RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ANP32EQ9BTT0 268 aa4.53□□□□□ -1.68
XRN1-202ENST00000392981 DYTNA2CJ06 578 aa4.53□□□□□ -1.68
XRN1-202ENST00000392981 FOSP01100 380 aaPredicted RBP4.53□□□□□ -1.68
XRN1-202ENST00000392981 CD44P16070 742 aaKnown RBP4.53□□□□□ -1.68
XRN1-202ENST00000392981 PTK7Q13308 1070 aa4.53□□□□□ -1.68
XRN1-202ENST00000392981 EGFLAMQ63HQ2 1017 aa4.53□□□□□ -1.68
XRN1-202ENST00000392981 HOMER2Q9NSB8 354 aa4.53□□□□□ -1.68
XRN1-202ENST00000392981 SFMBT1Q9UHJ3 866 aa4.53□□□□□ -1.68
XRN1-202ENST00000392981 COMMD10Q9Y6G5 202 aa4.53□□□□□ -1.68
XRN1-202ENST00000392981 SF3B2Q13435 895 aaKnown RBP4.52□□□□□ -1.69
XRN1-202ENST00000392981 NOM1Q5C9Z4 860 aaKnown RBP4.52□□□□□ -1.69
XRN1-202ENST00000392981 ST7Q9NRC1 585 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 CFAP99D6REC4 459 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 FAM13AO94988 1023 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 HCLS1P14317 486 aaPredicted RBP4.52□□□□□ -1.69
XRN1-202ENST00000392981 HSD3B2P26439 372 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 C6orf132Q5T0Z8 1188 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 TMC7Q7Z402 723 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 VPS37AQ8NEZ2 397 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 FAM174AQ8TBP5 190 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 RNF19AQ9NV58 838 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 MPSTP25325 297 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 NGLY1Q96IV0 654 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 TRPC6Q9Y210 931 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 NBPF26B4DH59 902 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 SWI5Q1ZZU3 235 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 PLEKHG6Q3KR16 790 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 UBA5Q9GZZ9 404 aa4.52□□□□□ -1.69
XRN1-202ENST00000392981 DDX56Q9NY93 547 aaKnown RBP4.52□□□□□ -1.69
XRN1-202ENST00000392981 LMNB1P20700 586 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 ATL2Q8NHH9 583 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 FAM13BQ9NYF5 915 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 PCDHGA10Q9Y5H3 936 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 CCER2I3L3R5 266 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 PTMAP06454 111 aaKnown RBP4.51□□□□□ -1.69
XRN1-202ENST00000392981 ELOAQ14241 798 aaKnown RBP4.51□□□□□ -1.69
XRN1-202ENST00000392981 PPP2R5EQ16537 467 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 FBXO33Q7Z6M2 555 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 SMC5Q8IY18 1101 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 TMTC2Q8N394 836 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 KCNH8Q96L42 1107 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 MINDY4BA8MYZ0 360 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 PER1O15534 1290 aaPredicted RBP4.51□□□□□ -1.69
XRN1-202ENST00000392981 USP46P62068 366 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 WWC2Q6AWC2 1192 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 RGL4Q8IZJ4 473 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 NBPF7P0C2Y1 421 aaPredicted RBP4.51□□□□□ -1.69
XRN1-202ENST00000392981 PCSK2P16519 638 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 PRSS12P56730 875 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 TSEN2Q8NCE0 465 aaKnown RBP4.51□□□□□ -1.69
XRN1-202ENST00000392981 MS4A3Q96HJ5 214 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 TINF2Q9BSI4 451 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 ATG3Q9NT62 314 aa4.51□□□□□ -1.69
XRN1-202ENST00000392981 CXXC1Q9P0U4 656 aaPredicted RBP4.51□□□□□ -1.69
XRN1-202ENST00000392981 ZPR1O75312 459 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 VAMP1P23763 118 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 PTGER2P43116 358 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 PACS2Q86VP3 889 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 NLGN1Q8N2Q7 840 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 IRF2BPLQ9H1B7 796 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 MAFGO15525 162 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 PRPF40AO75400 957 aaKnown RBP4.5□□□□□ -1.69
XRN1-202ENST00000392981 FAM160A1Q05DH4 1040 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 ANKS3Q6ZW76 656 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 NKX2-3Q8TAU0 364 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 NRDCO43847 1150 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 EIF3JO75822 258 aaKnown RBP4.5□□□□□ -1.69
XRN1-202ENST00000392981 LDHAP00338 332 aaKnown RBP4.5□□□□□ -1.69
XRN1-202ENST00000392981 SYCP2LQ5T4T6 812 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 PRKD2Q9BZL6 878 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 CHMP3Q9Y3E7 222 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 TBX22Q9Y458 520 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 EHHADHQ08426 723 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 SIX5Q8N196 739 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 ZDHHC16Q969W1 377 aa4.5□□□□□ -1.69
XRN1-202ENST00000392981 IFIT2P09913 472 aaKnown RBP4.49□□□□□ -1.69
XRN1-202ENST00000392981 CAPN12Q6ZSI9 719 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 CCDC24Q8N4L8 307 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 UBR7Q8N806 425 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 APPBP2Q92624 585 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 SETDB2Q96T68 719 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 EIF4BP23588 611 aaKnown RBP4.49□□□□□ -1.69
XRN1-202ENST00000392981 NASPP49321 788 aaPredicted RBP4.49□□□□□ -1.69
XRN1-202ENST00000392981 CREBRFQ8IUR6 639 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 TSR2Q969E8 191 aaKnown RBP4.49□□□□□ -1.69
XRN1-202ENST00000392981 TBX4P57082 545 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 FANCCQ00597 558 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 SCG3Q8WXD2 468 aaKnown RBP4.49□□□□□ -1.69
XRN1-202ENST00000392981 MAP3K11Q16584 847 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 ANO1Q5XXA6 986 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.49□□□□□ -1.696e-7■■■■■ 127.6
XRN1-202ENST00000392981 PFDN2Q9UHV9 154 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 INTUQ9ULD6 942 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 SPG7Q9UQ90 795 aa4.49□□□□□ -1.69
XRN1-202ENST00000392981 LARP1BQ659C4 914 aaKnown RBP4.48□□□□□ -1.69
XRN1-202ENST00000392981 HDGFL2Q7Z4V5 671 aaPredicted RBP4.48□□□□□ -1.69
XRN1-202ENST00000392981 CRBNQ96SW2 442 aa4.48□□□□□ -1.69
XRN1-202ENST00000392981 RBSNQ9H1K0 784 aa4.48□□□□□ -1.69
XRN1-202ENST00000392981 MCM4P33991 863 aa4.48□□□□□ -1.69
XRN1-202ENST00000392981 SLAIN2Q9P270 581 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms