RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 ATP6V1AP38606 617 aa20.26■□□□□ 0.83
C9orf16-201ENST00000372994 CABP4P57796 275 aa20.26■□□□□ 0.83
C9orf16-201ENST00000372994 ITPK1Q13572 414 aa20.26■□□□□ 0.83
C9orf16-201ENST00000372994 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
C9orf16-201ENST00000372994 LINC00116Q8NCU8 138 aa20.26■□□□□ 0.83
C9orf16-201ENST00000372994 AK7Q96M32 723 aa20.26■□□□□ 0.83
C9orf16-201ENST00000372994 DCAF8L1A6NGE4 600 aa20.25■□□□□ 0.83
C9orf16-201ENST00000372994 UTRNP46939 3433 aa20.25■□□□□ 0.83
C9orf16-201ENST00000372994 UBR3Q6ZT12 1888 aa20.24■□□□□ 0.83
C9orf16-201ENST00000372994 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
C9orf16-201ENST00000372994 NFATC2IPQ8NCF5 419 aa20.24■□□□□ 0.83
C9orf16-201ENST00000372994 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
C9orf16-201ENST00000372994 ZNF831Q5JPB2 1677 aa20.23■□□□□ 0.83
C9orf16-201ENST00000372994 SLC4A9Q96Q91 983 aa20.23■□□□□ 0.83
C9orf16-201ENST00000372994 SSFA2P28290 1259 aa20.22■□□□□ 0.83
C9orf16-201ENST00000372994 MTHFSDQ2M296 383 aaKnown RBP20.22■□□□□ 0.83
C9orf16-201ENST00000372994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.21■□□□□ 0.83
C9orf16-201ENST00000372994 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
C9orf16-201ENST00000372994 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
C9orf16-201ENST00000372994 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
C9orf16-201ENST00000372994 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
C9orf16-201ENST00000372994 LGR6Q9HBX8 967 aa20.2■□□□□ 0.82
C9orf16-201ENST00000372994 GOLGB1Q14789 3259 aaKnown RBP20.19■□□□□ 0.82
C9orf16-201ENST00000372994 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
C9orf16-201ENST00000372994 SLC52A2Q9HAB3 445 aa20.19■□□□□ 0.82
C9orf16-201ENST00000372994 GNPATO15228 680 aa20.18■□□□□ 0.82
C9orf16-201ENST00000372994 RNMTO43148 476 aaKnown RBP20.18■□□□□ 0.82
C9orf16-201ENST00000372994 PHF14O94880 888 aa20.18■□□□□ 0.82
C9orf16-201ENST00000372994 RC3H1Q5TC82 1133 aaKnown RBP20.18■□□□□ 0.82
C9orf16-201ENST00000372994 MSL1Q68DK7 614 aa20.18■□□□□ 0.82
C9orf16-201ENST00000372994 PTCD1O75127 700 aaKnown RBP20.17■□□□□ 0.82
C9orf16-201ENST00000372994 ADAMTS7Q9UKP4 1686 aa20.16■□□□□ 0.82
C9orf16-201ENST00000372994 VIRMAQ69YN4 1812 aaKnown RBP20.16■□□□□ 0.82
C9orf16-201ENST00000372994 COL5A3P25940 1745 aaPredicted RBP20.16■□□□□ 0.82
C9orf16-201ENST00000372994 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
C9orf16-201ENST00000372994 RTCBQ9Y3I0 505 aaKnown RBP20.15■□□□□ 0.82
C9orf16-201ENST00000372994 CNTNAP4Q9C0A0 1308 aa20.15■□□□□ 0.82
C9orf16-201ENST00000372994 MRC1P22897 1456 aa20.15■□□□□ 0.82
C9orf16-201ENST00000372994 MYH14Q7Z406 1995 aaKnown RBP20.14■□□□□ 0.81
C9orf16-201ENST00000372994 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
C9orf16-201ENST00000372994 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
C9orf16-201ENST00000372994 TRAPPC3LQ5T215 181 aa20.13■□□□□ 0.81
C9orf16-201ENST00000372994 KLHL34Q8N239 644 aa20.13■□□□□ 0.81
C9orf16-201ENST00000372994 ADRA2BP18089 450 aa20.12■□□□□ 0.81
C9orf16-201ENST00000372994 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
C9orf16-201ENST00000372994 GNAT3A8MTJ3 354 aa20.11■□□□□ 0.81
C9orf16-201ENST00000372994 YY1P25490 414 aa20.11■□□□□ 0.81
C9orf16-201ENST00000372994 NLGN2Q8NFZ4 835 aa20.11■□□□□ 0.81
C9orf16-201ENST00000372994 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
C9orf16-201ENST00000372994 CD2APQ9Y5K6 639 aa20.11■□□□□ 0.81
C9orf16-201ENST00000372994 CICQ96RK0 1608 aaPredicted RBP20.11■□□□□ 0.81
C9orf16-201ENST00000372994 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
C9orf16-201ENST00000372994 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
C9orf16-201ENST00000372994 IL17REQ8NFR9 667 aa20.1■□□□□ 0.81
C9orf16-201ENST00000372994 ARHGEF1Q92888 912 aaKnown RBP20.1■□□□□ 0.81
C9orf16-201ENST00000372994 FCHSD2O94868 740 aa20.09■□□□□ 0.81
C9orf16-201ENST00000372994 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
C9orf16-201ENST00000372994 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
C9orf16-201ENST00000372994 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
C9orf16-201ENST00000372994 TJP1Q07157 1748 aa20.08■□□□□ 0.81
C9orf16-201ENST00000372994 GPR162Q16538 588 aa20.08■□□□□ 0.81
C9orf16-201ENST00000372994 RFC4P35249 363 aa20.07■□□□□ 0.8
C9orf16-201ENST00000372994 INTS5Q6P9B9 1019 aaKnown RBP20.07■□□□□ 0.8
C9orf16-201ENST00000372994 DNAJC10Q8IXB1 793 aa20.07■□□□□ 0.8
C9orf16-201ENST00000372994 VSIG10Q8N0Z9 540 aa20.07■□□□□ 0.8
C9orf16-201ENST00000372994 NLGN1Q8N2Q7 840 aa20.07■□□□□ 0.8
C9orf16-201ENST00000372994 TEFQ10587 303 aa20.06■□□□□ 0.8
C9orf16-201ENST00000372994 KCPQ6ZWJ8 1503 aa20.06■□□□□ 0.8
C9orf16-201ENST00000372994 CEMIPQ8WUJ3 1361 aa20.06■□□□□ 0.8
C9orf16-201ENST00000372994 CHD4Q14839 1912 aa20.06■□□□□ 0.8
C9orf16-201ENST00000372994 UBR2Q8IWV8 1755 aa20.04■□□□□ 0.8
C9orf16-201ENST00000372994 MMP10P09238 476 aa20.04■□□□□ 0.8
C9orf16-201ENST00000372994 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
C9orf16-201ENST00000372994 GYS1P13807 737 aa20.04■□□□□ 0.8
C9orf16-201ENST00000372994 SIPA1L3O60292 1781 aaPredicted RBP20.03■□□□□ 0.8
C9orf16-201ENST00000372994 CCDC87Q9NVE4 849 aa20.03■□□□□ 0.8
C9orf16-201ENST00000372994 C4AP0C0L4 1744 aa20.02■□□□□ 0.8
C9orf16-201ENST00000372994 ZNF790Q6PG37 636 aa20.02■□□□□ 0.8
C9orf16-201ENST00000372994 TTC5Q8N0Z6 440 aa20.02■□□□□ 0.8
C9orf16-201ENST00000372994 DDX10Q13206 875 aaKnown RBP20.01■□□□□ 0.79
C9orf16-201ENST00000372994 RALBP1Q15311 655 aa20.01■□□□□ 0.79
C9orf16-201ENST00000372994 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
C9orf16-201ENST00000372994 USP42Q9H9J4 1324 aaKnown RBP20.01■□□□□ 0.79
C9orf16-201ENST00000372994 YBX3P16989 372 aaKnown RBP eCLIP20■□□□□ 0.792e-9■■■□□ 14.8
C9orf16-201ENST00000372994 ZNF496Q96IT1 587 aaPredicted RBP20■□□□□ 0.79
C9orf16-201ENST00000372994 SOS1Q07889 1333 aaPredicted RBP20■□□□□ 0.79
C9orf16-201ENST00000372994 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
C9orf16-201ENST00000372994 GRIN3BO60391 1043 aa19.99■□□□□ 0.79
C9orf16-201ENST00000372994 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
C9orf16-201ENST00000372994 TEX13AQ9BXU3 409 aaPredicted RBP19.98■□□□□ 0.79
C9orf16-201ENST00000372994 SRP68Q9UHB9 627 aaKnown RBP19.98■□□□□ 0.79
C9orf16-201ENST00000372994 HEG1Q9ULI3 1381 aa19.97■□□□□ 0.79
C9orf16-201ENST00000372994 BTBD11A6QL63 1104 aa19.97■□□□□ 0.79
C9orf16-201ENST00000372994 STARD3NLO95772 234 aa19.97■□□□□ 0.79
C9orf16-201ENST00000372994 PLEKHF1Q96S99 279 aa19.97■□□□□ 0.79
C9orf16-201ENST00000372994 ZBTB1Q9Y2K1 713 aa19.97■□□□□ 0.79
C9orf16-201ENST00000372994 KIF13BQ9NQT8 1826 aa19.97■□□□□ 0.79
C9orf16-201ENST00000372994 FKBP8Q14318 412 aa19.96■□□□□ 0.79
C9orf16-201ENST00000372994 MCM10Q7L590 875 aa19.96■□□□□ 0.79
C9orf16-201ENST00000372994 PARP3Q9Y6F1 533 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms