RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 BRPF1P55201 1214 aaPredicted RBP26.46■■□□□ 1.83
CLDND1-202ENST00000394180 RBM42Q9BTD8 480 aaKnown RBP26.46■■□□□ 1.83
CLDND1-202ENST00000394180 BCL11BQ9C0K0 894 aaPredicted RBP26.46■■□□□ 1.83
CLDND1-202ENST00000394180 CHAF1AQ13111 956 aaPredicted RBP26.45■■□□□ 1.82
CLDND1-202ENST00000394180 TAF7LQ5H9L4 462 aa26.45■■□□□ 1.82
CLDND1-202ENST00000394180 NGDNQ8NEJ9 315 aaKnown RBP26.44■■□□□ 1.82
CLDND1-202ENST00000394180 CFAP53Q96M91 514 aa26.44■■□□□ 1.82
CLDND1-202ENST00000394180 RBM27Q9P2N5 1060 aaKnown RBP26.44■■□□□ 1.82
CLDND1-202ENST00000394180 ST18O60284 1047 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 MORC1Q86VD1 984 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 ZNF428Q96B54 188 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 ITSN1Q15811 1721 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 AK9Q5TCS8 1911 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 ALDH1L2Q3SY69 923 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 ESCO1Q5FWF5 840 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 LRRC7Q96NW7 1537 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 AKAP12Q02952 1782 aa26.43■■□□□ 1.82
CLDND1-202ENST00000394180 CCDC66A2RUB6 948 aa26.42■■□□□ 1.82
CLDND1-202ENST00000394180 TMEM57Q8N5G2 664 aa26.42■■□□□ 1.82
CLDND1-202ENST00000394180 ORAI2Q96SN7 254 aa26.42■■□□□ 1.82
CLDND1-202ENST00000394180 EDC4Q6P2E9 1401 aaKnown RBP26.42■■□□□ 1.82
CLDND1-202ENST00000394180 XIRP1Q702N8 1843 aaKnown RBP26.41■■□□□ 1.82
CLDND1-202ENST00000394180 CREBRFQ8IUR6 639 aa26.41■■□□□ 1.82
CLDND1-202ENST00000394180 MON2Q7Z3U7 1717 aa26.41■■□□□ 1.82
CLDND1-202ENST00000394180 NEUROD2Q15784 382 aa26.41■■□□□ 1.82
CLDND1-202ENST00000394180 NME9Q86XW9 330 aa26.41■■□□□ 1.82
CLDND1-202ENST00000394180 SSH1Q8WYL5 1049 aa26.41■■□□□ 1.82
CLDND1-202ENST00000394180 ZDHHC9Q9Y397 364 aa26.41■■□□□ 1.82
CLDND1-202ENST00000394180 RRP7AQ9Y3A4 280 aaKnown RBP26.41■■□□□ 1.82
CLDND1-202ENST00000394180 ZRANB1Q9UGI0 708 aa26.4■■□□□ 1.82
CLDND1-202ENST00000394180 ATF3P18847 181 aa26.39■■□□□ 1.82
CLDND1-202ENST00000394180 PHF8Q9UPP1 1060 aa26.39■■□□□ 1.82
CLDND1-202ENST00000394180 USP6P35125 1406 aa26.38■■□□□ 1.81
CLDND1-202ENST00000394180 NSD2O96028 1365 aa26.37■■□□□ 1.81
CLDND1-202ENST00000394180 USP26Q9BXU7 913 aa26.37■■□□□ 1.81
CLDND1-202ENST00000394180 NOB1Q9ULX3 412 aaKnown RBP26.37■■□□□ 1.81
CLDND1-202ENST00000394180 MSH6P52701 1360 aa26.36■■□□□ 1.81
CLDND1-202ENST00000394180 ZNF771Q7L3S4 317 aaPredicted RBP26.36■■□□□ 1.81
CLDND1-202ENST00000394180 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
CLDND1-202ENST00000394180 TTC21BQ7Z4L5 1316 aa26.35■■□□□ 1.81
CLDND1-202ENST00000394180 CDK11BP21127 795 aaKnown RBP26.35■■□□□ 1.81
CLDND1-202ENST00000394180 C1orf167Q5SNV9 1468 aa26.35■■□□□ 1.81
CLDND1-202ENST00000394180 KIF20BQ96Q89 1820 aa26.35■■□□□ 1.81
CLDND1-202ENST00000394180 FBLN1P23142 703 aa26.34■■□□□ 1.81
CLDND1-202ENST00000394180 MCM2P49736 904 aa26.34■■□□□ 1.81
CLDND1-202ENST00000394180 EXOSC9Q06265 439 aaKnown RBP26.34■■□□□ 1.81
CLDND1-202ENST00000394180 ANKRD45Q5TZF3 282 aa26.34■■□□□ 1.81
CLDND1-202ENST00000394180 DNAJC2Q99543 621 aaKnown RBP26.34■■□□□ 1.81
CLDND1-202ENST00000394180 NRKQ7Z2Y5 1582 aa26.33■■□□□ 1.81
CLDND1-202ENST00000394180 PKP1Q13835 747 aa26.33■■□□□ 1.81
CLDND1-202ENST00000394180 MST1RQ04912 1400 aa26.33■■□□□ 1.81
CLDND1-202ENST00000394180 FOXO3O43524 673 aa26.33■■□□□ 1.8
CLDND1-202ENST00000394180 CADPS2Q86UW7 1296 aa26.33■■□□□ 1.8
CLDND1-202ENST00000394180 KIAA1524Q8TCG1 905 aa26.33■■□□□ 1.8
CLDND1-202ENST00000394180 ARHGAP45Q92619 1136 aa26.33■■□□□ 1.8
CLDND1-202ENST00000394180 INTS3Q68E01 1043 aaKnown RBP26.32■■□□□ 1.8
CLDND1-202ENST00000394180 TSPYL1Q9H0U9 437 aa26.32■■□□□ 1.8
CLDND1-202ENST00000394180 CGNQ9P2M7 1197 aaKnown RBP26.32■■□□□ 1.8
CLDND1-202ENST00000394180 DCCP43146 1447 aa26.32■■□□□ 1.8
CLDND1-202ENST00000394180 SSH2Q76I76 1423 aa26.32■■□□□ 1.8
CLDND1-202ENST00000394180 BRD1O95696 1058 aa26.31■■□□□ 1.8
CLDND1-202ENST00000394180 RNF214Q8ND24 703 aa26.31■■□□□ 1.8
CLDND1-202ENST00000394180 TSC1Q92574 1164 aa26.31■■□□□ 1.8
CLDND1-202ENST00000394180 U2AF2P26368 475 aaKnown RBP eCLIP26.3■■□□□ 1.81e-8■■□□□ 13.8
CLDND1-202ENST00000394180 MORC2Q9Y6X9 1032 aaPredicted RBP26.3■■□□□ 1.8
CLDND1-202ENST00000394180 SPDYE4A6NLX3 237 aa26.29■■□□□ 1.8
CLDND1-202ENST00000394180 NSFL1CQ9UNZ2 370 aaKnown RBP26.29■■□□□ 1.8
CLDND1-202ENST00000394180 ANKRD26Q9UPS8 1709 aa26.29■■□□□ 1.8
CLDND1-202ENST00000394180 RIOK3O14730 519 aaKnown RBP26.29■■□□□ 1.8
CLDND1-202ENST00000394180 DDX41Q9UJV9 622 aaKnown RBP26.29■■□□□ 1.8
CLDND1-202ENST00000394180 SLFN14P0C7P3 912 aa26.28■■□□□ 1.8
CLDND1-202ENST00000394180 USP25Q9UHP3 1055 aa26.28■■□□□ 1.8
CLDND1-202ENST00000394180 CTNNA3Q9UI47 895 aa26.28■■□□□ 1.8
CLDND1-202ENST00000394180 ZBTB7BO15156 539 aaPredicted RBP26.27■■□□□ 1.8
CLDND1-202ENST00000394180 PSME1Q06323 249 aa26.27■■□□□ 1.8
CLDND1-202ENST00000394180 JARID2Q92833 1246 aaPredicted RBP26.27■■□□□ 1.8
CLDND1-202ENST00000394180 INTS4Q96HW7 963 aaKnown RBP26.27■■□□□ 1.8
CLDND1-202ENST00000394180 MTHFSP49914 203 aa26.27■■□□□ 1.8
CLDND1-202ENST00000394180 DDX17Q92841 729 aaKnown RBP26.27■■□□□ 1.8
CLDND1-202ENST00000394180 ADCY5O95622 1261 aa26.26■■□□□ 1.79
CLDND1-202ENST00000394180 CASC1Q6TDU7 716 aa26.26■■□□□ 1.79
CLDND1-202ENST00000394180 TMEM87AQ8NBN3 555 aa26.26■■□□□ 1.79
CLDND1-202ENST00000394180 COG3Q96JB2 828 aa26.26■■□□□ 1.79
CLDND1-202ENST00000394180 KIF24Q5T7B8 1368 aa26.25■■□□□ 1.79
CLDND1-202ENST00000394180 NUTM2GQ5VZR2 741 aa26.25■■□□□ 1.79
CLDND1-202ENST00000394180 ZGPATQ8N5A5 531 aaKnown RBP26.25■■□□□ 1.79
CLDND1-202ENST00000394180 TIGD1Q96MW7 591 aa26.25■■□□□ 1.79
CLDND1-202ENST00000394180 GOLGA6L6A8MZA4 724 aa26.24■■□□□ 1.79
CLDND1-202ENST00000394180 CUL4AQ13619 759 aa26.24■■□□□ 1.79
CLDND1-202ENST00000394180 CALCOCO1Q9P1Z2 691 aa26.24■■□□□ 1.79
CLDND1-202ENST00000394180 KDM4AO75164 1064 aa26.23■■□□□ 1.79
CLDND1-202ENST00000394180 REC8O95072 547 aa26.23■■□□□ 1.79
CLDND1-202ENST00000394180 IRX5P78411 483 aaPredicted RBP26.23■■□□□ 1.79
CLDND1-202ENST00000394180 TTC22Q5TAA0 569 aa26.23■■□□□ 1.79
CLDND1-202ENST00000394180 ZNF830Q96NB3 372 aaPredicted RBP26.23■■□□□ 1.79
CLDND1-202ENST00000394180 TTC12Q9H892 705 aaPredicted RBP26.23■■□□□ 1.79
CLDND1-202ENST00000394180 TTC21AQ8NDW8 1320 aa26.23■■□□□ 1.79
CLDND1-202ENST00000394180 CCDC183Q5T5S1 534 aa26.22■■□□□ 1.79
CLDND1-202ENST00000394180 TSR2Q969E8 191 aaKnown RBP26.22■■□□□ 1.79
CLDND1-202ENST00000394180 SOX12O15370 315 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms