RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 INTS3Q68E01 1043 aaKnown RBP27.21■■□□□ 1.95
GMDS-202ENST00000380815 PHKG2P15735 406 aa27.2■■□□□ 1.94
GMDS-202ENST00000380815 CHMP4AQ9BY43 222 aa27.2■■□□□ 1.94
GMDS-202ENST00000380815 PKD1L3Q7Z443 1732 aa27.19■■□□□ 1.94
GMDS-202ENST00000380815 IFNL2Q8IZJ0 200 aa27.19■■□□□ 1.94
GMDS-202ENST00000380815 SIPA1L3O60292 1781 aaPredicted RBP27.18■■□□□ 1.94
GMDS-202ENST00000380815 TOM1L2Q6ZVM7 507 aa27.17■■□□□ 1.94
GMDS-202ENST00000380815 CACNA1FO60840 1977 aa27.17■■□□□ 1.94
GMDS-202ENST00000380815 KDM6AO15550 1401 aaPredicted RBP27.15■■□□□ 1.94
GMDS-202ENST00000380815 G2E3Q7L622 706 aa27.15■■□□□ 1.94
GMDS-202ENST00000380815 CARD10Q9BWT7 1032 aa27.15■■□□□ 1.94
GMDS-202ENST00000380815 SCN11AQ9UI33 1791 aa27.15■■□□□ 1.94
GMDS-202ENST00000380815 HDGFL1Q5TGJ6 251 aa27.14■■□□□ 1.94
GMDS-202ENST00000380815 KCNQ3O43525 872 aa27.14■■□□□ 1.93
GMDS-202ENST00000380815 COL22A1Q8NFW1 1626 aaPredicted RBP27.13■■□□□ 1.93
GMDS-202ENST00000380815 HSP90AB1P08238 724 aaKnown RBP27.13■■□□□ 1.93
GMDS-202ENST00000380815 DCAF5Q96JK2 942 aa27.13■■□□□ 1.93
GMDS-202ENST00000380815 PARP4Q9UKK3 1724 aaKnown RBP27.13■■□□□ 1.93
GMDS-202ENST00000380815 CYP27B1O15528 508 aa27.12■■□□□ 1.93
GMDS-202ENST00000380815 FLIIQ13045 1269 aa27.12■■□□□ 1.93
GMDS-202ENST00000380815 HEG1Q9ULI3 1381 aa27.12■■□□□ 1.93
GMDS-202ENST00000380815 SLC52A2Q9HAB3 445 aa27.12■■□□□ 1.93
GMDS-202ENST00000380815 PDE4AP27815 886 aa27.11■■□□□ 1.93
GMDS-202ENST00000380815 RGS3P49796 1198 aa27.11■■□□□ 1.93
GMDS-202ENST00000380815 EVA1CP58658 441 aa27.11■■□□□ 1.93
GMDS-202ENST00000380815 NECTIN2Q92692 538 aa27.1■■□□□ 1.93
GMDS-202ENST00000380815 SMC5Q8IY18 1101 aa27.09■■□□□ 1.93
GMDS-202ENST00000380815 MRC1P22897 1456 aa27.09■■□□□ 1.93
GMDS-202ENST00000380815 CCT4P50991 539 aaKnown RBP27.09■■□□□ 1.93
GMDS-202ENST00000380815 LARP1Q6PKG0 1096 aaKnown RBP27.09■■□□□ 1.93
GMDS-202ENST00000380815 BACH2Q9BYV9 841 aa27.09■■□□□ 1.93
GMDS-202ENST00000380815 STRN4Q9NRL3 753 aa27.09■■□□□ 1.93
GMDS-202ENST00000380815 PDZRN3Q9UPQ7 1066 aa27.09■■□□□ 1.93
GMDS-202ENST00000380815 PCDH11XQ9BZA7 1347 aa27.07■■□□□ 1.92
GMDS-202ENST00000380815 PCDH11YQ9BZA8 1340 aa27.07■■□□□ 1.92
GMDS-202ENST00000380815 IL2RBP14784 551 aa27.07■■□□□ 1.92
GMDS-202ENST00000380815 ZCRB1Q8TBF4 217 aaKnown RBP27.07■■□□□ 1.92
GMDS-202ENST00000380815 GIGYF1O75420 1035 aaPredicted RBP27.07■■□□□ 1.92
GMDS-202ENST00000380815 FKBP5Q13451 457 aaPredicted RBP27.07■■□□□ 1.92
GMDS-202ENST00000380815 COL14A1Q05707 1796 aaKnown RBP27.06■■□□□ 1.92
GMDS-202ENST00000380815 EIF2S2P20042 333 aaKnown RBP27.06■■□□□ 1.92
GMDS-202ENST00000380815 F6X3S4 739 aa27.05■■□□□ 1.92
GMDS-202ENST00000380815 ZNF790Q6PG37 636 aa27.05■■□□□ 1.92
GMDS-202ENST00000380815 NFATC2IPQ8NCF5 419 aa27.05■■□□□ 1.92
GMDS-202ENST00000380815 C1orf115Q9H7X2 142 aa27.05■■□□□ 1.92
GMDS-202ENST00000380815 BTG4Q9NY30 223 aa27.04■■□□□ 1.92
GMDS-202ENST00000380815 TOM1O60784 492 aa27.04■■□□□ 1.92
GMDS-202ENST00000380815 COL16A1Q07092 1604 aaPredicted RBP27.02■■□□□ 1.92
GMDS-202ENST00000380815 SLC4A10Q6U841 1118 aa27.02■■□□□ 1.92
GMDS-202ENST00000380815 CHPF2Q9P2E5 772 aa27.02■■□□□ 1.92
GMDS-202ENST00000380815 PXDNLA1KZ92 1463 aa27.02■■□□□ 1.92
GMDS-202ENST00000380815 PHLPP1O60346 1717 aa27.02■■□□□ 1.92
GMDS-202ENST00000380815 SIRT2Q8IXJ6 389 aa27.01■■□□□ 1.91
GMDS-202ENST00000380815 GCC1Q96CN9 775 aa27.01■■□□□ 1.91
GMDS-202ENST00000380815 DBF4Q9UBU7 674 aaPredicted RBP27.01■■□□□ 1.91
GMDS-202ENST00000380815 NKX1-1Q15270 411 aaPredicted RBP27■■□□□ 1.91
GMDS-202ENST00000380815 FAM161AQ3B820 660 aa27■■□□□ 1.91
GMDS-202ENST00000380815 PHAXQ9H814 394 aaKnown RBP27■■□□□ 1.91
GMDS-202ENST00000380815 MEIS3Q99687 375 aa26.99■■□□□ 1.91
GMDS-202ENST00000380815 CABP4P57796 275 aa26.99■■□□□ 1.91
GMDS-202ENST00000380815 SLC39A6Q13433 755 aa26.99■■□□□ 1.91
GMDS-202ENST00000380815 RPAP2Q8IXW5 612 aaPredicted RBP26.99■■□□□ 1.91
GMDS-202ENST00000380815 N4BP2Q86UW6 1770 aaPredicted RBP26.98■■□□□ 1.91
GMDS-202ENST00000380815 ATP10DQ9P241 1426 aa26.97■■□□□ 1.91
GMDS-202ENST00000380815 ERVV-2B6SEH9 535 aa26.97■■□□□ 1.91
GMDS-202ENST00000380815 NUCB1Q02818 461 aa26.97■■□□□ 1.91
GMDS-202ENST00000380815 ANKRD44Q8N8A2 993 aa26.97■■□□□ 1.91
GMDS-202ENST00000380815 SHANK3Q9BYB0 1731 aa26.96■■□□□ 1.91
GMDS-202ENST00000380815 C8orf34Q49A92 452 aa26.95■■□□□ 1.9
GMDS-202ENST00000380815 TTC5Q8N0Z6 440 aa26.95■■□□□ 1.9
GMDS-202ENST00000380815 PRAMEF22A3QJZ6 481 aa26.94■■□□□ 1.9
GMDS-202ENST00000380815 CEP85Q6P2H3 762 aa26.94■■□□□ 1.9
GMDS-202ENST00000380815 ZNF496Q96IT1 587 aaPredicted RBP26.94■■□□□ 1.9
GMDS-202ENST00000380815 HYPKQ9NX55 129 aa26.93■■□□□ 1.9
GMDS-202ENST00000380815 USP35Q9P2H5 1018 aa26.93■■□□□ 1.9
GMDS-202ENST00000380815 GNAI3P08754 354 aa26.92■■□□□ 1.9
GMDS-202ENST00000380815 PIP4K2BP78356 416 aa26.92■■□□□ 1.9
GMDS-202ENST00000380815 CHD1LQ86WJ1 897 aa26.92■■□□□ 1.9
GMDS-202ENST00000380815 DDX54Q8TDD1 881 aaKnown RBP26.92■■□□□ 1.9
GMDS-202ENST00000380815 FMNL2Q96PY5 1086 aa26.92■■□□□ 1.9
GMDS-202ENST00000380815 DDX21Q9NR30 783 aaKnown RBP eCLIP26.92■■□□□ 1.9
GMDS-202ENST00000380815 SNRPA1P09661 255 aaKnown RBP26.91■■□□□ 1.9
GMDS-202ENST00000380815 DISP2A7MBM2 1401 aa26.9■■□□□ 1.9
GMDS-202ENST00000380815 ANXA1P04083 346 aa26.9■■□□□ 1.9
GMDS-202ENST00000380815 GNAI2P04899 355 aa26.9■■□□□ 1.9
GMDS-202ENST00000380815 DNAAF4Q8WXU2 420 aa26.9■■□□□ 1.9
GMDS-202ENST00000380815 DCTPP1Q9H773 170 aa26.9■■□□□ 1.9
GMDS-202ENST00000380815 C5P01031 1676 aa26.9■■□□□ 1.9
GMDS-202ENST00000380815 PI4KAP2A4QPH2 592 aa26.89■■□□□ 1.9
GMDS-202ENST00000380815 PI4KAP1Q8N8J0 262 aa26.89■■□□□ 1.9
GMDS-202ENST00000380815 PROSER3Q2NL68 480 aa26.89■■□□□ 1.89
GMDS-202ENST00000380815 SRCIN1Q9C0H9 1055 aa26.89■■□□□ 1.89
GMDS-202ENST00000380815 ADCY9O60503 1353 aa26.88■■□□□ 1.89
GMDS-202ENST00000380815 PLCH1Q4KWH8 1693 aa26.88■■□□□ 1.89
GMDS-202ENST00000380815 PDIA6Q15084 440 aa26.88■■□□□ 1.89
GMDS-202ENST00000380815 ANKRD45Q5TZF3 282 aa26.86■■□□□ 1.89
GMDS-202ENST00000380815 USP44Q9H0E7 712 aa26.86■■□□□ 1.89
GMDS-202ENST00000380815 UBAP1LF5GYI3 381 aa26.86■■□□□ 1.89
GMDS-202ENST00000380815 HMMRO75330 724 aa26.86■■□□□ 1.89
GMDS-202ENST00000380815 BEND3Q5T5X7 828 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms