RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 LTV1Q96GA3 475 aaPredicted RBP19.2■□□□□ 0.66
SSH3-203ENST00000376757 MX1P20591 662 aa19.2■□□□□ 0.66
SSH3-203ENST00000376757 EDC4Q6P2E9 1401 aaKnown RBP19.2■□□□□ 0.66
SSH3-203ENST00000376757 DNTTIP2Q5QJE6 756 aaKnown RBP19.2■□□□□ 0.66
SSH3-203ENST00000376757 LRRFIP2Q9Y608 721 aaKnown RBP19.2■□□□□ 0.66
SSH3-203ENST00000376757 IBTKQ9P2D0 1353 aaPredicted RBP19.19■□□□□ 0.66
SSH3-203ENST00000376757 PDLIM2Q96JY6 352 aa19.19■□□□□ 0.66
SSH3-203ENST00000376757 LRRCC1Q9C099 1032 aa19.19■□□□□ 0.66
SSH3-203ENST00000376757 ZKSCAN5Q9Y2L8 839 aa19.19■□□□□ 0.66
SSH3-203ENST00000376757 GNAI2P04899 355 aa19.18■□□□□ 0.66
SSH3-203ENST00000376757 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
SSH3-203ENST00000376757 CDC42BPGQ6DT37 1551 aa19.18■□□□□ 0.66
SSH3-203ENST00000376757 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
SSH3-203ENST00000376757 CHMLP26374 656 aa19.17■□□□□ 0.66
SSH3-203ENST00000376757 USP48Q86UV5 1035 aa19.17■□□□□ 0.66
SSH3-203ENST00000376757 USP25Q9UHP3 1055 aa19.17■□□□□ 0.66
SSH3-203ENST00000376757 ACEP12821 1306 aa19.16■□□□□ 0.66
SSH3-203ENST00000376757 BRD1O95696 1058 aa19.16■□□□□ 0.66
SSH3-203ENST00000376757 CPSF1Q10570 1443 aaKnown RBP19.16■□□□□ 0.66
SSH3-203ENST00000376757 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
SSH3-203ENST00000376757 PDCL3Q9H2J4 239 aa19.16■□□□□ 0.66
SSH3-203ENST00000376757 ARHGAP31Q2M1Z3 1444 aa19.16■□□□□ 0.66
SSH3-203ENST00000376757 CHMP3Q9Y3E7 222 aa19.16■□□□□ 0.66
SSH3-203ENST00000376757 ATP7BP35670 1465 aa19.16■□□□□ 0.66
SSH3-203ENST00000376757 STK31Q9BXU1 1019 aa19.15■□□□□ 0.66
SSH3-203ENST00000376757 PTPRCP08575 1304 aa19.15■□□□□ 0.66
SSH3-203ENST00000376757 PREX1Q8TCU6 1659 aa19.15■□□□□ 0.66
SSH3-203ENST00000376757 FLIIQ13045 1269 aa19.15■□□□□ 0.66
SSH3-203ENST00000376757 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
SSH3-203ENST00000376757 TSPY26PQ9H489 355 aa19.15■□□□□ 0.66
SSH3-203ENST00000376757 TTC12Q9H892 705 aaPredicted RBP19.15■□□□□ 0.66
SSH3-203ENST00000376757 CNPY2Q9Y2B0 182 aa19.15■□□□□ 0.66
SSH3-203ENST00000376757 PRDM10Q9NQV6 1147 aa19.14■□□□□ 0.66
SSH3-203ENST00000376757 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.14■□□□□ 0.66
SSH3-203ENST00000376757 FIBPO43427 364 aa19.14■□□□□ 0.65
SSH3-203ENST00000376757 TTC21BQ7Z4L5 1316 aa19.14■□□□□ 0.65
SSH3-203ENST00000376757 SPG7Q9UQ90 795 aa19.14■□□□□ 0.65
SSH3-203ENST00000376757 TCHHQ07283 1943 aa19.13■□□□□ 0.65
SSH3-203ENST00000376757 CLTCQ00610 1675 aaKnown RBP19.13■□□□□ 0.65
SSH3-203ENST00000376757 ANXA1P04083 346 aa19.13■□□□□ 0.65
SSH3-203ENST00000376757 EIF2S2P20042 333 aaKnown RBP19.13■□□□□ 0.65
SSH3-203ENST00000376757 MCCP23508 829 aa19.13■□□□□ 0.65
SSH3-203ENST00000376757 HCLS1P14317 486 aaPredicted RBP19.13■□□□□ 0.65
SSH3-203ENST00000376757 USHBP1Q8N6Y0 703 aa19.12■□□□□ 0.65
SSH3-203ENST00000376757 PHAXQ9H814 394 aaKnown RBP19.12■□□□□ 0.65
SSH3-203ENST00000376757 SLC26A8Q96RN1 970 aa19.12■□□□□ 0.65
SSH3-203ENST00000376757 SRCIN1Q9C0H9 1055 aa19.11■□□□□ 0.65
SSH3-203ENST00000376757 ZNF500O60304 480 aaPredicted RBP19.11■□□□□ 0.65
SSH3-203ENST00000376757 SURF6O75683 361 aaKnown RBP19.11■□□□□ 0.65
SSH3-203ENST00000376757 CCT4P50991 539 aaKnown RBP19.11■□□□□ 0.65
SSH3-203ENST00000376757 AATKQ6ZMQ8 1374 aa19.11■□□□□ 0.65
SSH3-203ENST00000376757 MBD3O95983 291 aa19.11■□□□□ 0.65
SSH3-203ENST00000376757 AMPHP49418 695 aa19.11■□□□□ 0.65
SSH3-203ENST00000376757 CWC27Q6UX04 472 aaKnown RBP19.11■□□□□ 0.65
SSH3-203ENST00000376757 CCDC39Q9UFE4 941 aa19.11■□□□□ 0.65
SSH3-203ENST00000376757 BCL11BQ9C0K0 894 aaPredicted RBP19.1■□□□□ 0.65
SSH3-203ENST00000376757 RASEFQ8IZ41 740 aa19.1■□□□□ 0.65
SSH3-203ENST00000376757 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
SSH3-203ENST00000376757 RIMS1Q86UR5 1692 aaKnown RBP19.09■□□□□ 0.65
SSH3-203ENST00000376757 HAP1P54257 671 aaPredicted RBP19.09■□□□□ 0.65
SSH3-203ENST00000376757 FAM69CQ0P6D2 419 aa19.09■□□□□ 0.65
SSH3-203ENST00000376757 EYA1Q99502 592 aa19.09■□□□□ 0.65
SSH3-203ENST00000376757 OSBPL3Q9H4L5 887 aa19.08■□□□□ 0.65
SSH3-203ENST00000376757 GIMAP6Q6P9H5 292 aa19.08■□□□□ 0.64
SSH3-203ENST00000376757 A2ML1A8K2U0 1454 aa19.08■□□□□ 0.64
SSH3-203ENST00000376757 CRB1P82279 1406 aa19.08■□□□□ 0.64
SSH3-203ENST00000376757 CUL4AQ13619 759 aa19.08■□□□□ 0.64
SSH3-203ENST00000376757 LARGE1O95461 756 aa19.07■□□□□ 0.64
SSH3-203ENST00000376757 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
SSH3-203ENST00000376757 UBTFL1P0CB47 393 aaPredicted RBP19.07■□□□□ 0.64
SSH3-203ENST00000376757 USP44Q9H0E7 712 aa19.07■□□□□ 0.64
SSH3-203ENST00000376757 SALL3Q9BXA9 1300 aa19.07■□□□□ 0.64
SSH3-203ENST00000376757 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
SSH3-203ENST00000376757 SPC24Q8NBT2 197 aa19.06■□□□□ 0.64
SSH3-203ENST00000376757 KIAA0232Q92628 1395 aa19.06■□□□□ 0.64
SSH3-203ENST00000376757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.06■□□□□ 0.64
SSH3-203ENST00000376757 ATP8B2P98198 1209 aa19.06■□□□□ 0.64
SSH3-203ENST00000376757 HS1BP3Q53T59 392 aa19.06■□□□□ 0.64
SSH3-203ENST00000376757 ROBO2Q9HCK4 1378 aa19.06■□□□□ 0.64
SSH3-203ENST00000376757 ADCY5O95622 1261 aa19.05■□□□□ 0.64
SSH3-203ENST00000376757 AK2P54819 239 aa19.05■□□□□ 0.64
SSH3-203ENST00000376757 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
SSH3-203ENST00000376757 COL9A3Q14050 684 aaPredicted RBP19.05■□□□□ 0.64
SSH3-203ENST00000376757 FAM173BQ6P4H8 233 aa19.05■□□□□ 0.64
SSH3-203ENST00000376757 SRGAP3O43295 1099 aa19.05■□□□□ 0.64
SSH3-203ENST00000376757 KIAA2012Q0VF49 1180 aa19.05■□□□□ 0.64
SSH3-203ENST00000376757 CCDC83Q8IWF9 413 aa19.05■□□□□ 0.64
SSH3-203ENST00000376757 TCEANC2Q96MN5 208 aa19.05■□□□□ 0.64
SSH3-203ENST00000376757 NBPF7P0C2Y1 421 aaPredicted RBP19.04■□□□□ 0.64
SSH3-203ENST00000376757 GNAI3P08754 354 aa19.04■□□□□ 0.64
SSH3-203ENST00000376757 FERMT3Q86UX7 667 aa19.04■□□□□ 0.64
SSH3-203ENST00000376757 NGDNQ8NEJ9 315 aaKnown RBP19.04■□□□□ 0.64
SSH3-203ENST00000376757 OS9Q13438 667 aaPredicted RBP19.03■□□□□ 0.64
SSH3-203ENST00000376757 NEO1Q92859 1461 aa19.03■□□□□ 0.64
SSH3-203ENST00000376757 VPS37CA5D8V6 355 aaPredicted RBP19.03■□□□□ 0.64
SSH3-203ENST00000376757 CASTP20810 708 aaKnown RBP19.03■□□□□ 0.64
SSH3-203ENST00000376757 SYT1P21579 422 aa19.03■□□□□ 0.64
SSH3-203ENST00000376757 NECAB1Q8N987 351 aa19.03■□□□□ 0.64
SSH3-203ENST00000376757 SYAP1Q96A49 352 aaPredicted RBP19.03■□□□□ 0.64
SSH3-203ENST00000376757 SNX14Q9Y5W7 946 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms