RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
USP6NL-202ENST00000379237 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
USP6NL-202ENST00000379237 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
USP6NL-202ENST00000379237 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
USP6NL-202ENST00000379237 DACT1Q9NYF0 836 aa12.87□□□□□ -0.35
USP6NL-202ENST00000379237 VPS18Q9P253 973 aa12.87□□□□□ -0.35
USP6NL-202ENST00000379237 TFIP11Q9UBB9 837 aaKnown RBP12.87□□□□□ -0.35
USP6NL-202ENST00000379237 CCP110O43303 1012 aa12.87□□□□□ -0.35
USP6NL-202ENST00000379237 FOSBP53539 338 aa12.87□□□□□ -0.35
USP6NL-202ENST00000379237 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
USP6NL-202ENST00000379237 DTNBO60941 627 aa12.87□□□□□ -0.35
USP6NL-202ENST00000379237 GSPT1P15170 499 aaKnown RBP12.87□□□□□ -0.35
USP6NL-202ENST00000379237 ZNF75DP51815 510 aa12.87□□□□□ -0.35
USP6NL-202ENST00000379237 SF3A1Q15459 793 aaKnown RBP12.87□□□□□ -0.35
USP6NL-202ENST00000379237 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
USP6NL-202ENST00000379237 ASXL1Q8IXJ9 1541 aa12.86□□□□□ -0.35
USP6NL-202ENST00000379237 ZSWIM4Q9H7M6 989 aa12.86□□□□□ -0.35
USP6NL-202ENST00000379237 GEMIN8Q9NWZ8 242 aaKnown RBP12.86□□□□□ -0.35
USP6NL-202ENST00000379237 AK9Q5TCS8 1911 aa12.86□□□□□ -0.35
USP6NL-202ENST00000379237 PRAG1Q86YV5 1406 aa12.86□□□□□ -0.35
USP6NL-202ENST00000379237 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
USP6NL-202ENST00000379237 F13A1P00488 732 aa12.86□□□□□ -0.35
USP6NL-202ENST00000379237 MAP2K2P36507 400 aa12.86□□□□□ -0.35
USP6NL-202ENST00000379237 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
USP6NL-202ENST00000379237 NCAPGQ9BPX3 1015 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 GCC2Q8IWJ2 1684 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 SMC1AQ14683 1233 aaKnown RBP12.85□□□□□ -0.35
USP6NL-202ENST00000379237 PDILTQ8N807 584 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 MLECQ14165 292 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
USP6NL-202ENST00000379237 PPM1EQ8WY54 764 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 EPRSP07814 1512 aaKnown RBP12.85□□□□□ -0.35
USP6NL-202ENST00000379237 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
USP6NL-202ENST00000379237 ZKSCAN1P17029 563 aaPredicted RBP12.85□□□□□ -0.35
USP6NL-202ENST00000379237 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
USP6NL-202ENST00000379237 CCDC141Q6ZP82 1450 aa12.84□□□□□ -0.35
USP6NL-202ENST00000379237 ERLIN1O75477 346 aa12.84□□□□□ -0.35
USP6NL-202ENST00000379237 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-202ENST00000379237 ZNF526Q8TF50 670 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-202ENST00000379237 CACTINQ8WUQ7 758 aaKnown RBP12.84□□□□□ -0.35
USP6NL-202ENST00000379237 USP16Q9Y5T5 823 aa12.84□□□□□ -0.35
USP6NL-202ENST00000379237 PHACTR2O75167 634 aa12.84□□□□□ -0.35
USP6NL-202ENST00000379237 CLCN6P51797 869 aa12.84□□□□□ -0.35
USP6NL-202ENST00000379237 A0A0G2JS52 829 aa12.84□□□□□ -0.35
USP6NL-202ENST00000379237 PDCP20941 246 aa12.84□□□□□ -0.35
USP6NL-202ENST00000379237 GJB2P29033 226 aa12.84□□□□□ -0.35
USP6NL-202ENST00000379237 POLR1AO95602 1720 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-202ENST00000379237 MAP4K4O95819 1239 aaPredicted RBP12.83□□□□□ -0.35
USP6NL-202ENST00000379237 SYT1P21579 422 aa12.83□□□□□ -0.35
USP6NL-202ENST00000379237 CEP57L1Q8IYX8 460 aa12.83□□□□□ -0.35
USP6NL-202ENST00000379237 GOLGA5Q8TBA6 731 aa12.83□□□□□ -0.35
USP6NL-202ENST00000379237 DDX19AQ9NUU7 478 aaKnown RBP12.83□□□□□ -0.35
USP6NL-202ENST00000379237 GNAI1P63096 354 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 GGNBP2Q9H3C7 697 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 ZCCHC17Q9NP64 241 aaKnown RBP12.83□□□□□ -0.36
USP6NL-202ENST00000379237 GSDMDP57764 484 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 TMC6Q7Z403 805 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
USP6NL-202ENST00000379237 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.36
USP6NL-202ENST00000379237 CENPHQ9H3R5 247 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 YY1AP1Q9H869 796 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 SEC31AO94979 1220 aaKnown RBP12.83□□□□□ -0.36
USP6NL-202ENST00000379237 HMOX1P09601 288 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-202ENST00000379237 EXOC6BQ9Y2D4 811 aa12.83□□□□□ -0.36
USP6NL-202ENST00000379237 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
USP6NL-202ENST00000379237 EVCP57679 992 aa12.82□□□□□ -0.36
USP6NL-202ENST00000379237 ANKRD65E5RJM6 399 aa12.82□□□□□ -0.36
USP6NL-202ENST00000379237 ZBTB7BO15156 539 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-202ENST00000379237 JAKMIP3Q5VZ66 844 aa12.82□□□□□ -0.36
USP6NL-202ENST00000379237 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-202ENST00000379237 SMARCE1Q969G3 411 aa12.82□□□□□ -0.36
USP6NL-202ENST00000379237 RPAP2Q8IXW5 612 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-202ENST00000379237 GRIN2BQ13224 1484 aa12.82□□□□□ -0.36
USP6NL-202ENST00000379237 CARD6Q9BX69 1037 aa12.81□□□□□ -0.36
USP6NL-202ENST00000379237 SCAND2PQ9GZW5 306 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-202ENST00000379237 NSD3Q9BZ95 1437 aa12.81□□□□□ -0.36
USP6NL-202ENST00000379237 ARHGEF12Q9NZN5 1544 aa12.81□□□□□ -0.36
USP6NL-202ENST00000379237 ERCC4Q92889 916 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-202ENST00000379237 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
USP6NL-202ENST00000379237 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
USP6NL-202ENST00000379237 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 KIAA0754O94854 1291 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 STK3Q13188 491 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 PDRG1Q9NUG6 133 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.8□□□□□ -0.36
USP6NL-202ENST00000379237 C9orf84Q5VXU9 1444 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 LRRC8AQ8IWT6 810 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 JAKMIP1Q96N16 626 aaKnown RBP12.8□□□□□ -0.36
USP6NL-202ENST00000379237 CEP83Q9Y592 693 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 TULP2O00295 520 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 ESYT1Q9BSJ8 1104 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms