RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
SCN3B-202ENST00000392770 FIBPO43427 364 aa19.75■□□□□ 0.75
SCN3B-202ENST00000392770 FLT4P35916 1363 aa19.75■□□□□ 0.75
SCN3B-202ENST00000392770 PLEKHH1Q9ULM0 1364 aa19.75■□□□□ 0.75
SCN3B-202ENST00000392770 MBD3O95983 291 aa19.75■□□□□ 0.75
SCN3B-202ENST00000392770 AKAP2Q9Y2D5 859 aa19.74■□□□□ 0.75
SCN3B-202ENST00000392770 ZNF652Q9Y2D9 606 aa19.74■□□□□ 0.75
SCN3B-202ENST00000392770 EXOC5O00471 708 aa19.74■□□□□ 0.75
SCN3B-202ENST00000392770 LETM1O95202 739 aaPredicted RBP19.74■□□□□ 0.75
SCN3B-202ENST00000392770 PCMTD1Q96MG8 357 aaPredicted RBP19.74■□□□□ 0.75
SCN3B-202ENST00000392770 ZNF396Q96N95 335 aaPredicted RBP19.74■□□□□ 0.75
SCN3B-202ENST00000392770 MRPL50Q8N5N7 158 aaKnown RBP19.74■□□□□ 0.75
SCN3B-202ENST00000392770 ANKRD20A12PQ8NF67 263 aa19.74■□□□□ 0.75
SCN3B-202ENST00000392770 BOLA2Q9H3K6 86 aa19.74■□□□□ 0.75
SCN3B-202ENST00000392770 CEBPZQ03701 1054 aaKnown RBP19.73■□□□□ 0.75
SCN3B-202ENST00000392770 MTHFSDQ2M296 383 aaKnown RBP19.73■□□□□ 0.75
SCN3B-202ENST00000392770 NOC3LQ8WTT2 800 aaKnown RBP19.73■□□□□ 0.75
SCN3B-202ENST00000392770 MRE11P49959 708 aa19.73■□□□□ 0.75
SCN3B-202ENST00000392770 C8orf58Q8NAV2 365 aa19.73■□□□□ 0.75
SCN3B-202ENST00000392770 WDR33Q9C0J8 1336 aaKnown RBP19.73■□□□□ 0.75
SCN3B-202ENST00000392770 CCDC69A6NI79 296 aa19.73■□□□□ 0.75
SCN3B-202ENST00000392770 CASTP20810 708 aaKnown RBP19.73■□□□□ 0.75
SCN3B-202ENST00000392770 ARHGAP45Q92619 1136 aa19.73■□□□□ 0.75
SCN3B-202ENST00000392770 NPHP3Q7Z494 1330 aa19.73■□□□□ 0.75
SCN3B-202ENST00000392770 NASPP49321 788 aaPredicted RBP19.73■□□□□ 0.75
SCN3B-202ENST00000392770 CCDC8Q9H0W5 538 aaPredicted RBP19.73■□□□□ 0.75
SCN3B-202ENST00000392770 KCNA6P17658 529 aa19.72■□□□□ 0.75
SCN3B-202ENST00000392770 RAI14Q9P0K7 980 aa19.72■□□□□ 0.75
SCN3B-202ENST00000392770 ZBTB3Q9H5J0 574 aa19.72■□□□□ 0.75
SCN3B-202ENST00000392770 CTNNA3Q9UI47 895 aa19.72■□□□□ 0.75
SCN3B-202ENST00000392770 A0A087WZG4 1122 aa19.72■□□□□ 0.75
SCN3B-202ENST00000392770 PI4KAP2A4QPH2 592 aa19.72■□□□□ 0.75
SCN3B-202ENST00000392770 IDH1O75874 414 aaKnown RBP19.72■□□□□ 0.75
SCN3B-202ENST00000392770 PI4KAP1Q8N8J0 262 aa19.72■□□□□ 0.75
SCN3B-202ENST00000392770 RNF214Q8ND24 703 aa19.71■□□□□ 0.75
SCN3B-202ENST00000392770 ZSCAN31Q96LW9 406 aaPredicted RBP19.71■□□□□ 0.75
SCN3B-202ENST00000392770 SDF4Q9BRK5 362 aa19.71■□□□□ 0.75
SCN3B-202ENST00000392770 CHPF2Q9P2E5 772 aa19.71■□□□□ 0.75
SCN3B-202ENST00000392770 KDM5AP29375 1690 aaKnown RBP19.71■□□□□ 0.75
SCN3B-202ENST00000392770 KRT32Q14532 448 aa19.71■□□□□ 0.75
SCN3B-202ENST00000392770 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
SCN3B-202ENST00000392770 AKAP4Q5JQC9 854 aa19.71■□□□□ 0.75
SCN3B-202ENST00000392770 ATP2B1P20020 1258 aa19.7■□□□□ 0.74
SCN3B-202ENST00000392770 HSP90AB3PQ58FF7 597 aa19.7■□□□□ 0.74
SCN3B-202ENST00000392770 TSPY26PQ9H489 355 aa19.7■□□□□ 0.74
SCN3B-202ENST00000392770 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
SCN3B-202ENST00000392770 ANXA1P04083 346 aa19.7■□□□□ 0.74
SCN3B-202ENST00000392770 NAT10Q9H0A0 1025 aaKnown RBP19.7■□□□□ 0.74
SCN3B-202ENST00000392770 SNRPA1P09661 255 aaKnown RBP19.7■□□□□ 0.74
SCN3B-202ENST00000392770 TDO2P48775 406 aa19.7■□□□□ 0.74
SCN3B-202ENST00000392770 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
SCN3B-202ENST00000392770 TRMT112Q9UI30 125 aaKnown RBP19.7■□□□□ 0.74
SCN3B-202ENST00000392770 IKQ13123 557 aaPredicted RBP19.7■□□□□ 0.74
SCN3B-202ENST00000392770 LARP1BQ659C4 914 aaKnown RBP19.7■□□□□ 0.74
SCN3B-202ENST00000392770 PRPF40BQ6NWY9 871 aaKnown RBP19.7■□□□□ 0.74
SCN3B-202ENST00000392770 ZPR1O75312 459 aa19.69■□□□□ 0.74
SCN3B-202ENST00000392770 IFIT5Q13325 482 aaKnown RBP19.69■□□□□ 0.74
SCN3B-202ENST00000392770 SF3B2Q13435 895 aaKnown RBP19.69■□□□□ 0.74
SCN3B-202ENST00000392770 ZNF592Q92610 1267 aa19.69■□□□□ 0.74
SCN3B-202ENST00000392770 TBX22Q9Y458 520 aa19.69■□□□□ 0.74
SCN3B-202ENST00000392770 IFIT1P09914 478 aaKnown RBP19.69■□□□□ 0.74
SCN3B-202ENST00000392770 STK38Q15208 465 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 ATP5J2-PTCD1G3V325 749 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 RSPH6AQ9H0K4 717 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 HDAC1Q13547 482 aaPredicted RBP19.68■□□□□ 0.74
SCN3B-202ENST00000392770 NUP133Q8WUM0 1156 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 EDC4Q6P2E9 1401 aaKnown RBP19.68■□□□□ 0.74
SCN3B-202ENST00000392770 CFAP65Q6ZU64 1925 aaKnown RBP19.68■□□□□ 0.74
SCN3B-202ENST00000392770 KINO60870 393 aaKnown RBP19.68■□□□□ 0.74
SCN3B-202ENST00000392770 PPP1R42Q7Z4L9 355 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 PHACTR3Q96KR7 559 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 YEATS2Q9ULM3 1422 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 PLXNC1O60486 1568 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 NGLY1Q96IV0 654 aa19.68■□□□□ 0.74
SCN3B-202ENST00000392770 IMMTQ16891 758 aaKnown RBP19.67■□□□□ 0.74
SCN3B-202ENST00000392770 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
SCN3B-202ENST00000392770 GPTP24298 496 aa19.67■□□□□ 0.74
SCN3B-202ENST00000392770 HOXC9P31274 260 aa19.67■□□□□ 0.74
SCN3B-202ENST00000392770 NUCB1Q02818 461 aa19.67■□□□□ 0.74
SCN3B-202ENST00000392770 ZCRB1Q8TBF4 217 aaKnown RBP19.67■□□□□ 0.74
SCN3B-202ENST00000392770 TEX13AQ9BXU3 409 aaPredicted RBP19.67■□□□□ 0.74
SCN3B-202ENST00000392770 CWC25Q9NXE8 425 aaPredicted RBP19.67■□□□□ 0.74
SCN3B-202ENST00000392770 CIZ1Q9ULV3 898 aaPredicted RBP19.67■□□□□ 0.74
SCN3B-202ENST00000392770 CABLES1Q8TDN4 633 aa19.67■□□□□ 0.74
SCN3B-202ENST00000392770 NPC1L1Q9UHC9 1359 aa19.66■□□□□ 0.74
SCN3B-202ENST00000392770 TRIM22Q8IYM9 498 aa19.66■□□□□ 0.74
SCN3B-202ENST00000392770 C19orf44Q9H6X5 657 aa19.66■□□□□ 0.74
SCN3B-202ENST00000392770 MAP3K5Q99683 1374 aa19.66■□□□□ 0.74
SCN3B-202ENST00000392770 MEIS3Q99687 375 aa19.66■□□□□ 0.74
SCN3B-202ENST00000392770 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
SCN3B-202ENST00000392770 EYA1Q99502 592 aa19.65■□□□□ 0.74
SCN3B-202ENST00000392770 ANKRD18BA2A2Z9 1011 aa19.65■□□□□ 0.74
SCN3B-202ENST00000392770 TBC1D9Q6ZT07 1266 aa19.65■□□□□ 0.74
SCN3B-202ENST00000392770 TNNQ9UQP3 1299 aa19.65■□□□□ 0.74
SCN3B-202ENST00000392770 KDM5DQ9BY66 1539 aa19.65■□□□□ 0.74
SCN3B-202ENST00000392770 TTC22Q5TAA0 569 aa19.65■□□□□ 0.74
SCN3B-202ENST00000392770 ZMYM4Q5VZL5 1548 aa19.65■□□□□ 0.74
SCN3B-202ENST00000392770 SLC39A6Q13433 755 aa19.64■□□□□ 0.74
SCN3B-202ENST00000392770 BMP2KLQ5H9B9 411 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms