RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 LRP6O75581 1613 aa28.35■■■□□ 2.13
CACNB1-203ENST00000394310 BTBD11A6QL63 1104 aa28.35■■■□□ 2.13
CACNB1-203ENST00000394310 ELL2O00472 640 aaPredicted RBP28.35■■■□□ 2.13
CACNB1-203ENST00000394310 BCL2L13Q9BXK5 485 aa28.35■■■□□ 2.13
CACNB1-203ENST00000394310 SPATA31A5Q5VU36 1347 aa28.35■■■□□ 2.13
CACNB1-203ENST00000394310 SPATA31A7Q8IWB4 1347 aa28.35■■■□□ 2.13
CACNB1-203ENST00000394310 MS4A1P11836 297 aa28.34■■■□□ 2.13
CACNB1-203ENST00000394310 ZKSCAN2Q63HK3 967 aa28.34■■■□□ 2.13
CACNB1-203ENST00000394310 IPO8O15397 1037 aaKnown RBP28.33■■■□□ 2.13
CACNB1-203ENST00000394310 KRT24Q2M2I5 525 aa28.33■■■□□ 2.13
CACNB1-203ENST00000394310 MRPL50Q8N5N7 158 aaKnown RBP28.33■■■□□ 2.13
CACNB1-203ENST00000394310 ARHGAP45Q92619 1136 aa28.33■■■□□ 2.13
CACNB1-203ENST00000394310 BCL9LQ86UU0 1499 aa28.33■■■□□ 2.13
CACNB1-203ENST00000394310 HOXB7P09629 217 aa28.32■■■□□ 2.12
CACNB1-203ENST00000394310 EIF4A1P60842 406 aaKnown RBP28.32■■■□□ 2.12
CACNB1-203ENST00000394310 MEX3CQ5U5Q3 659 aaKnown RBP28.32■■■□□ 2.12
CACNB1-203ENST00000394310 FRAT1Q92837 279 aaPredicted RBP28.32■■■□□ 2.12
CACNB1-203ENST00000394310 ERVV-2B6SEH9 535 aa28.32■■■□□ 2.12
CACNB1-203ENST00000394310 CANXP27824 592 aaKnown RBP28.32■■■□□ 2.12
CACNB1-203ENST00000394310 BARGINQ6ZT62 677 aa28.32■■■□□ 2.12
CACNB1-203ENST00000394310 CHMP4AQ9BY43 222 aa28.32■■■□□ 2.12
CACNB1-203ENST00000394310 WNK3Q9BYP7 1800 aa28.31■■■□□ 2.12
CACNB1-203ENST00000394310 EXOC6Q8TAG9 804 aa28.31■■■□□ 2.12
CACNB1-203ENST00000394310 HEG1Q9ULI3 1381 aa28.3■■■□□ 2.12
CACNB1-203ENST00000394310 VPS72Q15906 364 aa28.29■■■□□ 2.12
CACNB1-203ENST00000394310 CRBNQ96SW2 442 aa28.29■■■□□ 2.12
CACNB1-203ENST00000394310 NOB1Q9ULX3 412 aaKnown RBP28.29■■■□□ 2.12
CACNB1-203ENST00000394310 ATF7IPQ6VMQ6 1270 aa28.29■■■□□ 2.12
CACNB1-203ENST00000394310 NFATC2IPQ8NCF5 419 aa28.29■■■□□ 2.12
CACNB1-203ENST00000394310 EXOC5O00471 708 aa28.27■■■□□ 2.12
CACNB1-203ENST00000394310 CCDC9Q9Y3X0 531 aaKnown RBP28.27■■■□□ 2.12
CACNB1-203ENST00000394310 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.27■■■□□ 2.12
CACNB1-203ENST00000394310 TRIM27P14373 513 aa28.26■■■□□ 2.11
CACNB1-203ENST00000394310 DDX54Q8TDD1 881 aaKnown RBP28.26■■■□□ 2.11
CACNB1-203ENST00000394310 USP21Q9UK80 565 aa28.26■■■□□ 2.11
CACNB1-203ENST00000394310 CABP4P57796 275 aa28.25■■■□□ 2.11
CACNB1-203ENST00000394310 ZNF790Q6PG37 636 aa28.25■■■□□ 2.11
CACNB1-203ENST00000394310 TNS2Q63HR2 1409 aa28.25■■■□□ 2.11
CACNB1-203ENST00000394310 AAMPQ13685 434 aa28.24■■■□□ 2.11
CACNB1-203ENST00000394310 CCDC30Q5VVM6 783 aa28.24■■■□□ 2.11
CACNB1-203ENST00000394310 DZIP1LQ8IYY4 767 aaKnown RBP28.24■■■□□ 2.11
CACNB1-203ENST00000394310 KCNQ3O43525 872 aa28.24■■■□□ 2.11
CACNB1-203ENST00000394310 PANK1Q8TE04 598 aa28.22■■■□□ 2.11
CACNB1-203ENST00000394310 CACNA1FO60840 1977 aa28.22■■■□□ 2.11
CACNB1-203ENST00000394310 RLBP1P12271 317 aa28.22■■■□□ 2.11
CACNB1-203ENST00000394310 FBXO41Q8TF61 875 aa28.22■■■□□ 2.11
CACNB1-203ENST00000394310 GIGYF1O75420 1035 aaPredicted RBP28.21■■■□□ 2.11
CACNB1-203ENST00000394310 PTPRCP08575 1304 aa28.19■■■□□ 2.1
CACNB1-203ENST00000394310 FTSJ3Q8IY81 847 aaKnown RBP28.19■■■□□ 2.1
CACNB1-203ENST00000394310 AFF2P51816 1311 aa28.19■■■□□ 2.1
CACNB1-203ENST00000394310 STK31Q9BXU1 1019 aa28.19■■■□□ 2.1
CACNB1-203ENST00000394310 API5Q9BZZ5 524 aaKnown RBP28.19■■■□□ 2.1
CACNB1-203ENST00000394310 SLC4A2P04920 1241 aa28.18■■■□□ 2.1
CACNB1-203ENST00000394310 DDB1Q16531 1140 aa28.18■■■□□ 2.1
CACNB1-203ENST00000394310 TNNQ9UQP3 1299 aa28.18■■■□□ 2.1
CACNB1-203ENST00000394310 TCERG1O14776 1098 aaKnown RBP28.17■■■□□ 2.1
CACNB1-203ENST00000394310 MVPQ14764 893 aaKnown RBP28.16■■■□□ 2.1
CACNB1-203ENST00000394310 COG6Q9Y2V7 657 aa28.16■■■□□ 2.1
CACNB1-203ENST00000394310 HDGFL1Q5TGJ6 251 aa28.16■■■□□ 2.1
CACNB1-203ENST00000394310 CLUAP1Q96AJ1 413 aa28.16■■■□□ 2.1
CACNB1-203ENST00000394310 SLC39A6Q13433 755 aa28.15■■■□□ 2.1
CACNB1-203ENST00000394310 TTC5Q8N0Z6 440 aa28.15■■■□□ 2.1
CACNB1-203ENST00000394310 ABCC4O15439 1325 aa28.15■■■□□ 2.1
CACNB1-203ENST00000394310 TOGARAM1Q9Y4F4 1720 aa28.14■■■□□ 2.1
CACNB1-203ENST00000394310 CCDC136Q96JN2 1154 aa28.14■■■□□ 2.1
CACNB1-203ENST00000394310 B4GALNT3Q6L9W6 998 aa28.13■■■□□ 2.09
CACNB1-203ENST00000394310 FMNL2Q96PY5 1086 aa28.13■■■□□ 2.09
CACNB1-203ENST00000394310 ZNF496Q96IT1 587 aaPredicted RBP28.12■■■□□ 2.09
CACNB1-203ENST00000394310 PAPPAQ13219 1627 aa28.12■■■□□ 2.09
CACNB1-203ENST00000394310 FAM98CQ17RN3 349 aaKnown RBP28.11■■■□□ 2.09
CACNB1-203ENST00000394310 DDX19BQ9UMR2 479 aa28.11■■■□□ 2.09
CACNB1-203ENST00000394310 TMOD3Q9NYL9 352 aa28.11■■■□□ 2.09
CACNB1-203ENST00000394310 SNRPA1P09661 255 aaKnown RBP28.1■■■□□ 2.09
CACNB1-203ENST00000394310 TMEM57Q8N5G2 664 aa28.1■■■□□ 2.09
CACNB1-203ENST00000394310 UBR2Q8IWV8 1755 aa28.1■■■□□ 2.09
CACNB1-203ENST00000394310 RGS12O14924 1447 aa28.1■■■□□ 2.09
CACNB1-203ENST00000394310 ATRNO75882 1429 aa28.09■■■□□ 2.09
CACNB1-203ENST00000394310 GJD4Q96KN9 370 aaPredicted RBP28.09■■■□□ 2.09
CACNB1-203ENST00000394310 DBF4Q9UBU7 674 aaPredicted RBP28.09■■■□□ 2.09
CACNB1-203ENST00000394310 TRPC5Q9UL62 973 aaPredicted RBP28.09■■■□□ 2.09
CACNB1-203ENST00000394310 ONECUT3O60422 494 aaPredicted RBP28.08■■■□□ 2.09
CACNB1-203ENST00000394310 MARCH10Q8NA82 808 aaPredicted RBP28.08■■■□□ 2.09
CACNB1-203ENST00000394310 CHMP4BQ9H444 224 aaKnown RBP28.08■■■□□ 2.09
CACNB1-203ENST00000394310 BCL9O00512 1426 aa28.07■■■□□ 2.08
CACNB1-203ENST00000394310 EIF2S2P20042 333 aaKnown RBP28.07■■■□□ 2.08
CACNB1-203ENST00000394310 G2E3Q7L622 706 aa28.07■■■□□ 2.08
CACNB1-203ENST00000394310 ITGB4P16144 1822 aa28.07■■■□□ 2.08
CACNB1-203ENST00000394310 FLIIQ13045 1269 aa28.06■■■□□ 2.08
CACNB1-203ENST00000394310 INTS3Q68E01 1043 aaKnown RBP28.06■■■□□ 2.08
CACNB1-203ENST00000394310 PIGBQ92521 554 aa28.06■■■□□ 2.08
CACNB1-203ENST00000394310 QTRT2Q9H974 415 aaKnown RBP28.06■■■□□ 2.08
CACNB1-203ENST00000394310 KCPQ6ZWJ8 1503 aa28.05■■■□□ 2.08
CACNB1-203ENST00000394310 GLI3P10071 1580 aa28.05■■■□□ 2.08
CACNB1-203ENST00000394310 THSD7AQ9UPZ6 1657 aa28.05■■■□□ 2.08
CACNB1-203ENST00000394310 ITPRIPQ8IWB1 547 aa28.04■■■□□ 2.08
CACNB1-203ENST00000394310 NECTIN2Q92692 538 aa28.04■■■□□ 2.08
CACNB1-203ENST00000394310 CHPF2Q9P2E5 772 aa28.04■■■□□ 2.08
CACNB1-203ENST00000394310 PRAMEF22A3QJZ6 481 aa28.03■■■□□ 2.08
CACNB1-203ENST00000394310 DDX21Q9NR30 783 aaKnown RBP eCLIP28.02■■■□□ 2.08
CACNB1-203ENST00000394310 ZBTB40Q9NUA8 1239 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms