RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 SDSP20132 328 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 NCBP3Q53F19 620 aaKnown RBP10.14□□□□□ -0.79
PKP4-202ENST00000389759 PLEKHO1Q53GL0 409 aaPredicted RBP10.14□□□□□ -0.79
PKP4-202ENST00000389759 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
PKP4-202ENST00000389759 CAMSAP2Q08AD1 1489 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 CEP135Q66GS9 1140 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 TIGD1Q96MW7 591 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 KDM2BQ8NHM5 1336 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 GOLGA6L10A6NI86 522 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 F6X3S4 739 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 RRP12Q5JTH9 1297 aaKnown RBP10.14□□□□□ -0.79
PKP4-202ENST00000389759 MCM10Q7L590 875 aa10.14□□□□□ -0.79
PKP4-202ENST00000389759 GJB2P29033 226 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 HSP90AB3PQ58FF7 597 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 CCDC181Q5TID7 509 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 ARHGAP45Q92619 1136 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 NOL10Q9BSC4 688 aaKnown RBP10.13□□□□□ -0.79
PKP4-202ENST00000389759 CRACR2AQ9BSW2 395 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 GTPBP4Q9BZE4 634 aaKnown RBP10.13□□□□□ -0.79
PKP4-202ENST00000389759 CDKL5O76039 1030 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 EPS15P42566 896 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 CCDC158Q5M9N0 1113 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 TXNDC2Q86VQ3 553 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 MIS18AQ9NYP9 233 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 MYO6Q9UM54 1294 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 ZSCAN22P10073 491 aaPredicted RBP10.13□□□□□ -0.79
PKP4-202ENST00000389759 TOP1P11387 765 aaKnown RBP10.13□□□□□ -0.79
PKP4-202ENST00000389759 FAM193AP78312 1265 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 JAKMIP3Q5VZ66 844 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 CCDC186Q7Z3E2 898 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 FAM200AQ8TCP9 573 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 CTNNA3Q9UI47 895 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 NOL7Q9UMY1 257 aaKnown RBP10.13□□□□□ -0.79
PKP4-202ENST00000389759 RALGAPBQ86X10 1494 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 SNW1Q13573 536 aaKnown RBP10.13□□□□□ -0.79
PKP4-202ENST00000389759 STK11IPQ8N1F8 1099 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 ABTB2Q8N961 1025 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 NLRP2Q9NX02 1062 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 TNNQ9UQP3 1299 aa10.13□□□□□ -0.79
PKP4-202ENST00000389759 SCAF11Q99590 1463 aaKnown RBP10.12□□□□□ -0.79
PKP4-202ENST00000389759 KIF4BQ2VIQ3 1234 aa10.12□□□□□ -0.79
PKP4-202ENST00000389759 USP48Q86UV5 1035 aa10.12□□□□□ -0.79
PKP4-202ENST00000389759 RTEL1-TNFRSF6BF6WH68 1400 aa10.12□□□□□ -0.79
PKP4-202ENST00000389759 IQCEQ6IPM2 695 aa10.12□□□□□ -0.79
PKP4-202ENST00000389759 SPG7Q9UQ90 795 aa10.12□□□□□ -0.79
PKP4-202ENST00000389759 LRRFIP2Q9Y608 721 aaKnown RBP10.12□□□□□ -0.79
PKP4-202ENST00000389759 PTPRCP08575 1304 aa10.12□□□□□ -0.79
PKP4-202ENST00000389759 RBM25P49756 843 aaKnown RBP10.12□□□□□ -0.79
PKP4-202ENST00000389759 STIM1Q13586 685 aa10.12□□□□□ -0.79
PKP4-202ENST00000389759 STX1AQ16623 288 aa10.12□□□□□ -0.79
PKP4-202ENST00000389759 TMX4Q9H1E5 349 aaPredicted RBP10.12□□□□□ -0.79
PKP4-202ENST00000389759 LUC7LQ9NQ29 371 aaKnown RBP10.12□□□□□ -0.79
PKP4-202ENST00000389759 CCDC171Q6TFL3 1326 aa10.11□□□□□ -0.79
PKP4-202ENST00000389759 KIF5CO60282 957 aa10.11□□□□□ -0.79
PKP4-202ENST00000389759 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
PKP4-202ENST00000389759 ANAPC15P60006 121 aa10.11□□□□□ -0.79
PKP4-202ENST00000389759 SMAP1Q8IYB5 467 aaPredicted RBP10.11□□□□□ -0.79
PKP4-202ENST00000389759 FSIP1Q8NA03 581 aa10.11□□□□□ -0.79
PKP4-202ENST00000389759 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■■■□□ 14.6
PKP4-202ENST00000389759 CASQ1P31415 396 aa10.11□□□□□ -0.79
PKP4-202ENST00000389759 ZNF530Q6P9A1 599 aaPredicted RBP10.11□□□□□ -0.79
PKP4-202ENST00000389759 CCDC61Q9Y6R9 512 aa10.11□□□□□ -0.79
PKP4-202ENST00000389759 PER1O15534 1290 aaPredicted RBP10.1□□□□□ -0.79
PKP4-202ENST00000389759 TSHZ3Q63HK5 1081 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 TMC6Q7Z403 805 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 BOLA2Q9H3K6 86 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 ADGRF5Q8IZF2 1346 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 TTC39AQ5SRH9 613 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 CNPY2Q9Y2B0 182 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 U3KPZ7 1027 aaPredicted RBP10.1□□□□□ -0.79
PKP4-202ENST00000389759 ABCA10Q8WWZ4 1543 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 G3V3G9 751 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 FYB1O15117 783 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 TERF1P54274 439 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 MAP9Q49MG5 647 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 CT47A1Q5JQC4 288 aaPredicted RBP10.1□□□□□ -0.79
PKP4-202ENST00000389759 DCAF8Q5TAQ9 597 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 CCDC148Q8NFR7 591 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 TRIM34Q9BYJ4 488 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■■□□□ 11.4
PKP4-202ENST00000389759 NSD2O96028 1365 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 SKILP12757 684 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 ZGPATQ8N5A5 531 aaKnown RBP10.1□□□□□ -0.79
PKP4-202ENST00000389759 CENPHQ9H3R5 247 aa10.1□□□□□ -0.79
PKP4-202ENST00000389759 SLC3A2P08195 630 aaKnown RBP10.09□□□□□ -0.79
PKP4-202ENST00000389759 FKBP4Q02790 459 aaKnown RBP eCLIP10.09□□□□□ -0.79
PKP4-202ENST00000389759 RBSNQ9H1K0 784 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 RAD21O60216 631 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 PDE1AP54750 535 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 GUCY1B3Q02153 619 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 TXLNBQ8N3L3 684 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 ANKRD44Q8N8A2 993 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 ZBTB40Q9NUA8 1239 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 SHTN1A0MZ66 631 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 CCDC69A6NI79 296 aa10.09□□□□□ -0.79
PKP4-202ENST00000389759 BBXQ8WY36 941 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms