RNA–Protein interactions for RNA: ENST00000381736.7

NUP58-202, Transcript of nucleoporin 58, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP58, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-202ENST00000381736 ZNF521Q96K83 1311 aa13.9□□□□□ -0.18
NUP58-202ENST00000381736 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
NUP58-202ENST00000381736 TNNQ9UQP3 1299 aa13.9□□□□□ -0.18
NUP58-202ENST00000381736 FAM177BA6PVY3 158 aa13.9□□□□□ -0.18
NUP58-202ENST00000381736 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
NUP58-202ENST00000381736 HSP90AB4PQ58FF6 505 aa13.9□□□□□ -0.18
NUP58-202ENST00000381736 ARHGAP45Q92619 1136 aa13.9□□□□□ -0.18
NUP58-202ENST00000381736 CHPF2Q9P2E5 772 aa13.9□□□□□ -0.18
NUP58-202ENST00000381736 LARP1Q6PKG0 1096 aaKnown RBP13.89□□□□□ -0.19
NUP58-202ENST00000381736 IL17REQ8NFR9 667 aa13.89□□□□□ -0.19
NUP58-202ENST00000381736 DNAAF4Q8WXU2 420 aa13.89□□□□□ -0.19
NUP58-202ENST00000381736 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
NUP58-202ENST00000381736 PI4KAP2A4QPH2 592 aa13.89□□□□□ -0.19
NUP58-202ENST00000381736 PI4KAP1Q8N8J0 262 aa13.89□□□□□ -0.19
NUP58-202ENST00000381736 RILPL2Q969X0 211 aa13.89□□□□□ -0.19
NUP58-202ENST00000381736 GCC1Q96CN9 775 aa13.89□□□□□ -0.19
NUP58-202ENST00000381736 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
NUP58-202ENST00000381736 KIAA1211Q6ZU35 1233 aa13.88□□□□□ -0.19
NUP58-202ENST00000381736 ACSBG1Q96GR2 724 aa13.88□□□□□ -0.19
NUP58-202ENST00000381736 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
NUP58-202ENST00000381736 RLBP1P12271 317 aa13.88□□□□□ -0.19
NUP58-202ENST00000381736 OVOS2A0A0J9YW53 1432 aa13.87□□□□□ -0.19
NUP58-202ENST00000381736 OVOS2Q6IE36 1432 aa13.87□□□□□ -0.19
NUP58-202ENST00000381736 RPAP2Q8IXW5 612 aaPredicted RBP13.87□□□□□ -0.19
NUP58-202ENST00000381736 TNS3Q68CZ2 1445 aa13.87□□□□□ -0.19
NUP58-202ENST00000381736 CD163L1Q9NR16 1453 aa13.87□□□□□ -0.19
NUP58-202ENST00000381736 SRGAP3O43295 1099 aa13.86□□□□□ -0.19
NUP58-202ENST00000381736 MCCP23508 829 aa13.86□□□□□ -0.19
NUP58-202ENST00000381736 BABAM1Q9NWV8 329 aa13.86□□□□□ -0.19
NUP58-202ENST00000381736 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
NUP58-202ENST00000381736 TRMT2AQ8IZ69 625 aaKnown RBP13.86□□□□□ -0.19
NUP58-202ENST00000381736 MYD88Q99836 296 aa13.86□□□□□ -0.19
NUP58-202ENST00000381736 MAP3K2Q9Y2U5 619 aa13.85□□□□□ -0.19
NUP58-202ENST00000381736 TEX13AQ9BXU3 409 aaPredicted RBP13.85□□□□□ -0.19
NUP58-202ENST00000381736 WDR17Q8IZU2 1322 aa13.85□□□□□ -0.19
NUP58-202ENST00000381736 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
NUP58-202ENST00000381736 SLC52A2Q9HAB3 445 aa13.85□□□□□ -0.19
NUP58-202ENST00000381736 PHKG2P15735 406 aa13.84□□□□□ -0.19
NUP58-202ENST00000381736 CLASRPQ8N2M8 674 aaKnown RBP13.84□□□□□ -0.19
NUP58-202ENST00000381736 CARD10Q9BWT7 1032 aa13.84□□□□□ -0.19
NUP58-202ENST00000381736 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
NUP58-202ENST00000381736 CDCA7Q9BWT1 371 aaPredicted RBP13.83□□□□□ -0.19
NUP58-202ENST00000381736 SKAP1Q86WV1 359 aa13.83□□□□□ -0.2
NUP58-202ENST00000381736 COPS6Q7L5N1 327 aa13.83□□□□□ -0.2
NUP58-202ENST00000381736 XAGE3Q8WTP9 111 aa13.83□□□□□ -0.2
NUP58-202ENST00000381736 NCOA3Q9Y6Q9 1424 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 FAM98CQ17RN3 349 aaKnown RBP13.82□□□□□ -0.2
NUP58-202ENST00000381736 SIL1Q9H173 461 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 ANKRD13DQ6ZTN6 518 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 G2E3Q7L622 706 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 CHD1LQ86WJ1 897 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.21e-6■■□□□ 14
NUP58-202ENST00000381736 EXOC6BQ9Y2D4 811 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 LRRFIP2Q9Y608 721 aaKnown RBP13.82□□□□□ -0.2
NUP58-202ENST00000381736 ITSN1Q15811 1721 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 MEIS3Q99687 375 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 PCDHB15Q9Y5E8 787 aa13.82□□□□□ -0.2
NUP58-202ENST00000381736 RNF123Q5XPI4 1314 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 FGD1P98174 961 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 NEUROD6Q96NK8 337 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 TMX4Q9H1E5 349 aaPredicted RBP13.81□□□□□ -0.2
NUP58-202ENST00000381736 PHAXQ9H814 394 aaKnown RBP13.81□□□□□ -0.2
NUP58-202ENST00000381736 SOS1Q07889 1333 aaPredicted RBP13.81□□□□□ -0.2
NUP58-202ENST00000381736 HSCBQ8IWL3 235 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 KCNQ3O43525 872 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 EIF4A1P60842 406 aaKnown RBP13.81□□□□□ -0.2
NUP58-202ENST00000381736 USP21Q9UK80 565 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
NUP58-202ENST00000381736 IGHDP01880 384 aa13.81□□□□□ -0.2
NUP58-202ENST00000381736 DCCP43146 1447 aa13.8□□□□□ -0.2
NUP58-202ENST00000381736 ZNF496Q96IT1 587 aaPredicted RBP13.8□□□□□ -0.2
NUP58-202ENST00000381736 HOXB7P09629 217 aa13.8□□□□□ -0.2
NUP58-202ENST00000381736 ADAMTSL3P82987 1691 aa13.8□□□□□ -0.2
NUP58-202ENST00000381736 MST1RQ04912 1400 aa13.8□□□□□ -0.2
NUP58-202ENST00000381736 A0A087WZG4 1122 aa13.79□□□□□ -0.2
NUP58-202ENST00000381736 KSR2Q6VAB6 950 aa13.79□□□□□ -0.2
NUP58-202ENST00000381736 MYOM1P52179 1685 aa13.79□□□□□ -0.2
NUP58-202ENST00000381736 ERC2O15083 957 aa13.79□□□□□ -0.2
NUP58-202ENST00000381736 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
NUP58-202ENST00000381736 ERC1Q8IUD2 1116 aa13.79□□□□□ -0.2
NUP58-202ENST00000381736 DDX21Q9NR30 783 aaKnown RBP eCLIP13.79□□□□□ -0.2
NUP58-202ENST00000381736 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
NUP58-202ENST00000381736 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
NUP58-202ENST00000381736 IL1RAPL2Q9NP60 686 aa13.78□□□□□ -0.2
NUP58-202ENST00000381736 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
NUP58-202ENST00000381736 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
NUP58-202ENST00000381736 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
NUP58-202ENST00000381736 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
NUP58-202ENST00000381736 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
NUP58-202ENST00000381736 SPRYD3Q8NCJ5 442 aa13.78□□□□□ -0.2
NUP58-202ENST00000381736 GPTP24298 496 aa13.78□□□□□ -0.2
NUP58-202ENST00000381736 BICDL1Q6ZP65 573 aa13.78□□□□□ -0.2
NUP58-202ENST00000381736 TRIM44Q96DX7 344 aaPredicted RBP13.78□□□□□ -0.2
NUP58-202ENST00000381736 CCDC57Q2TAC2 916 aa13.77□□□□□ -0.2
NUP58-202ENST00000381736 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.21
NUP58-202ENST00000381736 UBE3BQ7Z3V4 1068 aa13.77□□□□□ -0.21
NUP58-202ENST00000381736 SMARCC1Q92922 1105 aaPredicted RBP13.77□□□□□ -0.21
NUP58-202ENST00000381736 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms