RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
COL2A1-202ENST00000380518 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
COL2A1-202ENST00000380518 BOLA2Q9H3K6 86 aa18.79■□□□□ 0.6
COL2A1-202ENST00000380518 EPB41L2O43491 1005 aaKnown RBP18.78■□□□□ 0.6
COL2A1-202ENST00000380518 ABCF2Q9UG63 623 aa18.78■□□□□ 0.6
COL2A1-202ENST00000380518 PLEKHH1Q9ULM0 1364 aa18.78■□□□□ 0.6
COL2A1-202ENST00000380518 KIF2AO00139 706 aaPredicted RBP18.78■□□□□ 0.6
COL2A1-202ENST00000380518 ARHGAP29Q52LW3 1261 aa18.78■□□□□ 0.6
COL2A1-202ENST00000380518 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
COL2A1-202ENST00000380518 NEFHP12036 1026 aa18.77■□□□□ 0.6
COL2A1-202ENST00000380518 EIF5P55010 431 aaKnown RBP18.77■□□□□ 0.6
COL2A1-202ENST00000380518 CCDC183Q5T5S1 534 aa18.77■□□□□ 0.6
COL2A1-202ENST00000380518 NME9Q86XW9 330 aa18.77■□□□□ 0.6
COL2A1-202ENST00000380518 ARHGEF11O15085 1522 aa18.77■□□□□ 0.6
COL2A1-202ENST00000380518 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
COL2A1-202ENST00000380518 HMGB1P09429 215 aaKnown RBP18.77■□□□□ 0.6
COL2A1-202ENST00000380518 IFIT1P09914 478 aaKnown RBP18.77■□□□□ 0.59
COL2A1-202ENST00000380518 ANO10Q9NW15 660 aa18.77■□□□□ 0.59
COL2A1-202ENST00000380518 CCDC196A0A1B0GTZ2 297 aa18.76■□□□□ 0.59
COL2A1-202ENST00000380518 SFPQP23246 707 aaKnown RBP eCLIP18.76■□□□□ 0.59
COL2A1-202ENST00000380518 RBM5P52756 815 aaKnown RBP eCLIP18.76■□□□□ 0.59
COL2A1-202ENST00000380518 NUTM2BA6NNL0 878 aaPredicted RBP18.76■□□□□ 0.59
COL2A1-202ENST00000380518 NUTM2EB1AL46 878 aaPredicted RBP18.76■□□□□ 0.59
COL2A1-202ENST00000380518 CAMK4Q16566 473 aa18.76■□□□□ 0.59
COL2A1-202ENST00000380518 NUTM2AQ8IVF1 878 aaPredicted RBP18.76■□□□□ 0.59
COL2A1-202ENST00000380518 DNAAF4Q8WXU2 420 aa18.76■□□□□ 0.59
COL2A1-202ENST00000380518 ZSCAN29Q8IWY8 852 aaPredicted RBP18.76■□□□□ 0.59
COL2A1-202ENST00000380518 UBXN4Q92575 508 aa18.76■□□□□ 0.59
COL2A1-202ENST00000380518 ABCC5O15440 1437 aa18.76■□□□□ 0.59
COL2A1-202ENST00000380518 TRIM27P14373 513 aa18.76■□□□□ 0.59
COL2A1-202ENST00000380518 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
COL2A1-202ENST00000380518 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
COL2A1-202ENST00000380518 PTCD1O75127 700 aaKnown RBP18.75■□□□□ 0.59
COL2A1-202ENST00000380518 ZNF287Q9HBT7 754 aa18.75■□□□□ 0.59
COL2A1-202ENST00000380518 LIMCH1Q9UPQ0 1083 aa18.75■□□□□ 0.59
COL2A1-202ENST00000380518 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
COL2A1-202ENST00000380518 F6X3S4 739 aa18.75■□□□□ 0.59
COL2A1-202ENST00000380518 CAMSAP2Q08AD1 1489 aa18.75■□□□□ 0.59
COL2A1-202ENST00000380518 MYD88Q99836 296 aa18.75■□□□□ 0.59
COL2A1-202ENST00000380518 PTPRCP08575 1304 aa18.75■□□□□ 0.59
COL2A1-202ENST00000380518 KIAA0754O94854 1291 aa18.74■□□□□ 0.59
COL2A1-202ENST00000380518 TBC1D2Q9BYX2 928 aa18.74■□□□□ 0.59
COL2A1-202ENST00000380518 LRRFIP2Q9Y608 721 aaKnown RBP18.74■□□□□ 0.59
COL2A1-202ENST00000380518 DBF4Q9UBU7 674 aaPredicted RBP18.74■□□□□ 0.59
COL2A1-202ENST00000380518 C8orf76Q96K31 380 aa18.74■□□□□ 0.59
COL2A1-202ENST00000380518 NAPBQ9H115 298 aa18.74■□□□□ 0.59
COL2A1-202ENST00000380518 KIAA1328Q86T90 577 aa18.73■□□□□ 0.59
COL2A1-202ENST00000380518 PIBF1Q8WXW3 757 aa18.73■□□□□ 0.59
COL2A1-202ENST00000380518 PDCL2Q8N4E4 241 aa18.73■□□□□ 0.59
COL2A1-202ENST00000380518 NCOA1Q15788 1441 aa18.73■□□□□ 0.59
COL2A1-202ENST00000380518 SKAP1Q86WV1 359 aa18.73■□□□□ 0.59
COL2A1-202ENST00000380518 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
COL2A1-202ENST00000380518 ZNF76P36508 570 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 PAF1Q8N7H5 531 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 BMP2KLQ5H9B9 411 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
COL2A1-202ENST00000380518 HYPKQ9NX55 129 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 PTPN14Q15678 1187 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 SEPT7Q16181 437 aaKnown RBP18.72■□□□□ 0.59
COL2A1-202ENST00000380518 BICDL1Q6ZP65 573 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 TAF4BQ92750 862 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 CCDC8Q9H0W5 538 aaPredicted RBP18.72■□□□□ 0.59
COL2A1-202ENST00000380518 TMOD3Q9NYL9 352 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 NSD2O96028 1365 aa18.72■□□□□ 0.59
COL2A1-202ENST00000380518 ZSCAN12O43309 604 aa18.71■□□□□ 0.59
COL2A1-202ENST00000380518 FLIIQ13045 1269 aa18.71■□□□□ 0.59
COL2A1-202ENST00000380518 ZRSR2Q15696 482 aaKnown RBP18.71■□□□□ 0.59
COL2A1-202ENST00000380518 CAVIN4Q5BKX8 364 aa18.71■□□□□ 0.59
COL2A1-202ENST00000380518 ZNF397Q8NF99 534 aaPredicted RBP18.71■□□□□ 0.59
COL2A1-202ENST00000380518 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.59
COL2A1-202ENST00000380518 CTAGE5O15320 804 aa18.71■□□□□ 0.59
COL2A1-202ENST00000380518 SSFA2P28290 1259 aa18.71■□□□□ 0.59
COL2A1-202ENST00000380518 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
COL2A1-202ENST00000380518 USP5P45974 858 aa18.71■□□□□ 0.59
COL2A1-202ENST00000380518 MAP3K12Q12852 859 aa18.71■□□□□ 0.59
COL2A1-202ENST00000380518 DHX29Q7Z478 1369 aaKnown RBP18.71■□□□□ 0.59
COL2A1-202ENST00000380518 SEPT11Q9NVA2 429 aaKnown RBP18.71■□□□□ 0.59
COL2A1-202ENST00000380518 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
COL2A1-202ENST00000380518 TNPO1Q92973 898 aaKnown RBP18.7■□□□□ 0.58
COL2A1-202ENST00000380518 CENPHQ9H3R5 247 aa18.7■□□□□ 0.58
COL2A1-202ENST00000380518 ANKRD18AQ8IVF6 992 aa18.7■□□□□ 0.58
COL2A1-202ENST00000380518 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
COL2A1-202ENST00000380518 GOLGA6L7A0A1B0GV03 622 aa18.7■□□□□ 0.58
COL2A1-202ENST00000380518 RRP9O43818 475 aaKnown RBP18.7■□□□□ 0.58
COL2A1-202ENST00000380518 CTCFLQ8NI51 663 aaPredicted RBP18.7■□□□□ 0.58
COL2A1-202ENST00000380518 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
COL2A1-202ENST00000380518 ECHDC1Q9NTX5 307 aa18.7■□□□□ 0.58
COL2A1-202ENST00000380518 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
COL2A1-202ENST00000380518 GBP3Q9H0R5 595 aa18.7■□□□□ 0.58
COL2A1-202ENST00000380518 PCF11O94913 1555 aaKnown RBP18.69■□□□□ 0.58
COL2A1-202ENST00000380518 CCDC148Q8NFR7 591 aa18.69■□□□□ 0.58
COL2A1-202ENST00000380518 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
COL2A1-202ENST00000380518 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
COL2A1-202ENST00000380518 PHF8Q9UPP1 1060 aa18.69■□□□□ 0.58
COL2A1-202ENST00000380518 HSP90AB3PQ58FF7 597 aa18.69■□□□□ 0.58
COL2A1-202ENST00000380518 USHBP1Q8N6Y0 703 aa18.69■□□□□ 0.58
COL2A1-202ENST00000380518 PTPN23Q9H3S7 1636 aa18.69■□□□□ 0.58
COL2A1-202ENST00000380518 EVI5LQ96CN4 794 aa18.69■□□□□ 0.58
COL2A1-202ENST00000380518 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms