RNA–Protein interactions for RNA: ENST00000381124.9

H2AFV-205, Transcript of H2A histone family member V, humanhuman

TSL 3 BASIC

Gene H2AFV, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-205ENST00000381124 LINC00116Q8NCU8 138 aa36.21■■■■□ 3.39
H2AFV-205ENST00000381124 RBM42Q9BTD8 480 aaKnown RBP36.21■■■■□ 3.39
H2AFV-205ENST00000381124 FLAD1Q8NFF5 587 aa36.2■■■■□ 3.39
H2AFV-205ENST00000381124 TAF1LQ8IZX4 1826 aa36.2■■■■□ 3.38
H2AFV-205ENST00000381124 DCAF8L1A6NGE4 600 aa36.19■■■■□ 3.38
H2AFV-205ENST00000381124 ITPK1Q13572 414 aa36.19■■■■□ 3.38
H2AFV-205ENST00000381124 C4BP0C0L5 1744 aa36.19■■■■□ 3.38
H2AFV-205ENST00000381124 PPP2R1AP30153 589 aa36.18■■■■□ 3.38
H2AFV-205ENST00000381124 NFATC2IPQ8NCF5 419 aa36.18■■■■□ 3.38
H2AFV-205ENST00000381124 PHF14O94880 888 aa36.17■■■■□ 3.38
H2AFV-205ENST00000381124 MTHFSDQ2M296 383 aaKnown RBP36.17■■■■□ 3.38
H2AFV-205ENST00000381124 SYT17Q9BSW7 474 aa36.17■■■■□ 3.38
H2AFV-205ENST00000381124 ZEB1P37275 1124 aaPredicted RBP36.15■■■■□ 3.38
H2AFV-205ENST00000381124 KLHL34Q8N239 644 aa36.15■■■■□ 3.38
H2AFV-205ENST00000381124 MSL1Q68DK7 614 aa36.14■■■■□ 3.38
H2AFV-205ENST00000381124 DDX10Q13206 875 aaKnown RBP36.12■■■■□ 3.37
H2AFV-205ENST00000381124 SMIM5Q71RC9 77 aa36.12■■■■□ 3.37
H2AFV-205ENST00000381124 AMIGO3Q86WK7 504 aa36.12■■■■□ 3.37
H2AFV-205ENST00000381124 LGR6Q9HBX8 967 aa36.12■■■■□ 3.37
H2AFV-205ENST00000381124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.11■■■■□ 3.37
H2AFV-205ENST00000381124 GNPATO15228 680 aa36.11■■■■□ 3.37
H2AFV-205ENST00000381124 SLC4A9Q96Q91 983 aa36.11■■■■□ 3.37
H2AFV-205ENST00000381124 NUDCQ9Y266 331 aa36.11■■■■□ 3.37
H2AFV-205ENST00000381124 RNMTO43148 476 aaKnown RBP36.1■■■■□ 3.37
H2AFV-205ENST00000381124 PTCD1O75127 700 aaKnown RBP36.1■■■■□ 3.37
H2AFV-205ENST00000381124 SSFA2P28290 1259 aa36.08■■■■□ 3.37
H2AFV-205ENST00000381124 SLC52A2Q9HAB3 445 aa36.08■■■■□ 3.37
H2AFV-205ENST00000381124 SCN11AQ9UI33 1791 aa36.06■■■■□ 3.36
H2AFV-205ENST00000381124 GAS2L2Q8NHY3 880 aa36.05■■■■□ 3.36
H2AFV-205ENST00000381124 U2AF1L5P0DN76 240 aaPredicted RBP36.04■■■■□ 3.36
H2AFV-205ENST00000381124 U2AF1Q01081 240 aaKnown RBP eCLIP36.04■■■■□ 3.368e-7■□□□□ 8.6
H2AFV-205ENST00000381124 MAP3K5Q99683 1374 aa36.03■■■■□ 3.36
H2AFV-205ENST00000381124 PRKAR2BP31323 418 aa36.03■■■■□ 3.36
H2AFV-205ENST00000381124 UBR3Q6ZT12 1888 aa36.03■■■■□ 3.36
H2AFV-205ENST00000381124 COL24A1Q17RW2 1714 aa36.03■■■■□ 3.36
H2AFV-205ENST00000381124 RSPH6AQ9H0K4 717 aa36.01■■■■□ 3.36
H2AFV-205ENST00000381124 RTCBQ9Y3I0 505 aaKnown RBP36.01■■■■□ 3.36
H2AFV-205ENST00000381124 GNAT3A8MTJ3 354 aa35.98■■■■□ 3.35
H2AFV-205ENST00000381124 SLC39A6Q13433 755 aa35.98■■■■□ 3.35
H2AFV-205ENST00000381124 RC3H1Q5TC82 1133 aaKnown RBP35.98■■■■□ 3.35
H2AFV-205ENST00000381124 CNTNAP4Q9C0A0 1308 aa35.98■■■■□ 3.35
H2AFV-205ENST00000381124 MRC1P22897 1456 aa35.98■■■■□ 3.35
H2AFV-205ENST00000381124 TRAPPC3LQ5T215 181 aa35.97■■■■□ 3.35
H2AFV-205ENST00000381124 PHACTR3Q96KR7 559 aa35.97■■■■□ 3.35
H2AFV-205ENST00000381124 ZNF831Q5JPB2 1677 aa35.97■■■■□ 3.35
H2AFV-205ENST00000381124 RPS6KA4O75676 772 aa35.93■■■■□ 3.34
H2AFV-205ENST00000381124 TEFQ10587 303 aa35.93■■■■□ 3.34
H2AFV-205ENST00000381124 CRKLP46109 303 aaKnown RBP35.92■■■■□ 3.34
H2AFV-205ENST00000381124 IL17REQ8NFR9 667 aa35.92■■■■□ 3.34
H2AFV-205ENST00000381124 NLGN2Q8NFZ4 835 aa35.92■■■■□ 3.34
H2AFV-205ENST00000381124 FCHSD2O94868 740 aa35.91■■■■□ 3.34
H2AFV-205ENST00000381124 COL5A3P25940 1745 aaPredicted RBP35.91■■■■□ 3.34
H2AFV-205ENST00000381124 ADAMTS7Q9UKP4 1686 aa35.91■■■■□ 3.34
H2AFV-205ENST00000381124 ADRA2BP18089 450 aa35.9■■■■□ 3.34
H2AFV-205ENST00000381124 DNAJC10Q8IXB1 793 aa35.9■■■■□ 3.34
H2AFV-205ENST00000381124 ARHGEF1Q92888 912 aaKnown RBP35.9■■■■□ 3.34
H2AFV-205ENST00000381124 PELP1Q8IZL8 1130 aaKnown RBP35.89■■■■□ 3.34
H2AFV-205ENST00000381124 VIRMAQ69YN4 1812 aaKnown RBP35.88■■■■□ 3.33
H2AFV-205ENST00000381124 YY1P25490 414 aa35.88■■■■□ 3.33
H2AFV-205ENST00000381124 RFC4P35249 363 aa35.88■■■■□ 3.33
H2AFV-205ENST00000381124 GPR162Q16538 588 aa35.88■■■■□ 3.33
H2AFV-205ENST00000381124 TTC5Q8N0Z6 440 aa35.88■■■■□ 3.33
H2AFV-205ENST00000381124 TJP1Q07157 1748 aa35.86■■■■□ 3.33
H2AFV-205ENST00000381124 RALBP1Q15311 655 aa35.85■■■■□ 3.33
H2AFV-205ENST00000381124 CD2APQ9Y5K6 639 aa35.84■■■■□ 3.33
H2AFV-205ENST00000381124 KCPQ6ZWJ8 1503 aa35.83■■■■□ 3.33
H2AFV-205ENST00000381124 RTF1Q92541 710 aaKnown RBP35.83■■■■□ 3.33
H2AFV-205ENST00000381124 NEFMP07197 916 aa35.82■■■■□ 3.32
H2AFV-205ENST00000381124 INTS5Q6P9B9 1019 aaKnown RBP35.82■■■■□ 3.32
H2AFV-205ENST00000381124 NLGN1Q8N2Q7 840 aa35.82■■■■□ 3.32
H2AFV-205ENST00000381124 CCDC87Q9NVE4 849 aa35.82■■■■□ 3.32
H2AFV-205ENST00000381124 MYH14Q7Z406 1995 aaKnown RBP35.82■■■■□ 3.32
H2AFV-205ENST00000381124 MMP10P09238 476 aa35.81■■■■□ 3.32
H2AFV-205ENST00000381124 CYP19A1P11511 503 aaPredicted RBP35.8■■■■□ 3.32
H2AFV-205ENST00000381124 VSIG10Q8N0Z9 540 aa35.8■■■■□ 3.32
H2AFV-205ENST00000381124 CICQ96RK0 1608 aaPredicted RBP35.79■■■■□ 3.32
H2AFV-205ENST00000381124 CEMIPQ8WUJ3 1361 aa35.79■■■■□ 3.32
H2AFV-205ENST00000381124 ZNF790Q6PG37 636 aa35.79■■■■□ 3.32
H2AFV-205ENST00000381124 GYS1P13807 737 aa35.78■■■■□ 3.32
H2AFV-205ENST00000381124 MCM10Q7L590 875 aa35.77■■■■□ 3.32
H2AFV-205ENST00000381124 BTBD11A6QL63 1104 aa35.76■■■■□ 3.32
H2AFV-205ENST00000381124 ZNF496Q96IT1 587 aaPredicted RBP35.76■■■■□ 3.32
H2AFV-205ENST00000381124 SRP68Q9UHB9 627 aaKnown RBP35.76■■■■□ 3.32
H2AFV-205ENST00000381124 DCTN1Q14203 1278 aa35.73■■■■□ 3.31
H2AFV-205ENST00000381124 ZBTB1Q9Y2K1 713 aa35.73■■■■□ 3.31
H2AFV-205ENST00000381124 SOS1Q07889 1333 aaPredicted RBP35.73■■■■□ 3.31
H2AFV-205ENST00000381124 STARD3NLO95772 234 aa35.72■■■■□ 3.31
H2AFV-205ENST00000381124 FMNL2Q96PY5 1086 aa35.72■■■■□ 3.31
H2AFV-205ENST00000381124 USP42Q9H9J4 1324 aaKnown RBP35.72■■■■□ 3.31
H2AFV-205ENST00000381124 HEG1Q9ULI3 1381 aa35.72■■■■□ 3.31
H2AFV-205ENST00000381124 C4AP0C0L4 1744 aa35.71■■■■□ 3.31
H2AFV-205ENST00000381124 UBR2Q8IWV8 1755 aa35.71■■■■□ 3.31
H2AFV-205ENST00000381124 HTATSF1O43719 755 aaKnown RBP35.7■■■■□ 3.31
H2AFV-205ENST00000381124 MYBBP1AQ9BQG0 1328 aaKnown RBP35.7■■■■□ 3.31
H2AFV-205ENST00000381124 PNNQ9H307 717 aaKnown RBP35.7■■■■□ 3.31
H2AFV-205ENST00000381124 PARP3Q9Y6F1 533 aa35.7■■■■□ 3.31
H2AFV-205ENST00000381124 SIPA1L3O60292 1781 aaPredicted RBP35.69■■■■□ 3.3
H2AFV-205ENST00000381124 KCNQ3O43525 872 aa35.69■■■■□ 3.3
H2AFV-205ENST00000381124 ZPR1O75312 459 aa35.69■■■■□ 3.3
H2AFV-205ENST00000381124 CANXP27824 592 aaKnown RBP35.69■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms