RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 PLVAPQ9BX97 442 aa4.98□□□□□ -1.61
XRCC4-203ENST00000396027 CARD14Q9BXL6 1004 aa4.98□□□□□ -1.61
XRCC4-203ENST00000396027 NDUFV2P19404 249 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 MAP2K5Q13163 448 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 INTS6LQ5JSJ4 861 aaKnown RBP4.97□□□□□ -1.61
XRCC4-203ENST00000396027 RNF135Q8IUD6 432 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 SPIRE2Q8WWL2 714 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 JAG1P78504 1218 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 FGD1P98174 961 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 CHSY3Q70JA7 882 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 TRIM11Q96F44 468 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 USP35Q9P2H5 1018 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 RNF112Q9ULX5 631 aa4.97□□□□□ -1.61
XRCC4-203ENST00000396027 MOXD2PA6NHM9 499 aa4.96□□□□□ -1.62
XRCC4-203ENST00000396027 ARAFP10398 606 aa4.96□□□□□ -1.62
XRCC4-203ENST00000396027 BRD2P25440 801 aaKnown RBP4.96□□□□□ -1.62
XRCC4-203ENST00000396027 LBRQ14739 615 aaKnown RBP4.96□□□□□ -1.62
XRCC4-203ENST00000396027 KDF1Q8NAX2 398 aaPredicted RBP4.96□□□□□ -1.62
XRCC4-203ENST00000396027 BCCIPQ9P287 314 aaKnown RBP eCLIP4.96□□□□□ -1.62
XRCC4-203ENST00000396027 ATXN7L1Q9ULK2 861 aaPredicted RBP4.96□□□□□ -1.62
XRCC4-203ENST00000396027 CFAP99D6REC4 459 aa4.95□□□□□ -1.62
XRCC4-203ENST00000396027 ZNF784Q8NCA9 323 aaPredicted RBP4.94□□□□□ -1.62
XRCC4-203ENST00000396027 HSP90B1P14625 803 aaKnown RBP4.93□□□□□ -1.62
XRCC4-203ENST00000396027 TAL1P17542 331 aaPredicted RBP4.93□□□□□ -1.62
XRCC4-203ENST00000396027 DEKP35659 375 aaKnown RBP4.93□□□□□ -1.62
XRCC4-203ENST00000396027 POU4F2Q12837 409 aa4.93□□□□□ -1.62
XRCC4-203ENST00000396027 NBPF10Q6P3W6 841 aaKnown RBP4.93□□□□□ -1.62
XRCC4-203ENST00000396027 NBPF15Q8N660 670 aa4.93□□□□□ -1.62
XRCC4-203ENST00000396027 TIMMDC1Q9NPL8 285 aa4.93□□□□□ -1.62
XRCC4-203ENST00000396027 MINK1Q8N4C8 1332 aaPredicted RBP4.93□□□□□ -1.62
XRCC4-203ENST00000396027 SHROOM4Q9ULL8 1493 aa4.93□□□□□ -1.62
XRCC4-203ENST00000396027 IRF6O14896 467 aa4.92□□□□□ -1.62
XRCC4-203ENST00000396027 LILRA1O75019 489 aa4.92□□□□□ -1.62
XRCC4-203ENST00000396027 NPM2Q86SE8 214 aaKnown RBP4.92□□□□□ -1.62
XRCC4-203ENST00000396027 ZBTB3Q9H5J0 574 aa4.92□□□□□ -1.62
XRCC4-203ENST00000396027 PCMTD2Q9NV79 361 aa4.92□□□□□ -1.62
XRCC4-203ENST00000396027 SUPT16HQ9Y5B9 1047 aaKnown RBP4.92□□□□□ -1.62
XRCC4-203ENST00000396027 SPATA31C2B4DYI2 1134 aa4.92□□□□□ -1.62
XRCC4-203ENST00000396027 ADD1P35611 737 aaKnown RBP4.92□□□□□ -1.62
XRCC4-203ENST00000396027 RTL5Q5HYW3 569 aaPredicted RBP4.92□□□□□ -1.62
XRCC4-203ENST00000396027 ARHGAP9Q9BRR9 750 aa4.92□□□□□ -1.62
XRCC4-203ENST00000396027 TMPRSS4Q9NRS4 437 aa4.92□□□□□ -1.62
XRCC4-203ENST00000396027 TIMELESSQ9UNS1 1208 aa4.92□□□□□ -1.62
XRCC4-203ENST00000396027 C2CD2LO14523 706 aa4.91□□□□□ -1.62
XRCC4-203ENST00000396027 RRP9O43818 475 aaKnown RBP4.91□□□□□ -1.62
XRCC4-203ENST00000396027 FGFR3P22607 806 aa4.91□□□□□ -1.62
XRCC4-203ENST00000396027 NBPF20Q3BBV1 942 aa4.91□□□□□ -1.62
XRCC4-203ENST00000396027 SLC27A3Q5K4L6 730 aa4.91□□□□□ -1.62
XRCC4-203ENST00000396027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.91□□□□□ -1.62
XRCC4-203ENST00000396027 KRI1Q8N9T8 703 aaKnown RBP4.91□□□□□ -1.62
XRCC4-203ENST00000396027 NEURL1BA8MQ27 555 aa4.9□□□□□ -1.63
XRCC4-203ENST00000396027 PER1O15534 1290 aaPredicted RBP4.9□□□□□ -1.63
XRCC4-203ENST00000396027 ANP32AP39687 249 aaKnown RBP4.9□□□□□ -1.63
XRCC4-203ENST00000396027 PDXDC2PQ6P474 469 aa4.9□□□□□ -1.63
XRCC4-203ENST00000396027 ANP32BQ92688 251 aaKnown RBP4.9□□□□□ -1.63
XRCC4-203ENST00000396027 BCANQ96GW7 911 aa4.9□□□□□ -1.63
XRCC4-203ENST00000396027 MEN1O00255 615 aa4.89□□□□□ -1.63
XRCC4-203ENST00000396027 THBS1P07996 1170 aa4.89□□□□□ -1.63
XRCC4-203ENST00000396027 CDK11BP21127 795 aaKnown RBP4.89□□□□□ -1.63
XRCC4-203ENST00000396027 ADH6P28332 368 aa4.89□□□□□ -1.63
XRCC4-203ENST00000396027 TAS1R3Q7RTX0 852 aa4.89□□□□□ -1.63
XRCC4-203ENST00000396027 ZBTB33Q86T24 672 aa4.89□□□□□ -1.63
XRCC4-203ENST00000396027 CCDC102AQ96A19 550 aa4.89□□□□□ -1.63
XRCC4-203ENST00000396027 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
XRCC4-203ENST00000396027 AVENQ9NQS1 362 aaPredicted RBP4.89□□□□□ -1.63
XRCC4-203ENST00000396027 RBM19Q9Y4C8 960 aaKnown RBP4.89□□□□□ -1.63
XRCC4-203ENST00000396027 C9orf172C9J069 976 aa4.88□□□□□ -1.63
XRCC4-203ENST00000396027 ATP5J2-PTCD1G3V325 749 aa4.88□□□□□ -1.63
XRCC4-203ENST00000396027 DIXDC1Q155Q3 683 aa4.88□□□□□ -1.63
XRCC4-203ENST00000396027 GRIP2Q9C0E4 1043 aa4.88□□□□□ -1.63
XRCC4-203ENST00000396027 ARID4BQ4LE39 1312 aaPredicted RBP4.88□□□□□ -1.63
XRCC4-203ENST00000396027 WASLO00401 505 aaPredicted RBP4.87□□□□□ -1.63
XRCC4-203ENST00000396027 UBAP2LQ14157 1087 aaKnown RBP4.87□□□□□ -1.63
XRCC4-203ENST00000396027 NLRP3Q96P20 1036 aa4.87□□□□□ -1.63
XRCC4-203ENST00000396027 ZMYND15Q9H091 742 aa4.87□□□□□ -1.63
XRCC4-203ENST00000396027 ERVH48-1M5A8F1 160 aa4.87□□□□□ -1.63
XRCC4-203ENST00000396027 CSB-PGBD3P0DP91 1061 aa4.87□□□□□ -1.63
XRCC4-203ENST00000396027 CTBSQ01459 385 aa4.87□□□□□ -1.63
XRCC4-203ENST00000396027 TRIM28Q13263 835 aaKnown RBP4.87□□□□□ -1.63
XRCC4-203ENST00000396027 AAMPQ13685 434 aa4.87□□□□□ -1.63
XRCC4-203ENST00000396027 RSBN1LQ6PCB5 846 aaPredicted RBP4.87□□□□□ -1.63
XRCC4-203ENST00000396027 PGBD3Q8N328 593 aa4.87□□□□□ -1.63
XRCC4-203ENST00000396027 NAP1L5Q96NT1 182 aaPredicted RBP4.87□□□□□ -1.63
XRCC4-203ENST00000396027 A0A1B0GTH6 734 aa4.86□□□□□ -1.63
XRCC4-203ENST00000396027 PTMSP20962 102 aa4.86□□□□□ -1.63
XRCC4-203ENST00000396027 SSTR3P32745 418 aaPredicted RBP4.86□□□□□ -1.63
XRCC4-203ENST00000396027 EFHC2Q5JST6 749 aa4.86□□□□□ -1.63
XRCC4-203ENST00000396027 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
XRCC4-203ENST00000396027 BARGINQ6ZT62 677 aa4.86□□□□□ -1.63
XRCC4-203ENST00000396027 ABHD17AQ96GS6 310 aa4.86□□□□□ -1.63
XRCC4-203ENST00000396027 CENPJQ9HC77 1338 aaPredicted RBP4.85□□□□□ -1.63
XRCC4-203ENST00000396027 A0A1W2PRU2 124 aa4.85□□□□□ -1.63
XRCC4-203ENST00000396027 ZMYND10O75800 440 aa4.85□□□□□ -1.63
XRCC4-203ENST00000396027 ADGRE1Q14246 886 aa4.85□□□□□ -1.63
XRCC4-203ENST00000396027 TXNRD3Q86VQ6 643 aa4.85□□□□□ -1.63
XRCC4-203ENST00000396027 GPAMQ9HCL2 828 aa4.85□□□□□ -1.63
XRCC4-203ENST00000396027 NDFIP2Q9NV92 336 aa4.85□□□□□ -1.63
XRCC4-203ENST00000396027 SLC51AQ86UW1 340 aa4.84□□□□□ -1.63
XRCC4-203ENST00000396027 TP53INP1Q96A56 240 aa4.84□□□□□ -1.63
XRCC4-203ENST00000396027 MYO15BQ96JP2 1530 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms