RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 KIF2CQ99661 725 aa13.98□□□□□ -0.17
RAE1-203ENST00000395841 LTN1O94822 1766 aa13.98□□□□□ -0.17
RAE1-203ENST00000395841 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
RAE1-203ENST00000395841 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
RAE1-203ENST00000395841 FKBP5Q13451 457 aaPredicted RBP13.97□□□□□ -0.17
RAE1-203ENST00000395841 NBPF6Q5VWK0 638 aa13.97□□□□□ -0.17
RAE1-203ENST00000395841 NBPF4Q96M43 638 aa13.97□□□□□ -0.17
RAE1-203ENST00000395841 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
RAE1-203ENST00000395841 GNAI3P08754 354 aa13.97□□□□□ -0.17
RAE1-203ENST00000395841 PHRF1Q9P1Y6 1649 aaKnown RBP13.97□□□□□ -0.17
RAE1-203ENST00000395841 SMARCA5O60264 1052 aaPredicted RBP13.96□□□□□ -0.17
RAE1-203ENST00000395841 OTUD7AQ8TE49 926 aaPredicted RBP13.96□□□□□ -0.17
RAE1-203ENST00000395841 GCP02774 474 aa13.96□□□□□ -0.17
RAE1-203ENST00000395841 PXDNLA1KZ92 1463 aa13.96□□□□□ -0.18
RAE1-203ENST00000395841 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
RAE1-203ENST00000395841 MED1Q15648 1581 aaPredicted RBP13.95□□□□□ -0.18
RAE1-203ENST00000395841 APBB1O00213 710 aa13.95□□□□□ -0.18
RAE1-203ENST00000395841 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
RAE1-203ENST00000395841 DDIT3P35638 169 aa13.94□□□□□ -0.18
RAE1-203ENST00000395841 SDSP20132 328 aa13.94□□□□□ -0.18
RAE1-203ENST00000395841 HDGFL1Q5TGJ6 251 aa13.94□□□□□ -0.18
RAE1-203ENST00000395841 OSBPL3Q9H4L5 887 aa13.94□□□□□ -0.18
RAE1-203ENST00000395841 SLIT3O75094 1523 aa13.94□□□□□ -0.18
RAE1-203ENST00000395841 HSP90AB1P08238 724 aaKnown RBP13.94□□□□□ -0.18
RAE1-203ENST00000395841 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
RAE1-203ENST00000395841 HOXB7P09629 217 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 CHMP4AQ9BY43 222 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 MST1RQ04912 1400 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 STRCQ7RTU9 1775 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 MCM4P33991 863 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 ATP8B2P98198 1209 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 CHRNA2Q15822 529 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 ARHGEF25Q86VW2 580 aa13.93□□□□□ -0.18
RAE1-203ENST00000395841 EIF4A1P60842 406 aaKnown RBP13.92□□□□□ -0.18
RAE1-203ENST00000395841 PLEKHO1Q53GL0 409 aaPredicted RBP13.92□□□□□ -0.18
RAE1-203ENST00000395841 LGR6Q9HBX8 967 aa13.92□□□□□ -0.18
RAE1-203ENST00000395841 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
RAE1-203ENST00000395841 AMOTQ4VCS5 1084 aa13.92□□□□□ -0.18
RAE1-203ENST00000395841 NCAPD2Q15021 1401 aa13.92□□□□□ -0.18
RAE1-203ENST00000395841 K7ELQ4 463 aaPredicted RBP13.91□□□□□ -0.18
RAE1-203ENST00000395841 ZNF530Q6P9A1 599 aaPredicted RBP13.91□□□□□ -0.18
RAE1-203ENST00000395841 USP26Q9BXU7 913 aa13.91□□□□□ -0.18
RAE1-203ENST00000395841 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
RAE1-203ENST00000395841 PDE1AP54750 535 aa13.91□□□□□ -0.18
RAE1-203ENST00000395841 LMO7Q8WWI1 1683 aa13.9□□□□□ -0.18
RAE1-203ENST00000395841 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
RAE1-203ENST00000395841 USP44Q9H0E7 712 aa13.9□□□□□ -0.18
RAE1-203ENST00000395841 EXOC6BQ9Y2D4 811 aa13.9□□□□□ -0.18
RAE1-203ENST00000395841 PNMA6EA0A0J9YXQ4 647 aa13.9□□□□□ -0.18
RAE1-203ENST00000395841 CD2BP2O95400 341 aaKnown RBP13.9□□□□□ -0.18
RAE1-203ENST00000395841 TEFQ10587 303 aa13.9□□□□□ -0.18
RAE1-203ENST00000395841 RABEP1Q15276 862 aa13.9□□□□□ -0.18
RAE1-203ENST00000395841 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
RAE1-203ENST00000395841 PHAXQ9H814 394 aaKnown RBP13.9□□□□□ -0.18
RAE1-203ENST00000395841 LRRFIP2Q9Y608 721 aaKnown RBP13.9□□□□□ -0.18
RAE1-203ENST00000395841 UBTFL1P0CB47 393 aaPredicted RBP13.89□□□□□ -0.19
RAE1-203ENST00000395841 CACNA1FO60840 1977 aa13.89□□□□□ -0.19
RAE1-203ENST00000395841 SALL3Q9BXA9 1300 aa13.89□□□□□ -0.19
RAE1-203ENST00000395841 IBTKQ9P2D0 1353 aaPredicted RBP13.89□□□□□ -0.19
RAE1-203ENST00000395841 OVOS2A0A0G2JMS6 1433 aa13.89□□□□□ -0.19
RAE1-203ENST00000395841 BRINP3Q76B58 766 aa13.89□□□□□ -0.19
RAE1-203ENST00000395841 CADPS2Q86UW7 1296 aa13.89□□□□□ -0.19
RAE1-203ENST00000395841 ANKRD24Q8TF21 1146 aa13.89□□□□□ -0.19
RAE1-203ENST00000395841 KDM3BQ7LBC6 1761 aa13.89□□□□□ -0.19
RAE1-203ENST00000395841 BTBD11A6QL63 1104 aa13.88□□□□□ -0.19
RAE1-203ENST00000395841 REC8O95072 547 aa13.88□□□□□ -0.19
RAE1-203ENST00000395841 EIF2S2P20042 333 aaKnown RBP13.88□□□□□ -0.19
RAE1-203ENST00000395841 C1orf141Q5JVX7 400 aa13.88□□□□□ -0.19
RAE1-203ENST00000395841 SRCIN1Q9C0H9 1055 aa13.88□□□□□ -0.19
RAE1-203ENST00000395841 TRPM3Q9HCF6 1732 aaPredicted RBP13.88□□□□□ -0.19
RAE1-203ENST00000395841 RGPD2P0DJD1 1756 aa13.88□□□□□ -0.19
RAE1-203ENST00000395841 HSP90AA1P07900 732 aaKnown RBP13.87□□□□□ -0.19
RAE1-203ENST00000395841 MPRIPQ6WCQ1 1025 aa13.87□□□□□ -0.19
RAE1-203ENST00000395841 KIF1AQ12756 1690 aa13.87□□□□□ -0.19
RAE1-203ENST00000395841 ERC2O15083 957 aa13.87□□□□□ -0.19
RAE1-203ENST00000395841 RNMTO43148 476 aaKnown RBP13.87□□□□□ -0.19
RAE1-203ENST00000395841 CHPF2Q9P2E5 772 aa13.87□□□□□ -0.19
RAE1-203ENST00000395841 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 DDX11L8A8MPP1 907 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 KCNQ3O43525 872 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 MX1P20591 662 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 SSH3Q8TE77 659 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 SLAIN2Q9P270 581 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 XIRP1Q702N8 1843 aaKnown RBP13.86□□□□□ -0.19
RAE1-203ENST00000395841 RAB3GAP1Q15042 981 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 PXDNQ92626 1479 aa13.86□□□□□ -0.19
RAE1-203ENST00000395841 DNAAF4Q8WXU2 420 aa13.85□□□□□ -0.19
RAE1-203ENST00000395841 POLA2Q14181 598 aa13.84□□□□□ -0.19
RAE1-203ENST00000395841 BEND3Q5T5X7 828 aa13.84□□□□□ -0.19
RAE1-203ENST00000395841 TNPO1Q92973 898 aaKnown RBP13.84□□□□□ -0.19
RAE1-203ENST00000395841 AOX1Q06278 1338 aa13.84□□□□□ -0.19
RAE1-203ENST00000395841 RAB11FIP3O75154 756 aa13.84□□□□□ -0.19
RAE1-203ENST00000395841 DBF4Q9UBU7 674 aaPredicted RBP13.84□□□□□ -0.19
RAE1-203ENST00000395841 PI4KAP2A4QPH2 592 aa13.83□□□□□ -0.19
RAE1-203ENST00000395841 TRAK2O60296 914 aa13.83□□□□□ -0.19
RAE1-203ENST00000395841 PI4KAP1Q8N8J0 262 aa13.83□□□□□ -0.19
RAE1-203ENST00000395841 GBP4Q96PP9 640 aa13.83□□□□□ -0.19
RAE1-203ENST00000395841 PPP1R42Q7Z4L9 355 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms