RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 RECKO95980 971 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 EPHA4P54764 986 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 PTPN5P54829 565 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 WNT7BP56706 349 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 DHX9Q08211 1270 aaKnown RBP4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 ALKBH2Q6NS38 261 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 C16orf46Q6P387 395 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 TMC7Q7Z402 723 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 SLC4A9Q96Q91 983 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 BRPF3Q9ULD4 1205 aa4.79□□□□□ -1.64
RNU6-140P-201ENST00000384566 POTEMA6NI47 508 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 TREHO43280 583 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 GNRH1P01148 92 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 MPSTP25325 297 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 ITGAEP38570 1179 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 ZC3H6P61129 1189 aaKnown RBP4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 TRIM32Q13049 653 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 TSNAXIP1Q2TAA8 658 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 ESCO1Q5FWF5 840 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 STAG2Q8N3U4 1231 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 CHMP7Q8WUX9 453 aaPredicted RBP4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 DRC1Q96MC2 740 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 CDK15Q96Q40 435 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 TSPAN10Q9H1Z9 355 aaPredicted RBP4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 SERTAD1Q9UHV2 236 aa4.78□□□□□ -1.64
RNU6-140P-201ENST00000384566 A0A1W2PRU2 124 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 PPP1R12BO60237 982 aaPredicted RBP4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 P4HBP07237 508 aaKnown RBP4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 SKOR1P84550 965 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 PLCB3Q01970 1234 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 MRPL58Q14197 206 aaKnown RBP4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 ARID5BQ14865 1188 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 CYP2U1Q7Z449 544 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 MPNDQ8N594 471 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 TMC1Q8TDI8 760 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 DMRTB1Q96MA1 342 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 BACH2Q9BYV9 841 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 SAP130Q9H0E3 1048 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 ETNK1Q9HBU6 452 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 CYLDQ9NQC7 956 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 STIM2Q9P246 746 aa4.77□□□□□ -1.65
RNU6-140P-201ENST00000384566 A6NJY4 79 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 SCAMP3O14828 347 aaKnown RBP4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 PPEF1O14829 653 aaPredicted RBP4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 EIF1AXP47813 144 aaKnown RBP4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 FOXK2Q01167 660 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 MYT1Q01538 1121 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 XPCQ01831 940 aaPredicted RBP4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 FMR1Q06787 632 aaKnown RBP eCLIP4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 PDE3BQ13370 1112 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 AAMPQ13685 434 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 DSC3Q14574 896 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 SLC9A9Q8IVB4 645 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 ANKLE1Q8NAG6 615 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 EHBP1Q8NDI1 1231 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 SREK1Q8WXA9 508 aaKnown RBP4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 C2orf49Q9BVC5 232 aaPredicted RBP4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 PRKD2Q9BZL6 878 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 TMPRSS4Q9NRS4 437 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 SCHIP1Q9P0W5 487 aaPredicted RBP4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 CHMP3Q9Y3E7 222 aa4.76□□□□□ -1.65
RNU6-140P-201ENST00000384566 RNF223E7ERA6 249 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 FZD6O60353 706 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 LILRA1O75019 489 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 STAU1O95793 577 aaKnown RBP4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 FSHRP23945 695 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 GGCXP38435 758 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 GRM5P41594 1212 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 RPIAP49247 311 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 SMTNP53814 917 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 PSMA6P60900 246 aaKnown RBP4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 MTFR1Q15390 333 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 COX20Q5RI15 118 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 ABTB2Q8N961 1025 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 ZNF784Q8NCA9 323 aaPredicted RBP4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 MYO19Q96H55 970 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 KRTAP3-3Q9BYR6 98 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
RNU6-140P-201ENST00000384566 PRPF40AO75400 957 aaKnown RBP4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 CD2BP2O95400 341 aaKnown RBP4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 LDHBP07195 334 aaKnown RBP4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 BRD2P25440 801 aaKnown RBP4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 ERCC5P28715 1186 aaPredicted RBP4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 MAPK8P45983 427 aa4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 EHHADHQ08426 723 aa4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 NR5A1Q13285 461 aa4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 SF3A1Q15459 793 aaKnown RBP4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 NAALADL2Q58DX5 795 aa4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 RC3H1Q5TC82 1133 aaKnown RBP4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 CCDC116Q8IYX3 515 aa4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 ALKBH8Q96BT7 664 aaKnown RBP4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 XAGE2Q96GT9 111 aa4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 FAM129BQ96TA1 746 aa4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 CCDC87Q9NVE4 849 aa4.74□□□□□ -1.65
RNU6-140P-201ENST00000384566 CDK2AP1O14519 115 aa4.73□□□□□ -1.65
RNU6-140P-201ENST00000384566 TNFRSF10BO14763 440 aa4.73□□□□□ -1.65
RNU6-140P-201ENST00000384566 HMGB1P09429 215 aaKnown RBP4.73□□□□□ -1.65
RNU6-140P-201ENST00000384566 ATP2B2Q01814 1243 aa4.73□□□□□ -1.65
RNU6-140P-201ENST00000384566 KCNC4Q03721 635 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms