RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 LRRC59Q96AG4 307 aaKnown RBP15.21■□□□□ 0.03
UBR4-203ENST00000375225 TSPYL4Q9UJ04 414 aa15.21■□□□□ 0.03
UBR4-203ENST00000375225 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
UBR4-203ENST00000375225 MCM10Q7L590 875 aa15.2■□□□□ 0.02
UBR4-203ENST00000375225 STK31Q9BXU1 1019 aa15.2■□□□□ 0.02
UBR4-203ENST00000375225 DCTPP1Q9H773 170 aa15.2■□□□□ 0.02
UBR4-203ENST00000375225 COL22A1Q8NFW1 1626 aaPredicted RBP15.19■□□□□ 0.02
UBR4-203ENST00000375225 ANKRD44Q8N8A2 993 aa15.19■□□□□ 0.02
UBR4-203ENST00000375225 SNX21Q969T3 373 aa15.19■□□□□ 0.02
UBR4-203ENST00000375225 CHMP5Q9NZZ3 219 aa15.19■□□□□ 0.02
UBR4-203ENST00000375225 ERBB3P21860 1342 aa15.19■□□□□ 0.02
UBR4-203ENST00000375225 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
UBR4-203ENST00000375225 LMO7Q8WWI1 1683 aa15.18■□□□□ 0.02
UBR4-203ENST00000375225 CDC45O75419 566 aa15.18■□□□□ 0.02
UBR4-203ENST00000375225 CACNA1FO60840 1977 aa15.18■□□□□ 0.02
UBR4-203ENST00000375225 GNAT3A8MTJ3 354 aa15.17■□□□□ 0.02
UBR4-203ENST00000375225 FRAT2O75474 233 aaPredicted RBP15.17■□□□□ 0.02
UBR4-203ENST00000375225 NBPF6Q5VWK0 638 aa15.17■□□□□ 0.02
UBR4-203ENST00000375225 NBPF4Q96M43 638 aa15.17■□□□□ 0.02
UBR4-203ENST00000375225 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
UBR4-203ENST00000375225 C1orf115Q9H7X2 142 aa15.17■□□□□ 0.02
UBR4-203ENST00000375225 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
UBR4-203ENST00000375225 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
UBR4-203ENST00000375225 CCDC30Q5VVM6 783 aa15.17■□□□□ 0.02
UBR4-203ENST00000375225 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
UBR4-203ENST00000375225 AXIN2Q9Y2T1 843 aa15.17■□□□□ 0.02
UBR4-203ENST00000375225 LRRC37A3O60309 1634 aa15.16■□□□□ 0.02
UBR4-203ENST00000375225 COL16A1Q07092 1604 aaPredicted RBP15.16■□□□□ 0.02
UBR4-203ENST00000375225 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
UBR4-203ENST00000375225 CSB-PGBD3P0DP91 1061 aa15.16■□□□□ 0.02
UBR4-203ENST00000375225 PTMSP20962 102 aa15.16■□□□□ 0.02
UBR4-203ENST00000375225 ANTXR1Q9H6X2 564 aa15.16■□□□□ 0.02
UBR4-203ENST00000375225 CHRNA2Q15822 529 aa15.15■□□□□ 0.02
UBR4-203ENST00000375225 MAP3K5Q99683 1374 aa15.15■□□□□ 0.02
UBR4-203ENST00000375225 SIRT2Q8IXJ6 389 aa15.14■□□□□ 0.01
UBR4-203ENST00000375225 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
UBR4-203ENST00000375225 RGS12O14924 1447 aa15.14■□□□□ 0.01
UBR4-203ENST00000375225 PLEKHG2Q9H7P9 1386 aa15.13■□□□□ 0.01
UBR4-203ENST00000375225 UBAP1LF5GYI3 381 aa15.13■□□□□ 0.01
UBR4-203ENST00000375225 GNAI3P08754 354 aa15.13■□□□□ 0.01
UBR4-203ENST00000375225 AMOTQ4VCS5 1084 aa15.13■□□□□ 0.01
UBR4-203ENST00000375225 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
UBR4-203ENST00000375225 NLRP2Q9NX02 1062 aa15.13■□□□□ 0.01
UBR4-203ENST00000375225 COL14A1Q05707 1796 aaKnown RBP15.13■□□□□ 0.01
UBR4-203ENST00000375225 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
UBR4-203ENST00000375225 PIP4K2BP78356 416 aa15.12■□□□□ 0.01
UBR4-203ENST00000375225 PLEKHO1Q53GL0 409 aaPredicted RBP15.12■□□□□ 0.01
UBR4-203ENST00000375225 ATP10DQ9P241 1426 aa15.12■□□□□ 0.01
UBR4-203ENST00000375225 TTC22Q5TAA0 569 aa15.12■□□□□ 0.01
UBR4-203ENST00000375225 TBC1D9Q6ZT07 1266 aa15.12■□□□□ 0.01
UBR4-203ENST00000375225 PXDNLA1KZ92 1463 aa15.11■□□□□ 0.01
UBR4-203ENST00000375225 DDX11L8A8MPP1 907 aa15.11■□□□□ 0.01
UBR4-203ENST00000375225 GNAI2P04899 355 aa15.11■□□□□ 0.01
UBR4-203ENST00000375225 TAF7Q15545 349 aaPredicted RBP15.11■□□□□ 0.01
UBR4-203ENST00000375225 L1TD1Q5T7N2 865 aaKnown RBP15.11■□□□□ 0.01
UBR4-203ENST00000375225 PLEKHM2Q8IWE5 1019 aa15.11■□□□□ 0.01
UBR4-203ENST00000375225 RAPGEF4Q8WZA2 1011 aa15.11■□□□□ 0.01
UBR4-203ENST00000375225 COL5A2P05997 1499 aaPredicted RBP15.1■□□□□ 0.01
UBR4-203ENST00000375225 PARP4Q9UKK3 1724 aaKnown RBP15.1■□□□□ 0.01
UBR4-203ENST00000375225 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
UBR4-203ENST00000375225 HSP90AA1P07900 732 aaKnown RBP15.09■□□□□ 0.01
UBR4-203ENST00000375225 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
UBR4-203ENST00000375225 N4BP2Q86UW6 1770 aaPredicted RBP15.09■□□□□ 0.01
UBR4-203ENST00000375225 HOXB7P09629 217 aa15.08■□□□□ 0.01
UBR4-203ENST00000375225 KRT24Q2M2I5 525 aa15.08■□□□□ 0.01
UBR4-203ENST00000375225 C1orf141Q5JVX7 400 aa15.08■□□□□ 0.01
UBR4-203ENST00000375225 ZNF530Q6P9A1 599 aaPredicted RBP15.08■□□□□ 0.01
UBR4-203ENST00000375225 SLC4A10Q6U841 1118 aa15.08■□□□□ 0.01
UBR4-203ENST00000375225 REC8O95072 547 aa15.07■□□□□ 0
UBR4-203ENST00000375225 RABEP1Q15276 862 aa15.07■□□□□ 0
UBR4-203ENST00000375225 AKAP4Q5JQC9 854 aa15.07■□□□□ 0
UBR4-203ENST00000375225 GBP4Q96PP9 640 aa15.07■□□□□ 0
UBR4-203ENST00000375225 MEIS3Q99687 375 aa15.07■□□□□ 0
UBR4-203ENST00000375225 PKD1L3Q7Z443 1732 aa15.07■□□□□ 0
UBR4-203ENST00000375225 MCM4P33991 863 aa15.07■□□□□ 0
UBR4-203ENST00000375225 EVA1CP58658 441 aa15.07■□□□□ 0
UBR4-203ENST00000375225 FLIIQ13045 1269 aa15.07■□□□□ 0
UBR4-203ENST00000375225 FKBP5Q13451 457 aaPredicted RBP15.07■□□□□ 0
UBR4-203ENST00000375225 TOM1L2Q6ZVM7 507 aa15.07■□□□□ 0
UBR4-203ENST00000375225 CERKQ8TCT0 537 aa15.07■□□□□ 0
UBR4-203ENST00000375225 OVOS2A0A0G2JMS6 1433 aa15.06■□□□□ 0
UBR4-203ENST00000375225 K7ELQ4 463 aaPredicted RBP15.06■□□□□ 0
UBR4-203ENST00000375225 IL27Q8NEV9 243 aa15.06■□□□□ 0
UBR4-203ENST00000375225 SRCIN1Q9C0H9 1055 aa15.06■□□□□ 0
UBR4-203ENST00000375225 SPG7Q9UQ90 795 aa15.06■□□□□ 0
UBR4-203ENST00000375225 PLCH1Q4KWH8 1693 aa15.05■□□□□ -0
UBR4-203ENST00000375225 MEGF6O75095 1541 aa15.05■□□□□ -0
UBR4-203ENST00000375225 KCNA4P22459 653 aa15.05■□□□□ -0
UBR4-203ENST00000375225 OSBPL3Q9H4L5 887 aa15.05■□□□□ -0
UBR4-203ENST00000375225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.05■□□□□ -05e-14■□□□□ 10.1
UBR4-203ENST00000375225 MIS18AQ9NYP9 233 aa15.05■□□□□ -0
UBR4-203ENST00000375225 HDAC5Q9UQL6 1122 aa15.05■□□□□ -0
UBR4-203ENST00000375225 GSPT1P15170 499 aaKnown RBP15.04■□□□□ -0
UBR4-203ENST00000375225 CARD10Q9BWT7 1032 aa15.03■□□□□ -0
UBR4-203ENST00000375225 STRN4Q9NRL3 753 aa15.03■□□□□ -0
UBR4-203ENST00000375225 CEMIPQ8WUJ3 1361 aa15.03■□□□□ -0
UBR4-203ENST00000375225 ADAMTS7Q9UKP4 1686 aa15.03■□□□□ -0
UBR4-203ENST00000375225 GOLGA6L22H0YM25 854 aa15.02■□□□□ -0
UBR4-203ENST00000375225 SKOR2Q2VWA4 1001 aaPredicted RBP15.02■□□□□ -0
UBR4-203ENST00000375225 HDGFL1Q5TGJ6 251 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms