RNA–Protein interactions for RNA: ENST00000378947.7

C5orf56-202, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 621 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-202ENST00000378947 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
C5orf56-202ENST00000378947 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
C5orf56-202ENST00000378947 LINC00116Q8NCU8 138 aa13.45□□□□□ -0.26
C5orf56-202ENST00000378947 NLGN2Q8NFZ4 835 aa13.45□□□□□ -0.26
C5orf56-202ENST00000378947 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
C5orf56-202ENST00000378947 ATG3Q9NT62 314 aa13.45□□□□□ -0.26
C5orf56-202ENST00000378947 PLEKHG2Q9H7P9 1386 aa13.45□□□□□ -0.26
C5orf56-202ENST00000378947 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
C5orf56-202ENST00000378947 ITGB4P16144 1822 aa13.43□□□□□ -0.26
C5orf56-202ENST00000378947 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
C5orf56-202ENST00000378947 SSFA2P28290 1259 aa13.43□□□□□ -0.26
C5orf56-202ENST00000378947 ITPK1Q13572 414 aa13.43□□□□□ -0.26
C5orf56-202ENST00000378947 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
C5orf56-202ENST00000378947 IL13P35225 146 aa13.42□□□□□ -0.26
C5orf56-202ENST00000378947 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
C5orf56-202ENST00000378947 HMOX1P09601 288 aa13.41□□□□□ -0.26
C5orf56-202ENST00000378947 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
C5orf56-202ENST00000378947 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
C5orf56-202ENST00000378947 PTCD1O75127 700 aaKnown RBP13.4□□□□□ -0.26
C5orf56-202ENST00000378947 TRAPPC3LQ5T215 181 aa13.4□□□□□ -0.26
C5orf56-202ENST00000378947 ZNF784Q8NCA9 323 aaPredicted RBP13.4□□□□□ -0.26
C5orf56-202ENST00000378947 NFATC2IPQ8NCF5 419 aa13.4□□□□□ -0.26
C5orf56-202ENST00000378947 CD2APQ9Y5K6 639 aa13.4□□□□□ -0.26
C5orf56-202ENST00000378947 GRIN3BO60391 1043 aa13.39□□□□□ -0.27
C5orf56-202ENST00000378947 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
C5orf56-202ENST00000378947 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
C5orf56-202ENST00000378947 KDRP35968 1356 aa13.38□□□□□ -0.27
C5orf56-202ENST00000378947 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
C5orf56-202ENST00000378947 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
C5orf56-202ENST00000378947 RFC4P35249 363 aa13.37□□□□□ -0.27
C5orf56-202ENST00000378947 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
C5orf56-202ENST00000378947 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
C5orf56-202ENST00000378947 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
C5orf56-202ENST00000378947 COL24A1Q17RW2 1714 aa13.36□□□□□ -0.27
C5orf56-202ENST00000378947 MMP10P09238 476 aa13.36□□□□□ -0.27
C5orf56-202ENST00000378947 YBX3P16989 372 aaKnown RBP eCLIP13.36□□□□□ -0.27
C5orf56-202ENST00000378947 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
C5orf56-202ENST00000378947 NLGN1Q8N2Q7 840 aa13.35□□□□□ -0.27
C5orf56-202ENST00000378947 UBR3Q6ZT12 1888 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 ADRA2BP18089 450 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
C5orf56-202ENST00000378947 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 RPS6KA4O75676 772 aa13.33□□□□□ -0.28
C5orf56-202ENST00000378947 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
C5orf56-202ENST00000378947 CFAP53Q96M91 514 aa13.33□□□□□ -0.28
C5orf56-202ENST00000378947 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
C5orf56-202ENST00000378947 CRKLP46109 303 aaKnown RBP13.32□□□□□ -0.28
C5orf56-202ENST00000378947 PARP3Q9Y6F1 533 aa13.32□□□□□ -0.28
C5orf56-202ENST00000378947 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
C5orf56-202ENST00000378947 CHD4Q14839 1912 aa13.31□□□□□ -0.28
C5orf56-202ENST00000378947 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
C5orf56-202ENST00000378947 GYS1P13807 737 aa13.3□□□□□ -0.28
C5orf56-202ENST00000378947 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
C5orf56-202ENST00000378947 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
C5orf56-202ENST00000378947 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
C5orf56-202ENST00000378947 ZPR1O75312 459 aa13.29□□□□□ -0.28
C5orf56-202ENST00000378947 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
C5orf56-202ENST00000378947 TEFQ10587 303 aa13.29□□□□□ -0.28
C5orf56-202ENST00000378947 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
C5orf56-202ENST00000378947 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
C5orf56-202ENST00000378947 SRP68Q9UHB9 627 aaKnown RBP13.28□□□□□ -0.28
C5orf56-202ENST00000378947 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
C5orf56-202ENST00000378947 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
C5orf56-202ENST00000378947 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
C5orf56-202ENST00000378947 TGFB2P61812 414 aa13.27□□□□□ -0.29
C5orf56-202ENST00000378947 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
C5orf56-202ENST00000378947 INTS5Q6P9B9 1019 aaKnown RBP13.27□□□□□ -0.29
C5orf56-202ENST00000378947 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
C5orf56-202ENST00000378947 CICQ96RK0 1608 aaPredicted RBP13.27□□□□□ -0.29
C5orf56-202ENST00000378947 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 COL5A3P25940 1745 aaPredicted RBP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
C5orf56-202ENST00000378947 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
C5orf56-202ENST00000378947 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 FKBP8Q14318 412 aa13.26□□□□□ -0.29
C5orf56-202ENST00000378947 ZNF526Q8TF50 670 aaPredicted RBP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 USP42Q9H9J4 1324 aaKnown RBP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 SCN11AQ9UI33 1791 aa13.26□□□□□ -0.29
C5orf56-202ENST00000378947 COL3A1P02461 1466 aaPredicted RBP13.25□□□□□ -0.29
C5orf56-202ENST00000378947 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
C5orf56-202ENST00000378947 STARD3NLO95772 234 aa13.25□□□□□ -0.29
C5orf56-202ENST00000378947 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
C5orf56-202ENST00000378947 PPP2R1AP30153 589 aa13.25□□□□□ -0.29
C5orf56-202ENST00000378947 ATP10DQ9P241 1426 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 ANP32CO43423 234 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 FCHSD2O94868 740 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 DPEP1P16444 411 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
C5orf56-202ENST00000378947 USPL1Q5W0Q7 1092 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 NPM2Q86SE8 214 aaKnown RBP13.24□□□□□ -0.29
C5orf56-202ENST00000378947 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 GPBP1L1Q9HC44 474 aaPredicted RBP13.24□□□□□ -0.29
C5orf56-202ENST00000378947 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
C5orf56-202ENST00000378947 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
C5orf56-202ENST00000378947 MRC1P22897 1456 aa13.23□□□□□ -0.29
C5orf56-202ENST00000378947 C10orf71Q711Q0 1435 aa13.23□□□□□ -0.29
C5orf56-202ENST00000378947 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms