RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 FLIIQ13045 1269 aa17.08■□□□□ 0.32
GAPVD1-205ENST00000394084 LTV1Q96GA3 475 aaPredicted RBP17.08■□□□□ 0.32
GAPVD1-205ENST00000394084 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.32
GAPVD1-205ENST00000394084 ZDHHC9Q9Y397 364 aa17.08■□□□□ 0.32
GAPVD1-205ENST00000394084 FLT4P35916 1363 aa17.07■□□□□ 0.32
GAPVD1-205ENST00000394084 CWC22Q9HCG8 908 aaKnown RBP17.07■□□□□ 0.32
GAPVD1-205ENST00000394084 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
GAPVD1-205ENST00000394084 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
GAPVD1-205ENST00000394084 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
GAPVD1-205ENST00000394084 RBM27Q9P2N5 1060 aaKnown RBP17.07■□□□□ 0.32
GAPVD1-205ENST00000394084 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
GAPVD1-205ENST00000394084 PTPRUQ92729 1446 aa17.06■□□□□ 0.32
GAPVD1-205ENST00000394084 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
GAPVD1-205ENST00000394084 SBNO1A3KN83 1393 aa17.06■□□□□ 0.32
GAPVD1-205ENST00000394084 MX1P20591 662 aa17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 NLRP6P59044 892 aa17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 ANO2Q9NQ90 1003 aa17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 PALD1Q9ULE6 856 aa17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 UBR1Q8IWV7 1749 aa17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 TOPAZ1Q8N9V7 1692 aa17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
GAPVD1-205ENST00000394084 CCDC173Q0VFZ6 552 aa17.04■□□□□ 0.32
GAPVD1-205ENST00000394084 CCDC30Q5VVM6 783 aa17.04■□□□□ 0.32
GAPVD1-205ENST00000394084 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
GAPVD1-205ENST00000394084 IGSF1Q8N6C5 1336 aa17.04■□□□□ 0.32
GAPVD1-205ENST00000394084 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
GAPVD1-205ENST00000394084 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
GAPVD1-205ENST00000394084 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
GAPVD1-205ENST00000394084 IL1RAPL2Q9NP60 686 aa17.03■□□□□ 0.32
GAPVD1-205ENST00000394084 PLEKHG1Q9ULL1 1385 aa17.03■□□□□ 0.32
GAPVD1-205ENST00000394084 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
GAPVD1-205ENST00000394084 GNAI3P08754 354 aa17.03■□□□□ 0.32
GAPVD1-205ENST00000394084 GPT2Q8TD30 523 aa17.03■□□□□ 0.32
GAPVD1-205ENST00000394084 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
GAPVD1-205ENST00000394084 KDRP35968 1356 aa17.02■□□□□ 0.32
GAPVD1-205ENST00000394084 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.32
GAPVD1-205ENST00000394084 SALL3Q9BXA9 1300 aa17.02■□□□□ 0.32
GAPVD1-205ENST00000394084 ZNF445P59923 1031 aa17.02■□□□□ 0.31
GAPVD1-205ENST00000394084 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.31
GAPVD1-205ENST00000394084 EID1Q9Y6B2 187 aa17.02■□□□□ 0.31
GAPVD1-205ENST00000394084 IL17REQ8NFR9 667 aa17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 RBSNQ9H1K0 784 aa17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 IBTKQ9P2D0 1353 aaPredicted RBP17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 CHMLP26374 656 aa17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 NSFL1CQ9UNZ2 370 aaKnown RBP17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 MAP4K4O95819 1239 aaPredicted RBP17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 PPP1R9BQ96SB3 815 aa17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 UPF3BQ9BZI7 483 aaKnown RBP17.01■□□□□ 0.31
GAPVD1-205ENST00000394084 MCCP23508 829 aa17■□□□□ 0.31
GAPVD1-205ENST00000394084 NUTM1Q86Y26 1132 aa17■□□□□ 0.31
GAPVD1-205ENST00000394084 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
GAPVD1-205ENST00000394084 FMN2Q9NZ56 1722 aa17■□□□□ 0.31
GAPVD1-205ENST00000394084 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
GAPVD1-205ENST00000394084 HOXC9P31274 260 aa16.99■□□□□ 0.31
GAPVD1-205ENST00000394084 USP44Q9H0E7 712 aa16.99■□□□□ 0.31
GAPVD1-205ENST00000394084 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
GAPVD1-205ENST00000394084 IL25Q9H293 177 aa16.98■□□□□ 0.31
GAPVD1-205ENST00000394084 TMEM63CQ9P1W3 806 aa16.98■□□□□ 0.31
GAPVD1-205ENST00000394084 HDGFL1Q5TGJ6 251 aa16.98■□□□□ 0.31
GAPVD1-205ENST00000394084 SYCE3A1L190 88 aa16.97■□□□□ 0.31
GAPVD1-205ENST00000394084 RGPD8O14715 1765 aaPredicted RBP16.97■□□□□ 0.31
GAPVD1-205ENST00000394084 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
GAPVD1-205ENST00000394084 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
GAPVD1-205ENST00000394084 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
GAPVD1-205ENST00000394084 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
GAPVD1-205ENST00000394084 MAP3K5Q99683 1374 aa16.96■□□□□ 0.31
GAPVD1-205ENST00000394084 ZBTB7CA1YPR0 619 aa16.96■□□□□ 0.31
GAPVD1-205ENST00000394084 ZSCAN30Q86W11 494 aa16.95■□□□□ 0.3
GAPVD1-205ENST00000394084 PPP1R42Q7Z4L9 355 aa16.95■□□□□ 0.3
GAPVD1-205ENST00000394084 MCM2P49736 904 aa16.95■□□□□ 0.3
GAPVD1-205ENST00000394084 STAP2Q9UGK3 403 aa16.95■□□□□ 0.3
GAPVD1-205ENST00000394084 BRD1O95696 1058 aa16.94■□□□□ 0.3
GAPVD1-205ENST00000394084 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
GAPVD1-205ENST00000394084 MSNP26038 577 aaKnown RBP16.94■□□□□ 0.3
GAPVD1-205ENST00000394084 TPRNQ4KMQ1 711 aa16.94■□□□□ 0.3
GAPVD1-205ENST00000394084 GDPD2Q9HCC8 539 aa16.94■□□□□ 0.3
GAPVD1-205ENST00000394084 DIP2AQ14689 1571 aa16.94■□□□□ 0.3
GAPVD1-205ENST00000394084 FAM208AQ9UK61 1670 aaKnown RBP16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 CUL4AQ13619 759 aa16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 RNF214Q8ND24 703 aa16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 SRCIN1Q9C0H9 1055 aa16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 ANXA1P04083 346 aa16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
GAPVD1-205ENST00000394084 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
GAPVD1-205ENST00000394084 ANAPC15P60006 121 aa16.92■□□□□ 0.3
GAPVD1-205ENST00000394084 SSH3Q8TE77 659 aa16.92■□□□□ 0.3
GAPVD1-205ENST00000394084 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
GAPVD1-205ENST00000394084 NBPF7P0C2Y1 421 aaPredicted RBP16.92■□□□□ 0.3
GAPVD1-205ENST00000394084 LRSAM1Q6UWE0 723 aa16.92■□□□□ 0.3
GAPVD1-205ENST00000394084 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms