RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 BTG4Q9NY30 223 aa25.86■■□□□ 1.73
CPNE9-202ENST00000383831 ABCC4O15439 1325 aa25.86■■□□□ 1.73
CPNE9-202ENST00000383831 CYP27B1O15528 508 aa25.85■■□□□ 1.73
CPNE9-202ENST00000383831 KCNQ3O43525 872 aa25.84■■□□□ 1.73
CPNE9-202ENST00000383831 EIF4A1P60842 406 aaKnown RBP25.84■■□□□ 1.73
CPNE9-202ENST00000383831 TSHZ2Q9NRE2 1034 aa25.84■■□□□ 1.73
CPNE9-202ENST00000383831 UBAP1LF5GYI3 381 aa25.84■■□□□ 1.73
CPNE9-202ENST00000383831 SLC4A2P04920 1241 aa25.83■■□□□ 1.73
CPNE9-202ENST00000383831 PCDHB15Q9Y5E8 787 aa25.83■■□□□ 1.73
CPNE9-202ENST00000383831 RGS12O14924 1447 aa25.82■■□□□ 1.72
CPNE9-202ENST00000383831 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
CPNE9-202ENST00000383831 IGHDP01880 384 aa25.82■■□□□ 1.72
CPNE9-202ENST00000383831 IL2RBP14784 551 aa25.82■■□□□ 1.72
CPNE9-202ENST00000383831 PTPRCP08575 1304 aa25.81■■□□□ 1.72
CPNE9-202ENST00000383831 CCDC30Q5VVM6 783 aa25.81■■□□□ 1.72
CPNE9-202ENST00000383831 ZCRB1Q8TBF4 217 aaKnown RBP25.8■■□□□ 1.72
CPNE9-202ENST00000383831 DCAF5Q96JK2 942 aa25.8■■□□□ 1.72
CPNE9-202ENST00000383831 SLC52A2Q9HAB3 445 aa25.8■■□□□ 1.72
CPNE9-202ENST00000383831 MRC1P22897 1456 aa25.8■■□□□ 1.72
CPNE9-202ENST00000383831 STK31Q9BXU1 1019 aa25.79■■□□□ 1.72
CPNE9-202ENST00000383831 PCDH11XQ9BZA7 1347 aa25.79■■□□□ 1.72
CPNE9-202ENST00000383831 PCDH11YQ9BZA8 1340 aa25.79■■□□□ 1.72
CPNE9-202ENST00000383831 HSP90AB1P08238 724 aaKnown RBP25.79■■□□□ 1.72
CPNE9-202ENST00000383831 NECTIN2Q92692 538 aa25.79■■□□□ 1.72
CPNE9-202ENST00000383831 SHANK3Q9BYB0 1731 aa25.79■■□□□ 1.72
CPNE9-202ENST00000383831 G2E3Q7L622 706 aa25.78■■□□□ 1.72
CPNE9-202ENST00000383831 ZBTB40Q9NUA8 1239 aa25.78■■□□□ 1.72
CPNE9-202ENST00000383831 PLCH1Q4KWH8 1693 aa25.77■■□□□ 1.72
CPNE9-202ENST00000383831 HOXB7P09629 217 aa25.77■■□□□ 1.72
CPNE9-202ENST00000383831 HDGFL1Q5TGJ6 251 aa25.77■■□□□ 1.72
CPNE9-202ENST00000383831 USP35Q9P2H5 1018 aa25.77■■□□□ 1.72
CPNE9-202ENST00000383831 CACNA1FO60840 1977 aa25.76■■□□□ 1.71
CPNE9-202ENST00000383831 HEG1Q9ULI3 1381 aa25.76■■□□□ 1.71
CPNE9-202ENST00000383831 ZBTB7BO15156 539 aaPredicted RBP25.75■■□□□ 1.71
CPNE9-202ENST00000383831 ADAMTS2O95450 1211 aa25.75■■□□□ 1.71
CPNE9-202ENST00000383831 SKAP1Q86WV1 359 aa25.74■■□□□ 1.71
CPNE9-202ENST00000383831 NFATC2IPQ8NCF5 419 aa25.74■■□□□ 1.71
CPNE9-202ENST00000383831 INTS3Q68E01 1043 aaKnown RBP25.73■■□□□ 1.71
CPNE9-202ENST00000383831 EIF2S2P20042 333 aaKnown RBP25.72■■□□□ 1.71
CPNE9-202ENST00000383831 NRAPQ86VF7 1730 aa25.72■■□□□ 1.71
CPNE9-202ENST00000383831 NUTM2BA6NNL0 878 aaPredicted RBP25.72■■□□□ 1.71
CPNE9-202ENST00000383831 NUTM2EB1AL46 878 aaPredicted RBP25.72■■□□□ 1.71
CPNE9-202ENST00000383831 FLIIQ13045 1269 aa25.72■■□□□ 1.71
CPNE9-202ENST00000383831 SLC39A6Q13433 755 aa25.72■■□□□ 1.71
CPNE9-202ENST00000383831 NUTM2AQ8IVF1 878 aaPredicted RBP25.72■■□□□ 1.71
CPNE9-202ENST00000383831 CHMP4BQ9H444 224 aaKnown RBP25.72■■□□□ 1.71
CPNE9-202ENST00000383831 GIGYF1O75420 1035 aaPredicted RBP25.71■■□□□ 1.71
CPNE9-202ENST00000383831 ZNF790Q6PG37 636 aa25.71■■□□□ 1.71
CPNE9-202ENST00000383831 RWDD1Q9H446 243 aaPredicted RBP25.71■■□□□ 1.71
CPNE9-202ENST00000383831 DISP2A7MBM2 1401 aa25.71■■□□□ 1.71
CPNE9-202ENST00000383831 CABP4P57796 275 aa25.69■■□□□ 1.7
CPNE9-202ENST00000383831 NKX1-1Q15270 411 aaPredicted RBP25.69■■□□□ 1.7
CPNE9-202ENST00000383831 CHMP4AQ9BY43 222 aa25.69■■□□□ 1.7
CPNE9-202ENST00000383831 DDX54Q8TDD1 881 aaKnown RBP25.69■■□□□ 1.7
CPNE9-202ENST00000383831 F6X3S4 739 aa25.68■■□□□ 1.7
CPNE9-202ENST00000383831 CERKQ8TCT0 537 aa25.68■■□□□ 1.7
CPNE9-202ENST00000383831 WNK3Q9BYP7 1800 aa25.67■■□□□ 1.7
CPNE9-202ENST00000383831 CHPF2Q9P2E5 772 aa25.67■■□□□ 1.7
CPNE9-202ENST00000383831 PRAMEF22A3QJZ6 481 aa25.67■■□□□ 1.7
CPNE9-202ENST00000383831 FKBP5Q13451 457 aaPredicted RBP25.67■■□□□ 1.7
CPNE9-202ENST00000383831 HDAC1Q13547 482 aaPredicted RBP25.67■■□□□ 1.7
CPNE9-202ENST00000383831 C5P01031 1676 aa25.66■■□□□ 1.7
CPNE9-202ENST00000383831 PHAXQ9H814 394 aaKnown RBP25.66■■□□□ 1.7
CPNE9-202ENST00000383831 ERVV-2B6SEH9 535 aa25.64■■□□□ 1.7
CPNE9-202ENST00000383831 C1orf115Q9H7X2 142 aa25.64■■□□□ 1.7
CPNE9-202ENST00000383831 NWD2Q9ULI1 1742 aa25.64■■□□□ 1.69
CPNE9-202ENST00000383831 JCADQ9P266 1359 aa25.64■■□□□ 1.69
CPNE9-202ENST00000383831 SLC4A10Q6U841 1118 aa25.64■■□□□ 1.69
CPNE9-202ENST00000383831 TOGARAM1Q9Y4F4 1720 aa25.63■■□□□ 1.69
CPNE9-202ENST00000383831 TTC5Q8N0Z6 440 aa25.63■■□□□ 1.69
CPNE9-202ENST00000383831 ZNF496Q96IT1 587 aaPredicted RBP25.63■■□□□ 1.69
CPNE9-202ENST00000383831 SLIT2O94813 1529 aa25.63■■□□□ 1.69
CPNE9-202ENST00000383831 CCT4P50991 539 aaKnown RBP25.62■■□□□ 1.69
CPNE9-202ENST00000383831 DBF4Q9UBU7 674 aaPredicted RBP25.61■■□□□ 1.69
CPNE9-202ENST00000383831 N4BP2Q86UW6 1770 aaPredicted RBP25.61■■□□□ 1.69
CPNE9-202ENST00000383831 ANXA1P04083 346 aa25.61■■□□□ 1.69
CPNE9-202ENST00000383831 PXDNLA1KZ92 1463 aa25.61■■□□□ 1.69
CPNE9-202ENST00000383831 GLI3P10071 1580 aa25.6■■□□□ 1.69
CPNE9-202ENST00000383831 SPATA31A1Q5TZJ5 1347 aa25.6■■□□□ 1.69
CPNE9-202ENST00000383831 PAPPAQ13219 1627 aa25.6■■□□□ 1.69
CPNE9-202ENST00000383831 FMNL2Q96PY5 1086 aa25.59■■□□□ 1.69
CPNE9-202ENST00000383831 PROSER3Q2NL68 480 aa25.58■■□□□ 1.69
CPNE9-202ENST00000383831 MEIS3Q99687 375 aa25.58■■□□□ 1.69
CPNE9-202ENST00000383831 UBR2Q8IWV8 1755 aa25.58■■□□□ 1.68
CPNE9-202ENST00000383831 RGS3P49796 1198 aa25.57■■□□□ 1.68
CPNE9-202ENST00000383831 SNRPA1P09661 255 aaKnown RBP25.56■■□□□ 1.68
CPNE9-202ENST00000383831 PDZRN3Q9UPQ7 1066 aa25.56■■□□□ 1.68
CPNE9-202ENST00000383831 TNS2Q63HR2 1409 aa25.56■■□□□ 1.68
CPNE9-202ENST00000383831 SIRT2Q8IXJ6 389 aa25.56■■□□□ 1.68
CPNE9-202ENST00000383831 THRAP3Q9Y2W1 955 aaKnown RBP25.56■■□□□ 1.68
CPNE9-202ENST00000383831 SPATA31A5Q5VU36 1347 aa25.55■■□□□ 1.68
CPNE9-202ENST00000383831 SPATA31A7Q8IWB4 1347 aa25.55■■□□□ 1.68
CPNE9-202ENST00000383831 EXOC5O00471 708 aa25.55■■□□□ 1.68
CPNE9-202ENST00000383831 SMC5Q8IY18 1101 aa25.55■■□□□ 1.68
CPNE9-202ENST00000383831 RBM19Q9Y4C8 960 aaKnown RBP25.55■■□□□ 1.68
CPNE9-202ENST00000383831 PDIA6Q15084 440 aa25.54■■□□□ 1.68
CPNE9-202ENST00000383831 CDCA7Q9BWT1 371 aaPredicted RBP25.54■■□□□ 1.68
CPNE9-202ENST00000383831 DDX21Q9NR30 783 aaKnown RBP eCLIP25.54■■□□□ 1.68
CPNE9-202ENST00000383831 HYPKQ9NX55 129 aa25.54■■□□□ 1.68
CPNE9-202ENST00000383831 KCPQ6ZWJ8 1503 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms