RNA–Protein interactions for RNA: ENST00000395873.7

ZNF248-204, Transcript of zinc finger protein 248, humanhuman

TSL 3

Gene ZNF248, Length 698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-204ENST00000395873 FHDC1Q9C0D6 1143 aaPredicted RBP29.71■■■□□ 2.35
ZNF248-204ENST00000395873 ATG3Q9NT62 314 aa29.7■■■□□ 2.35
ZNF248-204ENST00000395873 ATP6V1AP38606 617 aa29.69■■■□□ 2.34
ZNF248-204ENST00000395873 CNGB1Q14028 1251 aaPredicted RBP29.69■■■□□ 2.34
ZNF248-204ENST00000395873 AKAP4Q5JQC9 854 aa29.69■■■□□ 2.34
ZNF248-204ENST00000395873 COL23A1Q86Y22 540 aaPredicted RBP29.69■■■□□ 2.34
ZNF248-204ENST00000395873 CFAP53Q96M91 514 aa29.69■■■□□ 2.34
ZNF248-204ENST00000395873 SYT17Q9BSW7 474 aa29.69■■■□□ 2.34
ZNF248-204ENST00000395873 COL3A1P02461 1466 aaPredicted RBP29.68■■■□□ 2.34
ZNF248-204ENST00000395873 HMOX1P09601 288 aa29.67■■■□□ 2.34
ZNF248-204ENST00000395873 COL5A3P25940 1745 aaPredicted RBP29.67■■■□□ 2.34
ZNF248-204ENST00000395873 SSFA2P28290 1259 aa29.65■■■□□ 2.34
ZNF248-204ENST00000395873 LINC00116Q8NCU8 138 aa29.63■■■□□ 2.33
ZNF248-204ENST00000395873 U2SURPO15042 1029 aaKnown RBP29.62■■■□□ 2.33
ZNF248-204ENST00000395873 RBM42Q9BTD8 480 aaKnown RBP29.62■■■□□ 2.33
ZNF248-204ENST00000395873 CICQ96RK0 1608 aaPredicted RBP29.62■■■□□ 2.33
ZNF248-204ENST00000395873 ADAMTS7Q9UKP4 1686 aa29.61■■■□□ 2.33
ZNF248-204ENST00000395873 ITPK1Q13572 414 aa29.6■■■□□ 2.33
ZNF248-204ENST00000395873 NFATC2IPQ8NCF5 419 aa29.6■■■□□ 2.33
ZNF248-204ENST00000395873 CHD4Q14839 1912 aa29.59■■■□□ 2.33
ZNF248-204ENST00000395873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.59■■■□□ 2.33
ZNF248-204ENST00000395873 GNPATO15228 680 aa29.59■■■□□ 2.33
ZNF248-204ENST00000395873 NUDCQ9Y266 331 aa29.59■■■□□ 2.33
ZNF248-204ENST00000395873 MRC1P22897 1456 aa29.59■■■□□ 2.33
ZNF248-204ENST00000395873 PHF14O94880 888 aa29.58■■■□□ 2.33
ZNF248-204ENST00000395873 KLHL34Q8N239 644 aa29.58■■■□□ 2.33
ZNF248-204ENST00000395873 MTHFSDQ2M296 383 aaKnown RBP29.56■■■□□ 2.32
ZNF248-204ENST00000395873 RC3H1Q5TC82 1133 aaKnown RBP29.56■■■□□ 2.32
ZNF248-204ENST00000395873 SLC52A2Q9HAB3 445 aa29.56■■■□□ 2.32
ZNF248-204ENST00000395873 CNTNAP4Q9C0A0 1308 aa29.55■■■□□ 2.32
ZNF248-204ENST00000395873 MSL1Q68DK7 614 aa29.55■■■□□ 2.32
ZNF248-204ENST00000395873 GAS2L2Q8NHY3 880 aa29.55■■■□□ 2.32
ZNF248-204ENST00000395873 RTCBQ9Y3I0 505 aaKnown RBP29.55■■■□□ 2.32
ZNF248-204ENST00000395873 PPP2R1AP30153 589 aa29.54■■■□□ 2.32
ZNF248-204ENST00000395873 TJP1Q07157 1748 aa29.54■■■□□ 2.32
ZNF248-204ENST00000395873 RNMTO43148 476 aaKnown RBP29.53■■■□□ 2.32
ZNF248-204ENST00000395873 ADRA2BP18089 450 aa29.53■■■□□ 2.32
ZNF248-204ENST00000395873 MYH14Q7Z406 1995 aaKnown RBP29.52■■■□□ 2.32
ZNF248-204ENST00000395873 PTCD1O75127 700 aaKnown RBP29.51■■■□□ 2.31
ZNF248-204ENST00000395873 YY1P25490 414 aa29.51■■■□□ 2.31
ZNF248-204ENST00000395873 TRAPPC3LQ5T215 181 aa29.51■■■□□ 2.31
ZNF248-204ENST00000395873 SLC4A9Q96Q91 983 aa29.51■■■□□ 2.31
ZNF248-204ENST00000395873 C4AP0C0L4 1744 aa29.49■■■□□ 2.31
ZNF248-204ENST00000395873 AMIGO3Q86WK7 504 aa29.49■■■□□ 2.31
ZNF248-204ENST00000395873 LGR6Q9HBX8 967 aa29.49■■■□□ 2.31
ZNF248-204ENST00000395873 UBR2Q8IWV8 1755 aa29.49■■■□□ 2.31
ZNF248-204ENST00000395873 SIPA1L3O60292 1781 aaPredicted RBP29.48■■■□□ 2.31
ZNF248-204ENST00000395873 GNAT3A8MTJ3 354 aa29.47■■■□□ 2.31
ZNF248-204ENST00000395873 CD2APQ9Y5K6 639 aa29.47■■■□□ 2.31
ZNF248-204ENST00000395873 RPS6KA4O75676 772 aa29.46■■■□□ 2.31
ZNF248-204ENST00000395873 GPR162Q16538 588 aa29.46■■■□□ 2.31
ZNF248-204ENST00000395873 U2AF1L5P0DN76 240 aaPredicted RBP29.44■■■□□ 2.3
ZNF248-204ENST00000395873 PRKAR2BP31323 418 aa29.44■■■□□ 2.3
ZNF248-204ENST00000395873 U2AF1Q01081 240 aaKnown RBP eCLIP29.44■■■□□ 2.3
ZNF248-204ENST00000395873 RSPH6AQ9H0K4 717 aa29.44■■■□□ 2.3
ZNF248-204ENST00000395873 RFC4P35249 363 aa29.43■■■□□ 2.3
ZNF248-204ENST00000395873 TEFQ10587 303 aa29.43■■■□□ 2.3
ZNF248-204ENST00000395873 FCHSD2O94868 740 aa29.42■■■□□ 2.3
ZNF248-204ENST00000395873 CRKLP46109 303 aaKnown RBP29.42■■■□□ 2.3
ZNF248-204ENST00000395873 TTC5Q8N0Z6 440 aa29.42■■■□□ 2.3
ZNF248-204ENST00000395873 NLGN1Q8N2Q7 840 aa29.42■■■□□ 2.3
ZNF248-204ENST00000395873 KCPQ6ZWJ8 1503 aa29.41■■■□□ 2.3
ZNF248-204ENST00000395873 SMIM5Q71RC9 77 aa29.41■■■□□ 2.3
ZNF248-204ENST00000395873 VSIG10Q8N0Z9 540 aa29.41■■■□□ 2.3
ZNF248-204ENST00000395873 NLGN2Q8NFZ4 835 aa29.4■■■□□ 2.3
ZNF248-204ENST00000395873 ARHGEF1Q92888 912 aaKnown RBP29.4■■■□□ 2.3
ZNF248-204ENST00000395873 NEFMP07197 916 aa29.39■■■□□ 2.3
ZNF248-204ENST00000395873 PELP1Q8IZL8 1130 aaKnown RBP29.39■■■□□ 2.3
ZNF248-204ENST00000395873 KIF13BQ9NQT8 1826 aa29.38■■■□□ 2.29
ZNF248-204ENST00000395873 SLC39A6Q13433 755 aa29.38■■■□□ 2.29
ZNF248-204ENST00000395873 GRIN3BO60391 1043 aa29.35■■■□□ 2.29
ZNF248-204ENST00000395873 MMP10P09238 476 aa29.35■■■□□ 2.29
ZNF248-204ENST00000395873 DNAJC10Q8IXB1 793 aa29.35■■■□□ 2.29
ZNF248-204ENST00000395873 IL17REQ8NFR9 667 aa29.35■■■□□ 2.29
ZNF248-204ENST00000395873 RTF1Q92541 710 aaKnown RBP29.35■■■□□ 2.29
ZNF248-204ENST00000395873 PHACTR3Q96KR7 559 aa29.35■■■□□ 2.29
ZNF248-204ENST00000395873 CCDC87Q9NVE4 849 aa29.35■■■□□ 2.29
ZNF248-204ENST00000395873 CEMIPQ8WUJ3 1361 aa29.35■■■□□ 2.29
ZNF248-204ENST00000395873 RALBP1Q15311 655 aa29.34■■■□□ 2.29
ZNF248-204ENST00000395873 DLG5Q8TDM6 1919 aa29.33■■■□□ 2.29
ZNF248-204ENST00000395873 GYS1P13807 737 aa29.32■■■□□ 2.28
ZNF248-204ENST00000395873 TEX13AQ9BXU3 409 aaPredicted RBP29.32■■■□□ 2.28
ZNF248-204ENST00000395873 PNNQ9H307 717 aaKnown RBP29.32■■■□□ 2.28
ZNF248-204ENST00000395873 STARD3NLO95772 234 aa29.31■■■□□ 2.28
ZNF248-204ENST00000395873 CYP19A1P11511 503 aaPredicted RBP29.31■■■□□ 2.28
ZNF248-204ENST00000395873 INTS5Q6P9B9 1019 aaKnown RBP29.31■■■□□ 2.28
ZNF248-204ENST00000395873 ZNF790Q6PG37 636 aa29.31■■■□□ 2.28
ZNF248-204ENST00000395873 USP42Q9H9J4 1324 aaKnown RBP29.3■■■□□ 2.28
ZNF248-204ENST00000395873 HTATSF1O43719 755 aaKnown RBP29.3■■■□□ 2.28
ZNF248-204ENST00000395873 PARP3Q9Y6F1 533 aa29.3■■■□□ 2.28
ZNF248-204ENST00000395873 ZPR1O75312 459 aa29.29■■■□□ 2.28
ZNF248-204ENST00000395873 SOS1Q07889 1333 aaPredicted RBP29.28■■■□□ 2.28
ZNF248-204ENST00000395873 HEG1Q9ULI3 1381 aa29.27■■■□□ 2.28
ZNF248-204ENST00000395873 BTBD11A6QL63 1104 aa29.27■■■□□ 2.28
ZNF248-204ENST00000395873 FMNL2Q96PY5 1086 aa29.27■■■□□ 2.28
ZNF248-204ENST00000395873 COL15A1P39059 1388 aa29.26■■■□□ 2.27
ZNF248-204ENST00000395873 DDX10Q13206 875 aaKnown RBP29.25■■■□□ 2.27
ZNF248-204ENST00000395873 N4BP2Q86UW6 1770 aaPredicted RBP29.24■■■□□ 2.27
ZNF248-204ENST00000395873 UTRNP46939 3433 aa29.24■■■□□ 2.27
ZNF248-204ENST00000395873 TGFB2P61812 414 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms