RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 FAM13BQ9NYF5 915 aa20.33■□□□□ 0.85
PCDHA1-201ENST00000378133 MTHFSDQ2M296 383 aaKnown RBP20.33■□□□□ 0.84
PCDHA1-201ENST00000378133 CRB1P82279 1406 aa20.32■□□□□ 0.84
PCDHA1-201ENST00000378133 MAP3K19Q56UN5 1328 aa20.32■□□□□ 0.84
PCDHA1-201ENST00000378133 USP6P35125 1406 aa20.32■□□□□ 0.84
PCDHA1-201ENST00000378133 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
PCDHA1-201ENST00000378133 PRDM4Q9UKN5 801 aa20.32■□□□□ 0.84
PCDHA1-201ENST00000378133 ZNF500O60304 480 aaPredicted RBP20.31■□□□□ 0.84
PCDHA1-201ENST00000378133 CASC1Q6TDU7 716 aa20.31■□□□□ 0.84
PCDHA1-201ENST00000378133 THEMISQ8N1K5 641 aaPredicted RBP20.31■□□□□ 0.84
PCDHA1-201ENST00000378133 RTF1Q92541 710 aaKnown RBP20.31■□□□□ 0.84
PCDHA1-201ENST00000378133 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.31■□□□□ 0.84
PCDHA1-201ENST00000378133 PEAK1Q9H792 1746 aa20.3■□□□□ 0.84
PCDHA1-201ENST00000378133 PRIM1P49642 420 aaKnown RBP20.3■□□□□ 0.84
PCDHA1-201ENST00000378133 PDLIM2Q96JY6 352 aa20.3■□□□□ 0.84
PCDHA1-201ENST00000378133 XPCQ01831 940 aaPredicted RBP20.3■□□□□ 0.84
PCDHA1-201ENST00000378133 SLC26A8Q96RN1 970 aa20.3■□□□□ 0.84
PCDHA1-201ENST00000378133 MAP7D2Q96T17 732 aa20.3■□□□□ 0.84
PCDHA1-201ENST00000378133 EID1Q9Y6B2 187 aa20.3■□□□□ 0.84
PCDHA1-201ENST00000378133 ZNF142P52746 1687 aaPredicted RBP20.29■□□□□ 0.84
PCDHA1-201ENST00000378133 CYP2E1P05181 493 aaPredicted RBP20.29■□□□□ 0.84
PCDHA1-201ENST00000378133 PKP1Q13835 747 aa20.29■□□□□ 0.84
PCDHA1-201ENST00000378133 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.29■□□□□ 0.84
PCDHA1-201ENST00000378133 HMMRO75330 724 aa20.28■□□□□ 0.84
PCDHA1-201ENST00000378133 PRPF40AO75400 957 aaKnown RBP20.28■□□□□ 0.84
PCDHA1-201ENST00000378133 USP31Q70CQ4 1352 aa20.28■□□□□ 0.84
PCDHA1-201ENST00000378133 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
PCDHA1-201ENST00000378133 UQCRHLA0A096LP55 91 aa20.26■□□□□ 0.83
PCDHA1-201ENST00000378133 UQCRHP07919 91 aa20.26■□□□□ 0.83
PCDHA1-201ENST00000378133 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
PCDHA1-201ENST00000378133 REC8O95072 547 aa20.26■□□□□ 0.83
PCDHA1-201ENST00000378133 PDE1AP54750 535 aa20.26■□□□□ 0.83
PCDHA1-201ENST00000378133 RBM27Q9P2N5 1060 aaKnown RBP20.26■□□□□ 0.83
PCDHA1-201ENST00000378133 EXOC6BQ9Y2D4 811 aa20.26■□□□□ 0.83
PCDHA1-201ENST00000378133 ZKSCAN5Q9Y2L8 839 aa20.26■□□□□ 0.83
PCDHA1-201ENST00000378133 RGPD1P0DJD0 1748 aa20.25■□□□□ 0.83
PCDHA1-201ENST00000378133 ST18O60284 1047 aa20.25■□□□□ 0.83
PCDHA1-201ENST00000378133 EYA1Q99502 592 aa20.25■□□□□ 0.83
PCDHA1-201ENST00000378133 ERC2O15083 957 aa20.25■□□□□ 0.83
PCDHA1-201ENST00000378133 AMPHP49418 695 aa20.25■□□□□ 0.83
PCDHA1-201ENST00000378133 ZGPATQ8N5A5 531 aaKnown RBP20.25■□□□□ 0.83
PCDHA1-201ENST00000378133 GPT2Q8TD30 523 aa20.25■□□□□ 0.83
PCDHA1-201ENST00000378133 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
PCDHA1-201ENST00000378133 TSHZ3Q63HK5 1081 aa20.24■□□□□ 0.83
PCDHA1-201ENST00000378133 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
PCDHA1-201ENST00000378133 CSPP1Q1MSJ5 1256 aa20.24■□□□□ 0.83
PCDHA1-201ENST00000378133 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
PCDHA1-201ENST00000378133 GNAI2P04899 355 aa20.23■□□□□ 0.83
PCDHA1-201ENST00000378133 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
PCDHA1-201ENST00000378133 NGDNQ8NEJ9 315 aaKnown RBP20.23■□□□□ 0.83
PCDHA1-201ENST00000378133 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
PCDHA1-201ENST00000378133 OSBPL3Q9H4L5 887 aa20.23■□□□□ 0.83
PCDHA1-201ENST00000378133 TOPAZ1Q8N9V7 1692 aa20.22■□□□□ 0.83
PCDHA1-201ENST00000378133 MCM5P33992 734 aa20.22■□□□□ 0.83
PCDHA1-201ENST00000378133 AMOTL2Q9Y2J4 779 aa20.22■□□□□ 0.83
PCDHA1-201ENST00000378133 NALCNQ8IZF0 1738 aa20.22■□□□□ 0.83
PCDHA1-201ENST00000378133 FLT4P35916 1363 aa20.21■□□□□ 0.83
PCDHA1-201ENST00000378133 LRSAM1Q6UWE0 723 aa20.21■□□□□ 0.83
PCDHA1-201ENST00000378133 SETD1BQ9UPS6 1966 aaKnown RBP20.21■□□□□ 0.83
PCDHA1-201ENST00000378133 TTC21AQ8NDW8 1320 aa20.21■□□□□ 0.83
PCDHA1-201ENST00000378133 SBNO1A3KN83 1393 aa20.2■□□□□ 0.83
PCDHA1-201ENST00000378133 FKBP5Q13451 457 aaPredicted RBP20.2■□□□□ 0.82
PCDHA1-201ENST00000378133 SYCE3A1L190 88 aa20.2■□□□□ 0.82
PCDHA1-201ENST00000378133 FLIIQ13045 1269 aa20.2■□□□□ 0.82
PCDHA1-201ENST00000378133 CCDC39Q9UFE4 941 aa20.2■□□□□ 0.82
PCDHA1-201ENST00000378133 DYNC1I1O14576 645 aa20.19■□□□□ 0.82
PCDHA1-201ENST00000378133 TMEM63CQ9P1W3 806 aa20.19■□□□□ 0.82
PCDHA1-201ENST00000378133 ZDHHC9Q9Y397 364 aa20.19■□□□□ 0.82
PCDHA1-201ENST00000378133 KDRP35968 1356 aa20.19■□□□□ 0.82
PCDHA1-201ENST00000378133 PNMA6EA0A0J9YXQ4 647 aa20.19■□□□□ 0.82
PCDHA1-201ENST00000378133 IGSF1Q8N6C5 1336 aa20.19■□□□□ 0.82
PCDHA1-201ENST00000378133 DIP2AQ14689 1571 aa20.19■□□□□ 0.82
PCDHA1-201ENST00000378133 BCL11BQ9C0K0 894 aaPredicted RBP20.18■□□□□ 0.82
PCDHA1-201ENST00000378133 MTERF4Q7Z6M4 381 aaKnown RBP20.18■□□□□ 0.82
PCDHA1-201ENST00000378133 LRRCC1Q9C099 1032 aa20.18■□□□□ 0.82
PCDHA1-201ENST00000378133 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
PCDHA1-201ENST00000378133 CCDC30Q5VVM6 783 aa20.18■□□□□ 0.82
PCDHA1-201ENST00000378133 NEK4P51957 841 aa20.17■□□□□ 0.82
PCDHA1-201ENST00000378133 NUTM2GQ5VZR2 741 aa20.17■□□□□ 0.82
PCDHA1-201ENST00000378133 CHAMP1Q96JM3 812 aa20.17■□□□□ 0.82
PCDHA1-201ENST00000378133 NLRP6P59044 892 aa20.17■□□□□ 0.82
PCDHA1-201ENST00000378133 NSFL1CQ9UNZ2 370 aaKnown RBP20.16■□□□□ 0.82
PCDHA1-201ENST00000378133 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
PCDHA1-201ENST00000378133 GNAI3P08754 354 aa20.16■□□□□ 0.82
PCDHA1-201ENST00000378133 ATP8B2P98198 1209 aa20.16■□□□□ 0.82
PCDHA1-201ENST00000378133 SASS6Q6UVJ0 657 aa20.16■□□□□ 0.82
PCDHA1-201ENST00000378133 RILPL2Q969X0 211 aa20.16■□□□□ 0.82
PCDHA1-201ENST00000378133 SALL3Q9BXA9 1300 aa20.15■□□□□ 0.82
PCDHA1-201ENST00000378133 MX1P20591 662 aa20.15■□□□□ 0.82
PCDHA1-201ENST00000378133 RNF214Q8ND24 703 aa20.15■□□□□ 0.82
PCDHA1-201ENST00000378133 ARID3AQ99856 593 aa20.15■□□□□ 0.82
PCDHA1-201ENST00000378133 TRIM6-TRIM34B2RNG4 842 aa20.15■□□□□ 0.82
PCDHA1-201ENST00000378133 FOXD4L5Q5VV16 416 aaPredicted RBP20.15■□□□□ 0.82
PCDHA1-201ENST00000378133 FOXD4L4Q8WXT5 416 aaPredicted RBP20.15■□□□□ 0.82
PCDHA1-201ENST00000378133 ESYT1Q9BSJ8 1104 aa20.15■□□□□ 0.82
PCDHA1-201ENST00000378133 FMN2Q9NZ56 1722 aa20.14■□□□□ 0.81
PCDHA1-201ENST00000378133 ANKLE2Q86XL3 938 aa20.14■□□□□ 0.81
PCDHA1-201ENST00000378133 IL17REQ8NFR9 667 aa20.14■□□□□ 0.81
PCDHA1-201ENST00000378133 LRRFIP2Q9Y608 721 aaKnown RBP20.14■□□□□ 0.81
PCDHA1-201ENST00000378133 HTATSF1O43719 755 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms