 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
COL6A2-203ENST00000397763 ARHGAP31Q2M1Z3 1444 aa16.73■□□□□ 0.27
COL6A2-203ENST00000397763 ACEP12821 1306 aa16.73■□□□□ 0.27
COL6A2-203ENST00000397763 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
COL6A2-203ENST00000397763 MX1P20591 662 aa16.73■□□□□ 0.27
COL6A2-203ENST00000397763 LRSAM1Q6UWE0 723 aa16.73■□□□□ 0.27
COL6A2-203ENST00000397763 TSC1Q92574 1164 aa16.73■□□□□ 0.27
COL6A2-203ENST00000397763 CPSF1Q10570 1443 aaKnown RBP16.72■□□□□ 0.27
COL6A2-203ENST00000397763 GNAI2P04899 355 aa16.72■□□□□ 0.27
COL6A2-203ENST00000397763 LRRCC1Q9C099 1032 aa16.72■□□□□ 0.27
COL6A2-203ENST00000397763 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
COL6A2-203ENST00000397763 CDC42BPGQ6DT37 1551 aa16.71■□□□□ 0.27
COL6A2-203ENST00000397763 NOL7Q9UMY1 257 aaKnown RBP16.71■□□□□ 0.27
COL6A2-203ENST00000397763 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
COL6A2-203ENST00000397763 FAM177BA6PVY3 158 aa16.71■□□□□ 0.27
COL6A2-203ENST00000397763 ATP7BP35670 1465 aa16.71■□□□□ 0.26
COL6A2-203ENST00000397763 CHMLP26374 656 aa16.7■□□□□ 0.26
COL6A2-203ENST00000397763 STK31Q9BXU1 1019 aa16.7■□□□□ 0.26
COL6A2-203ENST00000397763 PREX1Q8TCU6 1659 aa16.7■□□□□ 0.26
COL6A2-203ENST00000397763 SLC26A8Q96RN1 970 aa16.7■□□□□ 0.26
COL6A2-203ENST00000397763 FAM69CQ0P6D2 419 aa16.7■□□□□ 0.26
COL6A2-203ENST00000397763 PTPRCP08575 1304 aa16.69■□□□□ 0.26
COL6A2-203ENST00000397763 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
COL6A2-203ENST00000397763 FLIIQ13045 1269 aa16.69■□□□□ 0.26
COL6A2-203ENST00000397763 PDLIM2Q96JY6 352 aa16.69■□□□□ 0.26
COL6A2-203ENST00000397763 USP48Q86UV5 1035 aa16.69■□□□□ 0.26
COL6A2-203ENST00000397763 BRD1O95696 1058 aa16.68■□□□□ 0.26
COL6A2-203ENST00000397763 ANXA1P04083 346 aa16.68■□□□□ 0.26
COL6A2-203ENST00000397763 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
COL6A2-203ENST00000397763 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
COL6A2-203ENST00000397763 ZKSCAN5Q9Y2L8 839 aa16.68■□□□□ 0.26
COL6A2-203ENST00000397763 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
COL6A2-203ENST00000397763 PHAXQ9H814 394 aaKnown RBP16.68■□□□□ 0.26
COL6A2-203ENST00000397763 ZHX1Q9UKY1 873 aaPredicted RBP16.68■□□□□ 0.26
COL6A2-203ENST00000397763 CNPY2Q9Y2B0 182 aa16.68■□□□□ 0.26
COL6A2-203ENST00000397763 AATKQ6ZMQ8 1374 aa16.67■□□□□ 0.26
COL6A2-203ENST00000397763 AMPHP49418 695 aa16.67■□□□□ 0.26
COL6A2-203ENST00000397763 USP25Q9UHP3 1055 aa16.67■□□□□ 0.26
COL6A2-203ENST00000397763 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
COL6A2-203ENST00000397763 CHMP3Q9Y3E7 222 aa16.67■□□□□ 0.26
COL6A2-203ENST00000397763 TSPY26PQ9H489 355 aa16.67■□□□□ 0.26
COL6A2-203ENST00000397763 SURF6O75683 361 aaKnown RBP16.66■□□□□ 0.26
COL6A2-203ENST00000397763 MCCP23508 829 aa16.66■□□□□ 0.26
COL6A2-203ENST00000397763 CCT4P50991 539 aaKnown RBP16.66■□□□□ 0.26
COL6A2-203ENST00000397763 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
COL6A2-203ENST00000397763 EYA1Q99502 592 aa16.66■□□□□ 0.26
COL6A2-203ENST00000397763 FIBPO43427 364 aa16.65■□□□□ 0.26
COL6A2-203ENST00000397763 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
COL6A2-203ENST00000397763 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
COL6A2-203ENST00000397763 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL6A2-203ENST00000397763 KIF24Q5T7B8 1368 aa16.65■□□□□ 0.26
COL6A2-203ENST00000397763 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
COL6A2-203ENST00000397763 CWC27Q6UX04 472 aaKnown RBP16.64■□□□□ 0.25
COL6A2-203ENST00000397763 C14orf37Q86TY3 774 aa16.64■□□□□ 0.25
COL6A2-203ENST00000397763 CRB1P82279 1406 aa16.64■□□□□ 0.25
COL6A2-203ENST00000397763 A0A0U1RQG5 324 aaPredicted RBP16.64■□□□□ 0.25
COL6A2-203ENST00000397763 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
COL6A2-203ENST00000397763 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
COL6A2-203ENST00000397763 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.25
COL6A2-203ENST00000397763 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
COL6A2-203ENST00000397763 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
COL6A2-203ENST00000397763 NEO1Q92859 1461 aa16.63■□□□□ 0.25
COL6A2-203ENST00000397763 RIMS1Q86UR5 1692 aaKnown RBP16.63■□□□□ 0.25
COL6A2-203ENST00000397763 MBD3O95983 291 aa16.63■□□□□ 0.25
COL6A2-203ENST00000397763 ATP8B2P98198 1209 aa16.63■□□□□ 0.25
COL6A2-203ENST00000397763 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
COL6A2-203ENST00000397763 ZNF500O60304 480 aaPredicted RBP16.62■□□□□ 0.25
COL6A2-203ENST00000397763 NGDNQ8NEJ9 315 aaKnown RBP16.62■□□□□ 0.25
COL6A2-203ENST00000397763 KIAA0232Q92628 1395 aa16.62■□□□□ 0.25
COL6A2-203ENST00000397763 UBTFL1P0CB47 393 aaPredicted RBP16.62■□□□□ 0.25
COL6A2-203ENST00000397763 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
COL6A2-203ENST00000397763 CCDC39Q9UFE4 941 aa16.62■□□□□ 0.25
COL6A2-203ENST00000397763 CUL4AQ13619 759 aa16.61■□□□□ 0.25
COL6A2-203ENST00000397763 SALL3Q9BXA9 1300 aa16.61■□□□□ 0.25
COL6A2-203ENST00000397763 LARGE1O95461 756 aa16.61■□□□□ 0.25
COL6A2-203ENST00000397763 NBPF7P0C2Y1 421 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-203ENST00000397763 GIMAP6Q6P9H5 292 aa16.61■□□□□ 0.25
COL6A2-203ENST00000397763 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-203ENST00000397763 SRGAP3O43295 1099 aa16.6■□□□□ 0.25
COL6A2-203ENST00000397763 GNAI3P08754 354 aa16.6■□□□□ 0.25
COL6A2-203ENST00000397763 TCHHQ07283 1943 aa16.6■□□□□ 0.25
COL6A2-203ENST00000397763 AK2P54819 239 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-203ENST00000397763 PRDM4Q9UKN5 801 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 NLRP6P59044 892 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-203ENST00000397763 HDGFL1Q5TGJ6 251 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 FAM173BQ6P4H8 233 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 CCDC83Q8IWF9 413 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 TCEANC2Q96MN5 208 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
COL6A2-203ENST00000397763 DLC1Q96QB1 1528 aa16.58■□□□□ 0.24
COL6A2-203ENST00000397763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.58■□□□□ 0.24
COL6A2-203ENST00000397763 CSPP1Q1MSJ5 1256 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms