RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 NBPF4Q96M43 638 aa24.73■■□□□ 1.55
EBF1-202ENST00000380654 CACNA1FO60840 1977 aa24.73■■□□□ 1.55
EBF1-202ENST00000380654 AK9Q5TCS8 1911 aa24.72■■□□□ 1.55
EBF1-202ENST00000380654 TRHP20396 242 aaPredicted RBP24.72■■□□□ 1.55
EBF1-202ENST00000380654 RABEP1Q15276 862 aa24.72■■□□□ 1.55
EBF1-202ENST00000380654 PHAXQ9H814 394 aaKnown RBP24.72■■□□□ 1.55
EBF1-202ENST00000380654 PLEKHG5O94827 1062 aa24.72■■□□□ 1.55
EBF1-202ENST00000380654 IP6K1Q92551 441 aa24.72■■□□□ 1.55
EBF1-202ENST00000380654 LRRFIP2Q9Y608 721 aaKnown RBP24.72■■□□□ 1.55
EBF1-202ENST00000380654 ESCO1Q5FWF5 840 aa24.71■■□□□ 1.55
EBF1-202ENST00000380654 CASC1Q6TDU7 716 aa24.71■■□□□ 1.55
EBF1-202ENST00000380654 RGPD2P0DJD1 1756 aa24.71■■□□□ 1.55
EBF1-202ENST00000380654 GNAI3P08754 354 aa24.7■■□□□ 1.55
EBF1-202ENST00000380654 HDGFL1Q5TGJ6 251 aa24.7■■□□□ 1.55
EBF1-202ENST00000380654 ANKLE2Q86XL3 938 aa24.7■■□□□ 1.55
EBF1-202ENST00000380654 OSBPL3Q9H4L5 887 aa24.7■■□□□ 1.55
EBF1-202ENST00000380654 LGR6Q9HBX8 967 aa24.7■■□□□ 1.55
EBF1-202ENST00000380654 NFAT5O94916 1531 aa24.7■■□□□ 1.55
EBF1-202ENST00000380654 L1TD1Q5T7N2 865 aaKnown RBP24.7■■□□□ 1.54
EBF1-202ENST00000380654 FSD2A1L4K1 749 aa24.69■■□□□ 1.54
EBF1-202ENST00000380654 GOLGA6L3A6NEY3 463 aa24.69■■□□□ 1.54
EBF1-202ENST00000380654 SSFA2P28290 1259 aa24.69■■□□□ 1.54
EBF1-202ENST00000380654 ATP8B2P98198 1209 aa24.69■■□□□ 1.54
EBF1-202ENST00000380654 PSME1Q06323 249 aa24.69■■□□□ 1.54
EBF1-202ENST00000380654 USP44Q9H0E7 712 aa24.69■■□□□ 1.54
EBF1-202ENST00000380654 SALL3Q9BXA9 1300 aa24.69■■□□□ 1.54
EBF1-202ENST00000380654 LRRC59Q96AG4 307 aaKnown RBP24.68■■□□□ 1.54
EBF1-202ENST00000380654 LRRCC1Q9C099 1032 aa24.68■■□□□ 1.54
EBF1-202ENST00000380654 EIF5BO60841 1220 aaKnown RBP24.68■■□□□ 1.54
EBF1-202ENST00000380654 EIF2S2P20042 333 aaKnown RBP24.68■■□□□ 1.54
EBF1-202ENST00000380654 XRCC6P12956 609 aaKnown RBP eCLIP24.67■■□□□ 1.54
EBF1-202ENST00000380654 BABAM1Q9NWV8 329 aa24.67■■□□□ 1.54
EBF1-202ENST00000380654 CEMIPQ8WUJ3 1361 aa24.67■■□□□ 1.54
EBF1-202ENST00000380654 GBP4Q96PP9 640 aa24.67■■□□□ 1.54
EBF1-202ENST00000380654 ERC2O15083 957 aa24.66■■□□□ 1.54
EBF1-202ENST00000380654 N4BP2Q86UW6 1770 aaPredicted RBP24.66■■□□□ 1.54
EBF1-202ENST00000380654 KCNQ3O43525 872 aa24.66■■□□□ 1.54
EBF1-202ENST00000380654 XPCQ01831 940 aaPredicted RBP24.66■■□□□ 1.54
EBF1-202ENST00000380654 TUBGCP6Q96RT7 1819 aa24.65■■□□□ 1.54
EBF1-202ENST00000380654 IBTKQ9P2D0 1353 aaPredicted RBP24.65■■□□□ 1.54
EBF1-202ENST00000380654 REC8O95072 547 aa24.65■■□□□ 1.54
EBF1-202ENST00000380654 SOS1Q07889 1333 aaPredicted RBP24.65■■□□□ 1.54
EBF1-202ENST00000380654 MX1P20591 662 aa24.64■■□□□ 1.53
EBF1-202ENST00000380654 PANK2Q9BZ23 570 aa24.64■■□□□ 1.53
EBF1-202ENST00000380654 UBTFL1P0CB47 393 aaPredicted RBP24.63■■□□□ 1.53
EBF1-202ENST00000380654 EIF4A1P60842 406 aaKnown RBP24.63■■□□□ 1.53
EBF1-202ENST00000380654 ADGRL3Q9HAR2 1447 aa24.62■■□□□ 1.53
EBF1-202ENST00000380654 PXDNLA1KZ92 1463 aa24.62■■□□□ 1.53
EBF1-202ENST00000380654 ORAI2Q96SN7 254 aa24.62■■□□□ 1.53
EBF1-202ENST00000380654 CHPF2Q9P2E5 772 aa24.62■■□□□ 1.53
EBF1-202ENST00000380654 ANXA1P04083 346 aa24.61■■□□□ 1.53
EBF1-202ENST00000380654 MED1Q15648 1581 aaPredicted RBP24.61■■□□□ 1.53
EBF1-202ENST00000380654 MPRIPQ6WCQ1 1025 aa24.61■■□□□ 1.53
EBF1-202ENST00000380654 IL1RAPL2Q9NP60 686 aa24.61■■□□□ 1.53
EBF1-202ENST00000380654 KDM3BQ7LBC6 1761 aa24.6■■□□□ 1.53
EBF1-202ENST00000380654 RILPL2Q969X0 211 aa24.6■■□□□ 1.53
EBF1-202ENST00000380654 TRIM6-TRIM34B2RNG4 842 aa24.59■■□□□ 1.53
EBF1-202ENST00000380654 PKP1Q13835 747 aa24.59■■□□□ 1.53
EBF1-202ENST00000380654 ZNF530Q6P9A1 599 aaPredicted RBP24.59■■□□□ 1.53
EBF1-202ENST00000380654 UNC5CLQ8IV45 518 aa24.59■■□□□ 1.53
EBF1-202ENST00000380654 KCNH5Q8NCM2 988 aa24.59■■□□□ 1.53
EBF1-202ENST00000380654 ST18O60284 1047 aa24.58■■□□□ 1.53
EBF1-202ENST00000380654 ZGPATQ8N5A5 531 aaKnown RBP24.58■■□□□ 1.53
EBF1-202ENST00000380654 ESYT1Q9BSJ8 1104 aa24.58■■□□□ 1.53
EBF1-202ENST00000380654 SRCIN1Q9C0H9 1055 aa24.58■■□□□ 1.53
EBF1-202ENST00000380654 ZNF142P52746 1687 aaPredicted RBP24.57■■□□□ 1.52
EBF1-202ENST00000380654 NBPF7P0C2Y1 421 aaPredicted RBP24.57■■□□□ 1.52
EBF1-202ENST00000380654 LMOD2Q6P5Q4 547 aa24.57■■□□□ 1.52
EBF1-202ENST00000380654 PPP1R42Q7Z4L9 355 aa24.57■■□□□ 1.52
EBF1-202ENST00000380654 BTBD11A6QL63 1104 aa24.57■■□□□ 1.52
EBF1-202ENST00000380654 SSH3Q8TE77 659 aa24.57■■□□□ 1.52
EBF1-202ENST00000380654 PI4KAP2A4QPH2 592 aa24.56■■□□□ 1.52
EBF1-202ENST00000380654 BAG4O95429 457 aaKnown RBP24.56■■□□□ 1.52
EBF1-202ENST00000380654 GCP02774 474 aa24.56■■□□□ 1.52
EBF1-202ENST00000380654 TEFQ10587 303 aa24.56■■□□□ 1.52
EBF1-202ENST00000380654 PI4KAP1Q8N8J0 262 aa24.56■■□□□ 1.52
EBF1-202ENST00000380654 PXDNQ92626 1479 aa24.56■■□□□ 1.52
EBF1-202ENST00000380654 LMO7Q8WWI1 1683 aa24.56■■□□□ 1.52
EBF1-202ENST00000380654 NUTM1Q86Y26 1132 aa24.56■■□□□ 1.52
EBF1-202ENST00000380654 STAP2Q9UGK3 403 aa24.56■■□□□ 1.52
EBF1-202ENST00000380654 CHMLP26374 656 aa24.55■■□□□ 1.52
EBF1-202ENST00000380654 AKAP4Q5JQC9 854 aa24.55■■□□□ 1.52
EBF1-202ENST00000380654 SURF6O75683 361 aaKnown RBP24.54■■□□□ 1.52
EBF1-202ENST00000380654 PALD1Q9ULE6 856 aa24.54■■□□□ 1.52
EBF1-202ENST00000380654 PHRF1Q9P1Y6 1649 aaKnown RBP24.54■■□□□ 1.52
EBF1-202ENST00000380654 BEND3Q5T5X7 828 aa24.53■■□□□ 1.52
EBF1-202ENST00000380654 CLEC17AQ6ZS10 378 aa24.53■■□□□ 1.52
EBF1-202ENST00000380654 ARHGEF25Q86VW2 580 aa24.53■■□□□ 1.52
EBF1-202ENST00000380654 GAS2L3Q86XJ1 694 aa24.53■■□□□ 1.52
EBF1-202ENST00000380654 PLEKHO1Q53GL0 409 aaPredicted RBP24.53■■□□□ 1.52
EBF1-202ENST00000380654 DNAAF4Q8WXU2 420 aa24.53■■□□□ 1.52
EBF1-202ENST00000380654 SRGAP3O43295 1099 aa24.52■■□□□ 1.52
EBF1-202ENST00000380654 FAM43AQ8N2R8 423 aa24.52■■□□□ 1.52
EBF1-202ENST00000380654 GRPEL1Q9HAV7 217 aa24.52■■□□□ 1.52
EBF1-202ENST00000380654 CYP2E1P05181 493 aaPredicted RBP24.52■■□□□ 1.52
EBF1-202ENST00000380654 MRE11P49959 708 aa24.52■■□□□ 1.52
EBF1-202ENST00000380654 NEK4P51957 841 aa24.52■■□□□ 1.52
EBF1-202ENST00000380654 POLA2Q14181 598 aa24.52■■□□□ 1.52
EBF1-202ENST00000380654 SKOR2Q2VWA4 1001 aaPredicted RBP24.52■■□□□ 1.52
EBF1-202ENST00000380654 IL25Q9H293 177 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms