RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 SPG7Q9UQ90 795 aa15.2■□□□□ 0.02
CNIH1-202ENST00000395573 COL5A3P25940 1745 aaPredicted RBP15.2■□□□□ 0.02
CNIH1-202ENST00000395573 EYA1Q99502 592 aa15.19■□□□□ 0.02
CNIH1-202ENST00000395573 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
CNIH1-202ENST00000395573 ZNF831Q5JPB2 1677 aa15.18■□□□□ 0.02
CNIH1-202ENST00000395573 HMGB2P26583 209 aaKnown RBP15.17■□□□□ 0.02
CNIH1-202ENST00000395573 COL23A1Q86Y22 540 aaPredicted RBP15.17■□□□□ 0.02
CNIH1-202ENST00000395573 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
CNIH1-202ENST00000395573 EIF4A2Q14240 407 aaKnown RBP15.16■□□□□ 0.02
CNIH1-202ENST00000395573 NKX1-1Q15270 411 aaPredicted RBP15.16■□□□□ 0.02
CNIH1-202ENST00000395573 PANK3Q9H999 370 aa15.16■□□□□ 0.02
CNIH1-202ENST00000395573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNIH1-202ENST00000395573 SSUH2Q9Y2M2 353 aa15.16■□□□□ 0.02
CNIH1-202ENST00000395573 GPR162Q16538 588 aa15.15■□□□□ 0.02
CNIH1-202ENST00000395573 MSL1Q68DK7 614 aa15.15■□□□□ 0.02
CNIH1-202ENST00000395573 PIGBQ92521 554 aa15.15■□□□□ 0.02
CNIH1-202ENST00000395573 MYH14Q7Z406 1995 aaKnown RBP15.15■□□□□ 0.02
CNIH1-202ENST00000395573 IFNL2Q8IZJ0 200 aa15.14■□□□□ 0.01
CNIH1-202ENST00000395573 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
CNIH1-202ENST00000395573 FLAD1Q8NFF5 587 aa15.14■□□□□ 0.01
CNIH1-202ENST00000395573 AK7Q96M32 723 aa15.14■□□□□ 0.01
CNIH1-202ENST00000395573 TMOD3Q9NYL9 352 aa15.14■□□□□ 0.01
CNIH1-202ENST00000395573 C4AP0C0L4 1744 aa15.14■□□□□ 0.01
CNIH1-202ENST00000395573 PLEKHG2Q9H7P9 1386 aa15.13■□□□□ 0.01
CNIH1-202ENST00000395573 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
CNIH1-202ENST00000395573 PHKG2P15735 406 aa15.13■□□□□ 0.01
CNIH1-202ENST00000395573 NLGN2Q8NFZ4 835 aa15.13■□□□□ 0.01
CNIH1-202ENST00000395573 IGSF1Q8N6C5 1336 aa15.13■□□□□ 0.01
CNIH1-202ENST00000395573 KIF13BQ9NQT8 1826 aa15.13■□□□□ 0.01
CNIH1-202ENST00000395573 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
CNIH1-202ENST00000395573 MORC1Q86VD1 984 aa15.11■□□□□ 0.01
CNIH1-202ENST00000395573 ZNF784Q8NCA9 323 aaPredicted RBP15.11■□□□□ 0.01
CNIH1-202ENST00000395573 LOC102724428A0A0B4J2F2 783 aa15.1■□□□□ 0.01
CNIH1-202ENST00000395573 PHF14O94880 888 aa15.1■□□□□ 0.01
CNIH1-202ENST00000395573 SIK1P57059 783 aa15.1■□□□□ 0.01
CNIH1-202ENST00000395573 ASAP1Q9ULH1 1129 aa15.1■□□□□ 0.01
CNIH1-202ENST00000395573 TJP1Q07157 1748 aa15.09■□□□□ 0.01
CNIH1-202ENST00000395573 LINC00116Q8NCU8 138 aa15.09■□□□□ 0.01
CNIH1-202ENST00000395573 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
CNIH1-202ENST00000395573 CICQ96RK0 1608 aaPredicted RBP15.08■□□□□ 0
CNIH1-202ENST00000395573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.08■□□□□ 0
CNIH1-202ENST00000395573 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
CNIH1-202ENST00000395573 BRCA1P38398 1863 aaKnown RBP15.08■□□□□ 0
CNIH1-202ENST00000395573 KIAA1551Q9HCM1 1747 aa15.07■□□□□ 0
CNIH1-202ENST00000395573 HSP90AB1P08238 724 aaKnown RBP15.07■□□□□ 0
CNIH1-202ENST00000395573 SSFA2P28290 1259 aa15.07■□□□□ 0
CNIH1-202ENST00000395573 ATP6V1AP38606 617 aa15.07■□□□□ 0
CNIH1-202ENST00000395573 PLEKHO1Q53GL0 409 aaPredicted RBP15.07■□□□□ 0
CNIH1-202ENST00000395573 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
CNIH1-202ENST00000395573 SMIM5Q71RC9 77 aa15.07■□□□□ 0
CNIH1-202ENST00000395573 ATG3Q9NT62 314 aa15.07■□□□□ 0
CNIH1-202ENST00000395573 KDM6AO15550 1401 aaPredicted RBP15.07■□□□□ 0
CNIH1-202ENST00000395573 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
CNIH1-202ENST00000395573 ITPK1Q13572 414 aa15.06■□□□□ 0
CNIH1-202ENST00000395573 DCAF5Q96JK2 942 aa15.06■□□□□ 0
CNIH1-202ENST00000395573 CD2APQ9Y5K6 639 aa15.06■□□□□ 0
CNIH1-202ENST00000395573 KDRP35968 1356 aa15.06■□□□□ 0
CNIH1-202ENST00000395573 GNPATO15228 680 aa15.05■□□□□ -0
CNIH1-202ENST00000395573 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -0
CNIH1-202ENST00000395573 AMOTQ4VCS5 1084 aa15.05■□□□□ -0
CNIH1-202ENST00000395573 AEBP1Q8IUX7 1158 aa15.05■□□□□ -0
CNIH1-202ENST00000395573 KIF7Q2M1P5 1343 aa15.04■□□□□ -0
CNIH1-202ENST00000395573 C1orf141Q5JVX7 400 aa15.04■□□□□ -0
CNIH1-202ENST00000395573 GRIN3BO60391 1043 aa15.03■□□□□ -0
CNIH1-202ENST00000395573 SULT6B1Q6IMI4 303 aa15.03■□□□□ -0
CNIH1-202ENST00000395573 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
CNIH1-202ENST00000395573 ARFGEF1Q9Y6D6 1849 aa15.03■□□□□ -0
CNIH1-202ENST00000395573 CABP4P57796 275 aa15.02■□□□□ -0
CNIH1-202ENST00000395573 AMER1Q5JTC6 1135 aaPredicted RBP15.02■□□□□ -0
CNIH1-202ENST00000395573 UBR2Q8IWV8 1755 aa15.02□□□□□ -0.01
CNIH1-202ENST00000395573 ADAMTS7Q9UKP4 1686 aa15.02□□□□□ -0.01
CNIH1-202ENST00000395573 SIPA1L3O60292 1781 aaPredicted RBP15.01□□□□□ -0.01
CNIH1-202ENST00000395573 MTHFSP49914 203 aa15.01□□□□□ -0.01
CNIH1-202ENST00000395573 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
CNIH1-202ENST00000395573 AFDNP55196 1824 aaKnown RBP15.01□□□□□ -0.01
CNIH1-202ENST00000395573 IL13P35225 146 aa15□□□□□ -0.01
CNIH1-202ENST00000395573 SLC4A9Q96Q91 983 aa15□□□□□ -0.01
CNIH1-202ENST00000395573 RTCBQ9Y3I0 505 aaKnown RBP15□□□□□ -0.01
CNIH1-202ENST00000395573 CNTNAP4Q9C0A0 1308 aa14.98□□□□□ -0.01
CNIH1-202ENST00000395573 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
CNIH1-202ENST00000395573 RC3H1Q5TC82 1133 aaKnown RBP14.98□□□□□ -0.01
CNIH1-202ENST00000395573 NFATC2IPQ8NCF5 419 aa14.98□□□□□ -0.01
CNIH1-202ENST00000395573 CEP350Q5VT06 3117 aa14.98□□□□□ -0.01
CNIH1-202ENST00000395573 MRC1P22897 1456 aa14.97□□□□□ -0.01
CNIH1-202ENST00000395573 PTCD1O75127 700 aaKnown RBP14.97□□□□□ -0.01
CNIH1-202ENST00000395573 MMP10P09238 476 aa14.97□□□□□ -0.01
CNIH1-202ENST00000395573 CC2D1BQ5T0F9 858 aaKnown RBP14.97□□□□□ -0.01
CNIH1-202ENST00000395573 PIP4P2Q8N4L2 257 aa14.97□□□□□ -0.01
CNIH1-202ENST00000395573 WWC3Q9ULE0 1092 aa14.97□□□□□ -0.01
CNIH1-202ENST00000395573 GIGYF1O75420 1035 aaPredicted RBP14.96□□□□□ -0.01
CNIH1-202ENST00000395573 RFC4P35249 363 aa14.96□□□□□ -0.01
CNIH1-202ENST00000395573 C1QTNF8P60827 252 aa14.96□□□□□ -0.01
CNIH1-202ENST00000395573 CCDC88AQ3V6T2 1871 aa14.96□□□□□ -0.01
CNIH1-202ENST00000395573 AKAP4Q5JQC9 854 aa14.96□□□□□ -0.01
CNIH1-202ENST00000395573 SBF1O95248 1867 aa14.95□□□□□ -0.02
CNIH1-202ENST00000395573 PER1O15534 1290 aaPredicted RBP14.95□□□□□ -0.02
CNIH1-202ENST00000395573 RPS6KA4O75676 772 aa14.95□□□□□ -0.02
CNIH1-202ENST00000395573 HMOX1P09601 288 aa14.95□□□□□ -0.02
CNIH1-202ENST00000395573 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
CNIH1-202ENST00000395573 ARHGEF1Q92888 912 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms