RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 FLIIQ13045 1269 aa24.97■■□□□ 1.59
CLN5-201ENST00000377453 FOXD4L6Q3SYB3 417 aaPredicted RBP24.97■■□□□ 1.59
CLN5-201ENST00000377453 FOXD4L3Q6VB84 417 aaPredicted RBP24.97■■□□□ 1.59
CLN5-201ENST00000377453 CLEC17AQ6ZS10 378 aa24.97■■□□□ 1.59
CLN5-201ENST00000377453 REC8O95072 547 aa24.97■■□□□ 1.59
CLN5-201ENST00000377453 TRIM6-TRIM34B2RNG4 842 aa24.96■■□□□ 1.59
CLN5-201ENST00000377453 NUCB2P80303 420 aa24.96■■□□□ 1.59
CLN5-201ENST00000377453 ISY1Q9ULR0 285 aaKnown RBP24.96■■□□□ 1.59
CLN5-201ENST00000377453 AMOTL2Q9Y2J4 779 aa24.96■■□□□ 1.59
CLN5-201ENST00000377453 USP31Q70CQ4 1352 aa24.96■■□□□ 1.59
CLN5-201ENST00000377453 CCT4P50991 539 aaKnown RBP24.96■■□□□ 1.59
CLN5-201ENST00000377453 GPT2Q8TD30 523 aa24.96■■□□□ 1.59
CLN5-201ENST00000377453 STK31Q9BXU1 1019 aa24.96■■□□□ 1.59
CLN5-201ENST00000377453 IL1RAPL2Q9NP60 686 aa24.96■■□□□ 1.59
CLN5-201ENST00000377453 LRRFIP2Q9Y608 721 aaKnown RBP24.96■■□□□ 1.59
CLN5-201ENST00000377453 MAP4K4O95819 1239 aaPredicted RBP24.95■■□□□ 1.58
CLN5-201ENST00000377453 ZSCAN23Q3MJ62 389 aa24.95■■□□□ 1.58
CLN5-201ENST00000377453 IL25Q9H293 177 aa24.95■■□□□ 1.58
CLN5-201ENST00000377453 ARHGEF10O15013 1369 aa24.94■■□□□ 1.58
CLN5-201ENST00000377453 RGPD1P0DJD0 1748 aa24.94■■□□□ 1.58
CLN5-201ENST00000377453 ANO2Q9NQ90 1003 aa24.93■■□□□ 1.58
CLN5-201ENST00000377453 PTMSP20962 102 aa24.93■■□□□ 1.58
CLN5-201ENST00000377453 NLRP6P59044 892 aa24.93■■□□□ 1.58
CLN5-201ENST00000377453 TMX3Q96JJ7 454 aa24.93■■□□□ 1.58
CLN5-201ENST00000377453 UPF3BQ9BZI7 483 aaKnown RBP24.92■■□□□ 1.58
CLN5-201ENST00000377453 LRRCC1Q9C099 1032 aa24.92■■□□□ 1.58
CLN5-201ENST00000377453 RBSNQ9H1K0 784 aa24.92■■□□□ 1.58
CLN5-201ENST00000377453 PLEKHG5O94827 1062 aa24.92■■□□□ 1.58
CLN5-201ENST00000377453 MX1P20591 662 aa24.92■■□□□ 1.58
CLN5-201ENST00000377453 ESYT1Q9BSJ8 1104 aa24.92■■□□□ 1.58
CLN5-201ENST00000377453 FLT4P35916 1363 aa24.92■■□□□ 1.58
CLN5-201ENST00000377453 SSH2Q76I76 1423 aa24.91■■□□□ 1.58
CLN5-201ENST00000377453 PRIM1P49642 420 aaKnown RBP24.91■■□□□ 1.58
CLN5-201ENST00000377453 NUTM1Q86Y26 1132 aa24.91■■□□□ 1.58
CLN5-201ENST00000377453 IL17REQ8NFR9 667 aa24.91■■□□□ 1.58
CLN5-201ENST00000377453 PHAXQ9H814 394 aaKnown RBP24.91■■□□□ 1.58
CLN5-201ENST00000377453 SALL3Q9BXA9 1300 aa24.9■■□□□ 1.58
CLN5-201ENST00000377453 DTNBO60941 627 aa24.9■■□□□ 1.58
CLN5-201ENST00000377453 OSBPL3Q9H4L5 887 aa24.9■■□□□ 1.58
CLN5-201ENST00000377453 IGSF1Q8N6C5 1336 aa24.9■■□□□ 1.58
CLN5-201ENST00000377453 SBNO1A3KN83 1393 aa24.9■■□□□ 1.58
CLN5-201ENST00000377453 TPRNQ4KMQ1 711 aa24.89■■□□□ 1.57
CLN5-201ENST00000377453 C14orf37Q86TY3 774 aa24.88■■□□□ 1.57
CLN5-201ENST00000377453 UBR1Q8IWV7 1749 aa24.88■■□□□ 1.57
CLN5-201ENST00000377453 TOPAZ1Q8N9V7 1692 aa24.88■■□□□ 1.57
CLN5-201ENST00000377453 CHMLP26374 656 aa24.88■■□□□ 1.57
CLN5-201ENST00000377453 TMEM63CQ9P1W3 806 aa24.87■■□□□ 1.57
CLN5-201ENST00000377453 RBM33Q96EV2 1170 aaKnown RBP24.87■■□□□ 1.57
CLN5-201ENST00000377453 LARP6Q9BRS8 491 aaKnown RBP24.87■■□□□ 1.57
CLN5-201ENST00000377453 CWC22Q9HCG8 908 aaKnown RBP24.87■■□□□ 1.57
CLN5-201ENST00000377453 GNAT3A8MTJ3 354 aa24.86■■□□□ 1.57
CLN5-201ENST00000377453 ATP8B2P98198 1209 aa24.86■■□□□ 1.57
CLN5-201ENST00000377453 CCDC30Q5VVM6 783 aa24.86■■□□□ 1.57
CLN5-201ENST00000377453 EIF2S2P20042 333 aaKnown RBP24.86■■□□□ 1.57
CLN5-201ENST00000377453 USP44Q9H0E7 712 aa24.86■■□□□ 1.57
CLN5-201ENST00000377453 NALCNQ8IZF0 1738 aa24.86■■□□□ 1.57
CLN5-201ENST00000377453 KDRP35968 1356 aa24.86■■□□□ 1.57
CLN5-201ENST00000377453 ZBTB7CA1YPR0 619 aa24.85■■□□□ 1.57
CLN5-201ENST00000377453 CCDC173Q0VFZ6 552 aa24.85■■□□□ 1.57
CLN5-201ENST00000377453 GDPD2Q9HCC8 539 aa24.85■■□□□ 1.57
CLN5-201ENST00000377453 SYCE3A1L190 88 aa24.85■■□□□ 1.57
CLN5-201ENST00000377453 ANXA1P04083 346 aa24.85■■□□□ 1.57
CLN5-201ENST00000377453 ZNF445P59923 1031 aa24.85■■□□□ 1.57
CLN5-201ENST00000377453 HOXC9P31274 260 aa24.84■■□□□ 1.57
CLN5-201ENST00000377453 PLEKHG1Q9ULL1 1385 aa24.84■■□□□ 1.57
CLN5-201ENST00000377453 PPP1R9BQ96SB3 815 aa24.84■■□□□ 1.57
CLN5-201ENST00000377453 IBTKQ9P2D0 1353 aaPredicted RBP24.83■■□□□ 1.57
CLN5-201ENST00000377453 GNAI3P08754 354 aa24.83■■□□□ 1.57
CLN5-201ENST00000377453 TTC21AQ8NDW8 1320 aa24.83■■□□□ 1.57
CLN5-201ENST00000377453 RGPD8O14715 1765 aaPredicted RBP24.82■■□□□ 1.56
CLN5-201ENST00000377453 RNF214Q8ND24 703 aa24.82■■□□□ 1.56
CLN5-201ENST00000377453 HDGFL1Q5TGJ6 251 aa24.82■■□□□ 1.56
CLN5-201ENST00000377453 UBTFL1P0CB47 393 aaPredicted RBP24.81■■□□□ 1.56
CLN5-201ENST00000377453 KCNQ3O43525 872 aa24.8■■□□□ 1.56
CLN5-201ENST00000377453 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
CLN5-201ENST00000377453 ANP32BQ92688 251 aaKnown RBP24.8■■□□□ 1.56
CLN5-201ENST00000377453 FMN2Q9NZ56 1722 aa24.79■■□□□ 1.56
CLN5-201ENST00000377453 SURF6O75683 361 aaKnown RBP24.79■■□□□ 1.56
CLN5-201ENST00000377453 PPP1R42Q7Z4L9 355 aa24.79■■□□□ 1.56
CLN5-201ENST00000377453 ABTB2Q8N961 1025 aa24.79■■□□□ 1.56
CLN5-201ENST00000377453 NBPF7P0C2Y1 421 aaPredicted RBP24.78■■□□□ 1.56
CLN5-201ENST00000377453 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
CLN5-201ENST00000377453 LGR6Q9HBX8 967 aa24.78■■□□□ 1.56
CLN5-201ENST00000377453 PIK3C2AO00443 1686 aa24.77■■□□□ 1.56
CLN5-201ENST00000377453 MAP3K5Q99683 1374 aa24.77■■□□□ 1.56
CLN5-201ENST00000377453 BRD1O95696 1058 aa24.76■■□□□ 1.55
CLN5-201ENST00000377453 GADD45BO75293 160 aaPredicted RBP24.76■■□□□ 1.55
CLN5-201ENST00000377453 MCCP23508 829 aa24.76■■□□□ 1.55
CLN5-201ENST00000377453 SOS1Q07889 1333 aaPredicted RBP24.75■■□□□ 1.55
CLN5-201ENST00000377453 KCNA6P17658 529 aa24.75■■□□□ 1.55
CLN5-201ENST00000377453 ZSCAN30Q86W11 494 aa24.75■■□□□ 1.55
CLN5-201ENST00000377453 CPA1P15085 419 aa24.75■■□□□ 1.55
CLN5-201ENST00000377453 XRN1Q8IZH2 1706 aaKnown RBP24.74■■□□□ 1.55
CLN5-201ENST00000377453 CHPF2Q9P2E5 772 aa24.74■■□□□ 1.55
CLN5-201ENST00000377453 STAP2Q9UGK3 403 aa24.74■■□□□ 1.55
CLN5-201ENST00000377453 DIP2AQ14689 1571 aa24.74■■□□□ 1.55
CLN5-201ENST00000377453 SRGAP3O43295 1099 aa24.74■■□□□ 1.55
CLN5-201ENST00000377453 CUL4AQ13619 759 aa24.74■■□□□ 1.55
CLN5-201ENST00000377453 FAM208AQ9UK61 1670 aaKnown RBP24.73■■□□□ 1.55
CLN5-201ENST00000377453 MPNDQ8N594 471 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms