RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 G2E3Q7L622 706 aa22.31■■□□□ 1.16
CD40-201ENST00000372276 OVOS2A0A0G2JMS6 1433 aa22.3■■□□□ 1.16
CD40-201ENST00000372276 DDIT3P35638 169 aa22.3■■□□□ 1.16
CD40-201ENST00000372276 ATP8B2P98198 1209 aa22.3■■□□□ 1.16
CD40-201ENST00000372276 PLEKHO1Q53GL0 409 aaPredicted RBP22.3■■□□□ 1.16
CD40-201ENST00000372276 L1TD1Q5T7N2 865 aaKnown RBP22.3■■□□□ 1.16
CD40-201ENST00000372276 NUTM2GQ5VZR2 741 aa22.3■■□□□ 1.16
CD40-201ENST00000372276 LTBP4Q8N2S1 1624 aa22.3■■□□□ 1.16
CD40-201ENST00000372276 NCAPD2Q15021 1401 aa22.3■■□□□ 1.16
CD40-201ENST00000372276 K7ELQ4 463 aaPredicted RBP22.29■■□□□ 1.16
CD40-201ENST00000372276 KIF2CQ99661 725 aa22.29■■□□□ 1.16
CD40-201ENST00000372276 SRCIN1Q9C0H9 1055 aa22.29■■□□□ 1.16
CD40-201ENST00000372276 ESCO1Q5FWF5 840 aa22.28■■□□□ 1.16
CD40-201ENST00000372276 MED1Q15648 1581 aaPredicted RBP22.28■■□□□ 1.16
CD40-201ENST00000372276 AKAP4Q5JQC9 854 aa22.28■■□□□ 1.16
CD40-201ENST00000372276 LTV1Q96GA3 475 aaPredicted RBP22.28■■□□□ 1.16
CD40-201ENST00000372276 GBP4Q96PP9 640 aa22.27■■□□□ 1.16
CD40-201ENST00000372276 HDAC5Q9UQL6 1122 aa22.27■■□□□ 1.16
CD40-201ENST00000372276 HSP90AA1P07900 732 aaKnown RBP22.26■■□□□ 1.15
CD40-201ENST00000372276 HDGFL1Q5TGJ6 251 aa22.26■■□□□ 1.15
CD40-201ENST00000372276 LRRCC1Q9C099 1032 aa22.26■■□□□ 1.15
CD40-201ENST00000372276 LMO7Q8WWI1 1683 aa22.26■■□□□ 1.15
CD40-201ENST00000372276 SLIT3O75094 1523 aa22.26■■□□□ 1.15
CD40-201ENST00000372276 F6X3S4 739 aa22.25■■□□□ 1.15
CD40-201ENST00000372276 SDSP20132 328 aa22.25■■□□□ 1.15
CD40-201ENST00000372276 USP26Q9BXU7 913 aa22.25■■□□□ 1.15
CD40-201ENST00000372276 AOX1Q06278 1338 aa22.25■■□□□ 1.15
CD40-201ENST00000372276 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
CD40-201ENST00000372276 C16orf71Q8IYS4 520 aaPredicted RBP22.24■■□□□ 1.15
CD40-201ENST00000372276 KIF1AQ12756 1690 aa22.24■■□□□ 1.15
CD40-201ENST00000372276 MST1RQ04912 1400 aa22.23■■□□□ 1.15
CD40-201ENST00000372276 ERC2O15083 957 aa22.23■■□□□ 1.15
CD40-201ENST00000372276 EPB41L2O43491 1005 aaKnown RBP22.23■■□□□ 1.15
CD40-201ENST00000372276 PDE1AP54750 535 aa22.23■■□□□ 1.15
CD40-201ENST00000372276 SKOR2Q2VWA4 1001 aaPredicted RBP22.23■■□□□ 1.15
CD40-201ENST00000372276 NBPF6Q5VWK0 638 aa22.23■■□□□ 1.15
CD40-201ENST00000372276 NBPF4Q96M43 638 aa22.23■■□□□ 1.15
CD40-201ENST00000372276 ISY1Q9ULR0 285 aaKnown RBP22.23■■□□□ 1.15
CD40-201ENST00000372276 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
CD40-201ENST00000372276 UBTFL1P0CB47 393 aaPredicted RBP22.22■■□□□ 1.15
CD40-201ENST00000372276 SPRYD3Q8NCJ5 442 aa22.22■■□□□ 1.15
CD40-201ENST00000372276 EIF4A1P60842 406 aaKnown RBP22.21■■□□□ 1.15
CD40-201ENST00000372276 TEFQ10587 303 aa22.21■■□□□ 1.15
CD40-201ENST00000372276 ARHGEF25Q86VW2 580 aa22.21■■□□□ 1.15
CD40-201ENST00000372276 CERKQ8TCT0 537 aa22.21■■□□□ 1.15
CD40-201ENST00000372276 IBTKQ9P2D0 1353 aaPredicted RBP22.21■■□□□ 1.15
CD40-201ENST00000372276 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.15
CD40-201ENST00000372276 ST18O60284 1047 aa22.2■■□□□ 1.15
CD40-201ENST00000372276 RAB3GAP1Q15042 981 aa22.2■■□□□ 1.15
CD40-201ENST00000372276 STAP2Q9UGK3 403 aa22.2■■□□□ 1.15
CD40-201ENST00000372276 GCP02774 474 aa22.2■■□□□ 1.14
CD40-201ENST00000372276 C1orf141Q5JVX7 400 aa22.2■■□□□ 1.14
CD40-201ENST00000372276 STRCP1A6NGW2 1772 aa22.19■■□□□ 1.14
CD40-201ENST00000372276 SMARCA5O60264 1052 aaPredicted RBP22.19■■□□□ 1.14
CD40-201ENST00000372276 HSP90AB4PQ58FF6 505 aa22.19■■□□□ 1.14
CD40-201ENST00000372276 CWC22Q9HCG8 908 aaKnown RBP22.19■■□□□ 1.14
CD40-201ENST00000372276 SALL3Q9BXA9 1300 aa22.18■■□□□ 1.14
CD40-201ENST00000372276 ZNF530Q6P9A1 599 aaPredicted RBP22.18■■□□□ 1.14
CD40-201ENST00000372276 SSH3Q8TE77 659 aa22.18■■□□□ 1.14
CD40-201ENST00000372276 USP44Q9H0E7 712 aa22.18■■□□□ 1.14
CD40-201ENST00000372276 MCCP23508 829 aa22.17■■□□□ 1.14
CD40-201ENST00000372276 CLEC17AQ6ZS10 378 aa22.17■■□□□ 1.14
CD40-201ENST00000372276 CAMTA1Q9Y6Y1 1673 aa22.17■■□□□ 1.14
CD40-201ENST00000372276 TRAK2O60296 914 aa22.17■■□□□ 1.14
CD40-201ENST00000372276 MX1P20591 662 aa22.17■■□□□ 1.14
CD40-201ENST00000372276 MCM2P49736 904 aa22.17■■□□□ 1.14
CD40-201ENST00000372276 USHBP1Q8N6Y0 703 aa22.17■■□□□ 1.14
CD40-201ENST00000372276 OTUD7AQ8TE49 926 aaPredicted RBP22.17■■□□□ 1.14
CD40-201ENST00000372276 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
CD40-201ENST00000372276 GOLGA6L22H0YM25 854 aa22.16■■□□□ 1.14
CD40-201ENST00000372276 NUCB2P80303 420 aa22.16■■□□□ 1.14
CD40-201ENST00000372276 APBB1O00213 710 aa22.15■■□□□ 1.14
CD40-201ENST00000372276 DBF4Q9UBU7 674 aaPredicted RBP22.15■■□□□ 1.14
CD40-201ENST00000372276 LRRFIP2Q9Y608 721 aaKnown RBP22.15■■□□□ 1.14
CD40-201ENST00000372276 RNMTO43148 476 aaKnown RBP22.14■■□□□ 1.14
CD40-201ENST00000372276 DNAAF4Q8WXU2 420 aa22.14■■□□□ 1.14
CD40-201ENST00000372276 C19orf44Q9H6X5 657 aa22.14■■□□□ 1.14
CD40-201ENST00000372276 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.13
CD40-201ENST00000372276 ANAPC15P60006 121 aa22.13■■□□□ 1.13
CD40-201ENST00000372276 POLA2Q14181 598 aa22.13■■□□□ 1.13
CD40-201ENST00000372276 TNPO1Q92973 898 aaKnown RBP22.13■■□□□ 1.13
CD40-201ENST00000372276 EXOC6BQ9Y2D4 811 aa22.13■■□□□ 1.13
CD40-201ENST00000372276 ALDH1L1O75891 902 aa22.13■■□□□ 1.13
CD40-201ENST00000372276 KRT28Q7Z3Y7 464 aa22.13■■□□□ 1.13
CD40-201ENST00000372276 ANKRD24Q8TF21 1146 aa22.13■■□□□ 1.13
CD40-201ENST00000372276 PNMA6EA0A0J9YXQ4 647 aa22.12■■□□□ 1.13
CD40-201ENST00000372276 PROSER2Q86WR7 435 aaPredicted RBP22.12■■□□□ 1.13
CD40-201ENST00000372276 NECTIN2Q92692 538 aa22.12■■□□□ 1.13
CD40-201ENST00000372276 LGR6Q9HBX8 967 aa22.12■■□□□ 1.13
CD40-201ENST00000372276 GOLGA6L3A6NEY3 463 aa22.11■■□□□ 1.13
CD40-201ENST00000372276 TUBGCP6Q96RT7 1819 aa22.11■■□□□ 1.13
CD40-201ENST00000372276 ABCC6O95255 1503 aa22.11■■□□□ 1.13
CD40-201ENST00000372276 BEND3Q5T5X7 828 aa22.1■■□□□ 1.13
CD40-201ENST00000372276 KIF1BPQ96EK5 621 aa22.1■■□□□ 1.13
CD40-201ENST00000372276 IL17RAQ96F46 866 aa22.1■■□□□ 1.13
CD40-201ENST00000372276 ORAI2Q96SN7 254 aa22.1■■□□□ 1.13
CD40-201ENST00000372276 C1orf167Q5SNV9 1468 aa22.1■■□□□ 1.13
CD40-201ENST00000372276 HEG1Q9ULI3 1381 aa22.1■■□□□ 1.13
CD40-201ENST00000372276 EIF2S2P20042 333 aaKnown RBP22.09■■□□□ 1.13
CD40-201ENST00000372276 ESYT1Q9BSJ8 1104 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms