RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
ITSN1-201ENST00000379960 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
ITSN1-201ENST00000379960 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
ITSN1-201ENST00000379960 A0A1W2PP64 1363 aa13.07□□□□□ -0.32
ITSN1-201ENST00000379960 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
ITSN1-201ENST00000379960 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
ITSN1-201ENST00000379960 NPC1L1Q9UHC9 1359 aa13.06□□□□□ -0.32
ITSN1-201ENST00000379960 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
ITSN1-201ENST00000379960 RLBP1P12271 317 aa13.06□□□□□ -0.32
ITSN1-201ENST00000379960 NCAPGQ9BPX3 1015 aa13.06□□□□□ -0.32
ITSN1-201ENST00000379960 CARD10Q9BWT7 1032 aa13.06□□□□□ -0.32
ITSN1-201ENST00000379960 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
ITSN1-201ENST00000379960 CEP170BQ9Y4F5 1589 aaPredicted RBP13.05□□□□□ -0.32
ITSN1-201ENST00000379960 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
ITSN1-201ENST00000379960 FBLN1P23142 703 aa13.05□□□□□ -0.32
ITSN1-201ENST00000379960 ICE2Q659A1 982 aa13.05□□□□□ -0.32
ITSN1-201ENST00000379960 PYCARDQ9ULZ3 195 aa13.05□□□□□ -0.32
ITSN1-201ENST00000379960 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
ITSN1-201ENST00000379960 C10orf67Q8IYJ2 551 aa13.05□□□□□ -0.32
ITSN1-201ENST00000379960 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
ITSN1-201ENST00000379960 ADCY5O95622 1261 aa13.04□□□□□ -0.32
ITSN1-201ENST00000379960 CYP2C19P33261 490 aa13.04□□□□□ -0.32
ITSN1-201ENST00000379960 NUCB2P80303 420 aa13.04□□□□□ -0.32
ITSN1-201ENST00000379960 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
ITSN1-201ENST00000379960 WASLO00401 505 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-201ENST00000379960 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-201ENST00000379960 TRIM66O15016 1216 aa13.03□□□□□ -0.32
ITSN1-201ENST00000379960 KIAA1524Q8TCG1 905 aa13.03□□□□□ -0.32
ITSN1-201ENST00000379960 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
ITSN1-201ENST00000379960 PLCB2Q00722 1185 aa13.02□□□□□ -0.32
ITSN1-201ENST00000379960 NOL10Q9BSC4 688 aaKnown RBP13.02□□□□□ -0.32
ITSN1-201ENST00000379960 APAF1O14727 1248 aa13.02□□□□□ -0.33
ITSN1-201ENST00000379960 HSP90B1P14625 803 aaKnown RBP13.02□□□□□ -0.33
ITSN1-201ENST00000379960 FOXD4L5Q5VV16 416 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-201ENST00000379960 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-201ENST00000379960 CEP83Q9Y592 693 aa13.02□□□□□ -0.33
ITSN1-201ENST00000379960 KCNA6P17658 529 aa13.02□□□□□ -0.33
ITSN1-201ENST00000379960 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.33
ITSN1-201ENST00000379960 BCL2L13Q9BXK5 485 aa13.02□□□□□ -0.33
ITSN1-201ENST00000379960 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
ITSN1-201ENST00000379960 ATAD2Q6PL18 1390 aa13.01□□□□□ -0.33
ITSN1-201ENST00000379960 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
ITSN1-201ENST00000379960 ANKLE2Q86XL3 938 aa13.01□□□□□ -0.33
ITSN1-201ENST00000379960 HOMEZQ8IX15 550 aa13.01□□□□□ -0.33
ITSN1-201ENST00000379960 SLIT1O75093 1534 aa13.01□□□□□ -0.33
ITSN1-201ENST00000379960 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
ITSN1-201ENST00000379960 SYCP1Q15431 976 aa13.01□□□□□ -0.33
ITSN1-201ENST00000379960 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
ITSN1-201ENST00000379960 SYT10Q6XYQ8 523 aa13.01□□□□□ -0.33
ITSN1-201ENST00000379960 HDGFL2Q7Z4V5 671 aaPredicted RBP13.01□□□□□ -0.33
ITSN1-201ENST00000379960 ARHGAP23Q9P227 1491 aa13.01□□□□□ -0.33
ITSN1-201ENST00000379960 ZRANB1Q9UGI0 708 aa13□□□□□ -0.33
ITSN1-201ENST00000379960 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
ITSN1-201ENST00000379960 NFATC2IPQ8NCF5 419 aa13□□□□□ -0.33
ITSN1-201ENST00000379960 NEK11Q8NG66 645 aa13□□□□□ -0.33
ITSN1-201ENST00000379960 KCNF1Q9H3M0 494 aa13□□□□□ -0.33
ITSN1-201ENST00000379960 ZNF446Q9NWS9 450 aa13□□□□□ -0.33
ITSN1-201ENST00000379960 DLC1Q96QB1 1528 aa13□□□□□ -0.33
ITSN1-201ENST00000379960 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
ITSN1-201ENST00000379960 CCDC172P0C7W6 258 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 CASQ1P31415 396 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 MTHFSP49914 203 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 CTR9Q6PD62 1173 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 POLKQ9UBT6 870 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 PPIP5K1Q6PFW1 1433 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 GUCY2CP25092 1073 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 HSPA2P54652 639 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 EGFL6Q8IUX8 553 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 C16orf45Q96MC5 204 aaPredicted RBP12.99□□□□□ -0.33
ITSN1-201ENST00000379960 CD163L1Q9NR16 1453 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
ITSN1-201ENST00000379960 MYO1CO00159 1063 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 FYB1O15117 783 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 TNNT1P13805 278 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.99□□□□□ -0.33
ITSN1-201ENST00000379960 LCMT1Q9UIC8 334 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 TBX22Q9Y458 520 aa12.99□□□□□ -0.33
ITSN1-201ENST00000379960 V9GYY5 206 aaPredicted RBP12.99□□□□□ -0.33
ITSN1-201ENST00000379960 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
ITSN1-201ENST00000379960 ZNF397Q8NF99 534 aaPredicted RBP12.98□□□□□ -0.33
ITSN1-201ENST00000379960 RBM6P78332 1123 aaKnown RBP12.98□□□□□ -0.33
ITSN1-201ENST00000379960 CREBRFQ8IUR6 639 aa12.98□□□□□ -0.33
ITSN1-201ENST00000379960 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
ITSN1-201ENST00000379960 MBD3O95983 291 aa12.97□□□□□ -0.33
ITSN1-201ENST00000379960 SART3Q15020 963 aaKnown RBP12.97□□□□□ -0.33
ITSN1-201ENST00000379960 SPC24Q8NBT2 197 aa12.97□□□□□ -0.33
ITSN1-201ENST00000379960 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.97□□□□□ -0.33
ITSN1-201ENST00000379960 REC8O95072 547 aa12.97□□□□□ -0.33
ITSN1-201ENST00000379960 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
ITSN1-201ENST00000379960 NME9Q86XW9 330 aa12.97□□□□□ -0.33
ITSN1-201ENST00000379960 GTF3C6Q969F1 213 aa12.97□□□□□ -0.33
ITSN1-201ENST00000379960 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
ITSN1-201ENST00000379960 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
ITSN1-201ENST00000379960 CPS1P31327 1500 aa12.96□□□□□ -0.33
ITSN1-201ENST00000379960 KRBA2Q6ZNG9 492 aa12.96□□□□□ -0.33
ITSN1-201ENST00000379960 ZGPATQ8N5A5 531 aaKnown RBP12.96□□□□□ -0.33
ITSN1-201ENST00000379960 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
ITSN1-201ENST00000379960 FAM53CQ9NYF3 392 aa12.96□□□□□ -0.33
ITSN1-201ENST00000379960 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms