RNA–Protein interactions for RNA: ENST00000389704.3

EXOSC8-202, Transcript of exosome component 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC8, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-202ENST00000389704 ITPK1Q13572 414 aa22.74■■□□□ 1.23
EXOSC8-202ENST00000389704 C5P01031 1676 aa22.74■■□□□ 1.23
EXOSC8-202ENST00000389704 KDRP35968 1356 aa22.74■■□□□ 1.23
EXOSC8-202ENST00000389704 ITGB4P16144 1822 aa22.73■■□□□ 1.23
EXOSC8-202ENST00000389704 GNPATO15228 680 aa22.73■■□□□ 1.23
EXOSC8-202ENST00000389704 CC2D1BQ5T0F9 858 aaKnown RBP22.73■■□□□ 1.23
EXOSC8-202ENST00000389704 RBM42Q9BTD8 480 aaKnown RBP22.73■■□□□ 1.23
EXOSC8-202ENST00000389704 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
EXOSC8-202ENST00000389704 NLGN2Q8NFZ4 835 aa22.72■■□□□ 1.23
EXOSC8-202ENST00000389704 CD2APQ9Y5K6 639 aa22.72■■□□□ 1.23
EXOSC8-202ENST00000389704 COL24A1Q17RW2 1714 aa22.71■■□□□ 1.23
EXOSC8-202ENST00000389704 AMIGO3Q86WK7 504 aa22.71■■□□□ 1.23
EXOSC8-202ENST00000389704 C4BP0C0L5 1744 aa22.71■■□□□ 1.23
EXOSC8-202ENST00000389704 NPC1L1Q9UHC9 1359 aa22.69■■□□□ 1.22
EXOSC8-202ENST00000389704 DIAPH1O60610 1272 aaKnown RBP22.69■■□□□ 1.22
EXOSC8-202ENST00000389704 AKAP4Q5JQC9 854 aa22.69■■□□□ 1.22
EXOSC8-202ENST00000389704 RC3H1Q5TC82 1133 aaKnown RBP22.69■■□□□ 1.22
EXOSC8-202ENST00000389704 NFATC2IPQ8NCF5 419 aa22.69■■□□□ 1.22
EXOSC8-202ENST00000389704 RTCBQ9Y3I0 505 aaKnown RBP22.69■■□□□ 1.22
EXOSC8-202ENST00000389704 KDM6AO15550 1401 aaPredicted RBP22.68■■□□□ 1.22
EXOSC8-202ENST00000389704 GRIN3BO60391 1043 aa22.68■■□□□ 1.22
EXOSC8-202ENST00000389704 TRAPPC3LQ5T215 181 aa22.68■■□□□ 1.22
EXOSC8-202ENST00000389704 SMIM5Q71RC9 77 aa22.67■■□□□ 1.22
EXOSC8-202ENST00000389704 TAF1LQ8IZX4 1826 aa22.66■■□□□ 1.22
EXOSC8-202ENST00000389704 ZNF784Q8NCA9 323 aaPredicted RBP22.66■■□□□ 1.22
EXOSC8-202ENST00000389704 SLC4A9Q96Q91 983 aa22.66■■□□□ 1.22
EXOSC8-202ENST00000389704 HMOX1P09601 288 aa22.65■■□□□ 1.22
EXOSC8-202ENST00000389704 ADRA2BP18089 450 aa22.65■■□□□ 1.22
EXOSC8-202ENST00000389704 PTCD1O75127 700 aaKnown RBP22.64■■□□□ 1.21
EXOSC8-202ENST00000389704 CNTNAP4Q9C0A0 1308 aa22.63■■□□□ 1.21
EXOSC8-202ENST00000389704 RPS6KA4O75676 772 aa22.63■■□□□ 1.21
EXOSC8-202ENST00000389704 NLGN1Q8N2Q7 840 aa22.63■■□□□ 1.21
EXOSC8-202ENST00000389704 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
EXOSC8-202ENST00000389704 GOLGB1Q14789 3259 aaKnown RBP22.62■■□□□ 1.21
EXOSC8-202ENST00000389704 RFC4P35249 363 aa22.61■■□□□ 1.21
EXOSC8-202ENST00000389704 SLC52A2Q9HAB3 445 aa22.61■■□□□ 1.21
EXOSC8-202ENST00000389704 YBX3P16989 372 aaKnown RBP eCLIP22.6■■□□□ 1.215e-8■■■□□ 15.9
EXOSC8-202ENST00000389704 ARHGEF1Q92888 912 aaKnown RBP22.6■■□□□ 1.21
EXOSC8-202ENST00000389704 RNMTO43148 476 aaKnown RBP22.59■■□□□ 1.21
EXOSC8-202ENST00000389704 MMP10P09238 476 aa22.59■■□□□ 1.21
EXOSC8-202ENST00000389704 MTHFSDQ2M296 383 aaKnown RBP22.59■■□□□ 1.21
EXOSC8-202ENST00000389704 LGR6Q9HBX8 967 aa22.59■■□□□ 1.21
EXOSC8-202ENST00000389704 UBR3Q6ZT12 1888 aa22.59■■□□□ 1.21
EXOSC8-202ENST00000389704 U2SURPO15042 1029 aaKnown RBP22.58■■□□□ 1.21
EXOSC8-202ENST00000389704 CRKLP46109 303 aaKnown RBP22.57■■□□□ 1.2
EXOSC8-202ENST00000389704 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
EXOSC8-202ENST00000389704 ZNF831Q5JPB2 1677 aa22.55■■□□□ 1.2
EXOSC8-202ENST00000389704 GYS1P13807 737 aa22.54■■□□□ 1.2
EXOSC8-202ENST00000389704 GAS2L2Q8NHY3 880 aa22.53■■□□□ 1.2
EXOSC8-202ENST00000389704 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
EXOSC8-202ENST00000389704 PARP3Q9Y6F1 533 aa22.52■■□□□ 1.2
EXOSC8-202ENST00000389704 CHD4Q14839 1912 aa22.52■■□□□ 1.2
EXOSC8-202ENST00000389704 TGFB2P61812 414 aa22.51■■□□□ 1.19
EXOSC8-202ENST00000389704 SLC39A6Q13433 755 aa22.51■■□□□ 1.19
EXOSC8-202ENST00000389704 CCDC87Q9NVE4 849 aa22.51■■□□□ 1.19
EXOSC8-202ENST00000389704 GNAT3A8MTJ3 354 aa22.5■■□□□ 1.19
EXOSC8-202ENST00000389704 INTS5Q6P9B9 1019 aaKnown RBP22.5■■□□□ 1.19
EXOSC8-202ENST00000389704 DNAJC10Q8IXB1 793 aa22.5■■□□□ 1.19
EXOSC8-202ENST00000389704 VSIG10Q8N0Z9 540 aa22.5■■□□□ 1.19
EXOSC8-202ENST00000389704 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
EXOSC8-202ENST00000389704 COL3A1P02461 1466 aaPredicted RBP22.48■■□□□ 1.19
EXOSC8-202ENST00000389704 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
EXOSC8-202ENST00000389704 TEFQ10587 303 aa22.48■■□□□ 1.19
EXOSC8-202ENST00000389704 ZPR1O75312 459 aa22.47■■□□□ 1.19
EXOSC8-202ENST00000389704 USP42Q9H9J4 1324 aaKnown RBP22.47■■□□□ 1.19
EXOSC8-202ENST00000389704 MRC1P22897 1456 aa22.47■■□□□ 1.19
EXOSC8-202ENST00000389704 SCN11AQ9UI33 1791 aa22.45■■□□□ 1.19
EXOSC8-202ENST00000389704 PPP2R1AP30153 589 aa22.45■■□□□ 1.18
EXOSC8-202ENST00000389704 IL17REQ8NFR9 667 aa22.45■■□□□ 1.18
EXOSC8-202ENST00000389704 SRP68Q9UHB9 627 aaKnown RBP22.45■■□□□ 1.18
EXOSC8-202ENST00000389704 WWC3Q9ULE0 1092 aa22.45■■□□□ 1.18
EXOSC8-202ENST00000389704 COL5A3P25940 1745 aaPredicted RBP22.45■■□□□ 1.18
EXOSC8-202ENST00000389704 STARD3NLO95772 234 aa22.44■■□□□ 1.18
EXOSC8-202ENST00000389704 PRKAR2BP31323 418 aa22.44■■□□□ 1.18
EXOSC8-202ENST00000389704 FKBP8Q14318 412 aa22.44■■□□□ 1.18
EXOSC8-202ENST00000389704 SOS1Q07889 1333 aaPredicted RBP22.43■■□□□ 1.18
EXOSC8-202ENST00000389704 A0A0G2JLW4 131 aa22.43■■□□□ 1.18
EXOSC8-202ENST00000389704 GIGYF1O75420 1035 aaPredicted RBP22.43■■□□□ 1.18
EXOSC8-202ENST00000389704 U2AF1L5P0DN76 240 aaPredicted RBP22.43■■□□□ 1.18
EXOSC8-202ENST00000389704 U2AF1Q01081 240 aaKnown RBP eCLIP22.43■■□□□ 1.18
EXOSC8-202ENST00000389704 TEX13AQ9BXU3 409 aaPredicted RBP22.43■■□□□ 1.18
EXOSC8-202ENST00000389704 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
EXOSC8-202ENST00000389704 FCHSD2O94868 740 aa22.42■■□□□ 1.18
EXOSC8-202ENST00000389704 C1QTNF8P60827 252 aa22.42■■□□□ 1.18
EXOSC8-202ENST00000389704 ZNF790Q6PG37 636 aa22.42■■□□□ 1.18
EXOSC8-202ENST00000389704 C10orf71Q711Q0 1435 aa22.41■■□□□ 1.18
EXOSC8-202ENST00000389704 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
EXOSC8-202ENST00000389704 PHACTR3Q96KR7 559 aa22.41■■□□□ 1.18
EXOSC8-202ENST00000389704 NARFQ9UHQ1 456 aa22.41■■□□□ 1.18
EXOSC8-202ENST00000389704 CICQ96RK0 1608 aaPredicted RBP22.41■■□□□ 1.18
EXOSC8-202ENST00000389704 MYH14Q7Z406 1995 aaKnown RBP22.41■■□□□ 1.18
EXOSC8-202ENST00000389704 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
EXOSC8-202ENST00000389704 DPEP1P16444 411 aa22.4■■□□□ 1.18
EXOSC8-202ENST00000389704 TM4SF1P30408 202 aa22.4■■□□□ 1.18
EXOSC8-202ENST00000389704 BCS1LQ9Y276 419 aa22.4■■□□□ 1.18
EXOSC8-202ENST00000389704 ZBTB1Q9Y2K1 713 aa22.4■■□□□ 1.18
EXOSC8-202ENST00000389704 KCPQ6ZWJ8 1503 aa22.38■■□□□ 1.17
EXOSC8-202ENST00000389704 A0A087WZG4 1122 aa22.38■■□□□ 1.17
EXOSC8-202ENST00000389704 CANXP27824 592 aaKnown RBP22.38■■□□□ 1.17
EXOSC8-202ENST00000389704 DDR1Q08345 913 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms