RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 OSBPL3Q9H4L5 887 aa28.11■■■□□ 2.09
BRD3-202ENST00000371834 NWD1Q149M9 1564 aa28.11■■■□□ 2.09
BRD3-202ENST00000371834 LRRC37A3O60309 1634 aa28.11■■■□□ 2.09
BRD3-202ENST00000371834 GAS2L3Q86XJ1 694 aa28.1■■■□□ 2.09
BRD3-202ENST00000371834 ERC2O15083 957 aa28.09■■■□□ 2.09
BRD3-202ENST00000371834 REC8O95072 547 aa28.09■■■□□ 2.09
BRD3-202ENST00000371834 MARF1Q9Y4F3 1742 aaKnown RBP28.09■■■□□ 2.09
BRD3-202ENST00000371834 FAM208AQ9UK61 1670 aaKnown RBP28.09■■■□□ 2.09
BRD3-202ENST00000371834 C14orf37Q86TY3 774 aa28.09■■■□□ 2.09
BRD3-202ENST00000371834 MAP3K5Q99683 1374 aa28.08■■■□□ 2.09
BRD3-202ENST00000371834 SKOR2Q2VWA4 1001 aaPredicted RBP28.08■■■□□ 2.09
BRD3-202ENST00000371834 XRN1Q8IZH2 1706 aaKnown RBP28.08■■■□□ 2.09
BRD3-202ENST00000371834 BAG4O95429 457 aaKnown RBP28.08■■■□□ 2.08
BRD3-202ENST00000371834 GNAI3P08754 354 aa28.07■■■□□ 2.08
BRD3-202ENST00000371834 ANKARQ7Z5J8 1434 aa28.07■■■□□ 2.08
BRD3-202ENST00000371834 PKP1Q13835 747 aa28.07■■■□□ 2.08
BRD3-202ENST00000371834 LRRCC1Q9C099 1032 aa28.07■■■□□ 2.08
BRD3-202ENST00000371834 SALL3Q9BXA9 1300 aa28.06■■■□□ 2.08
BRD3-202ENST00000371834 TAF7Q15545 349 aaPredicted RBP28.06■■■□□ 2.08
BRD3-202ENST00000371834 LRRFIP2Q9Y608 721 aaKnown RBP28.06■■■□□ 2.08
BRD3-202ENST00000371834 ATP8B2P98198 1209 aa28.05■■■□□ 2.08
BRD3-202ENST00000371834 CLEC17AQ6ZS10 378 aa28.05■■■□□ 2.08
BRD3-202ENST00000371834 ST18O60284 1047 aa28.04■■■□□ 2.08
BRD3-202ENST00000371834 PTMSP20962 102 aa28.04■■■□□ 2.08
BRD3-202ENST00000371834 ZGPATQ8N5A5 531 aaKnown RBP28.04■■■□□ 2.08
BRD3-202ENST00000371834 MX1P20591 662 aa28.02■■■□□ 2.08
BRD3-202ENST00000371834 GOLGA6L22H0YM25 854 aa28.02■■■□□ 2.08
BRD3-202ENST00000371834 RBM33Q96EV2 1170 aaKnown RBP28.02■■■□□ 2.08
BRD3-202ENST00000371834 PHAXQ9H814 394 aaKnown RBP28.02■■■□□ 2.08
BRD3-202ENST00000371834 FER1L4A9Z1Z3 1794 aa28.02■■■□□ 2.08
BRD3-202ENST00000371834 USP44Q9H0E7 712 aa28.01■■■□□ 2.08
BRD3-202ENST00000371834 IBTKQ9P2D0 1353 aaPredicted RBP28.01■■■□□ 2.07
BRD3-202ENST00000371834 HDGFL1Q5TGJ6 251 aa28■■■□□ 2.07
BRD3-202ENST00000371834 ISY1Q9ULR0 285 aaKnown RBP28■■■□□ 2.07
BRD3-202ENST00000371834 CYP2E1P05181 493 aaPredicted RBP28■■■□□ 2.07
BRD3-202ENST00000371834 NUCB2P80303 420 aa28■■■□□ 2.07
BRD3-202ENST00000371834 MCTP1Q6DN14 999 aa27.99■■■□□ 2.07
BRD3-202ENST00000371834 RILPL2Q969X0 211 aa27.99■■■□□ 2.07
BRD3-202ENST00000371834 ESYT1Q9BSJ8 1104 aa27.99■■■□□ 2.07
BRD3-202ENST00000371834 DDX49Q9Y6V7 483 aaKnown RBP27.99■■■□□ 2.07
BRD3-202ENST00000371834 TRIM6-TRIM34B2RNG4 842 aa27.98■■■□□ 2.07
BRD3-202ENST00000371834 UBTFL1P0CB47 393 aaPredicted RBP27.96■■■□□ 2.07
BRD3-202ENST00000371834 PHF8Q9UPP1 1060 aa27.96■■■□□ 2.07
BRD3-202ENST00000371834 EIF2S2P20042 333 aaKnown RBP27.96■■■□□ 2.07
BRD3-202ENST00000371834 UNC5CLQ8IV45 518 aa27.96■■■□□ 2.07
BRD3-202ENST00000371834 IL1RAPL2Q9NP60 686 aa27.96■■■□□ 2.07
BRD3-202ENST00000371834 BABAM1Q9NWV8 329 aa27.96■■■□□ 2.07
BRD3-202ENST00000371834 ZBTB7CA1YPR0 619 aa27.95■■■□□ 2.07
BRD3-202ENST00000371834 NEK4P51957 841 aa27.95■■■□□ 2.07
BRD3-202ENST00000371834 KLHL40Q2TBA0 621 aa27.95■■■□□ 2.07
BRD3-202ENST00000371834 LGR6Q9HBX8 967 aa27.95■■■□□ 2.07
BRD3-202ENST00000371834 CWC22Q9HCG8 908 aaKnown RBP27.95■■■□□ 2.07
BRD3-202ENST00000371834 TUBGCP6Q96RT7 1819 aa27.95■■■□□ 2.06
BRD3-202ENST00000371834 NBPF6Q5VWK0 638 aa27.95■■■□□ 2.06
BRD3-202ENST00000371834 NBPF4Q96M43 638 aa27.95■■■□□ 2.06
BRD3-202ENST00000371834 SOS1Q07889 1333 aaPredicted RBP27.95■■■□□ 2.06
BRD3-202ENST00000371834 CHMLP26374 656 aa27.94■■■□□ 2.06
BRD3-202ENST00000371834 PALD1Q9ULE6 856 aa27.94■■■□□ 2.06
BRD3-202ENST00000371834 USP54Q70EL1 1684 aa27.94■■■□□ 2.06
BRD3-202ENST00000371834 ZDHHC9Q9Y397 364 aa27.93■■■□□ 2.06
BRD3-202ENST00000371834 CACNA1FO60840 1977 aa27.93■■■□□ 2.06
BRD3-202ENST00000371834 STAP2Q9UGK3 403 aa27.93■■■□□ 2.06
BRD3-202ENST00000371834 IP6K1Q92551 441 aa27.92■■■□□ 2.06
BRD3-202ENST00000371834 ANO2Q9NQ90 1003 aa27.92■■■□□ 2.06
BRD3-202ENST00000371834 SETD1BQ9UPS6 1966 aaKnown RBP27.92■■■□□ 2.06
BRD3-202ENST00000371834 LTN1O94822 1766 aa27.92■■■□□ 2.06
BRD3-202ENST00000371834 PXDNLA1KZ92 1463 aa27.92■■■□□ 2.06
BRD3-202ENST00000371834 NUTM1Q86Y26 1132 aa27.91■■■□□ 2.06
BRD3-202ENST00000371834 KCNQ3O43525 872 aa27.91■■■□□ 2.06
BRD3-202ENST00000371834 CHAMP1Q96JM3 812 aa27.91■■■□□ 2.06
BRD3-202ENST00000371834 LMBRD1Q9NUN5 540 aa27.91■■■□□ 2.06
BRD3-202ENST00000371834 CEMIPQ8WUJ3 1361 aa27.91■■■□□ 2.06
BRD3-202ENST00000371834 PPP1R42Q7Z4L9 355 aa27.9■■■□□ 2.06
BRD3-202ENST00000371834 SSH3Q8TE77 659 aa27.9■■■□□ 2.06
BRD3-202ENST00000371834 TMX3Q96JJ7 454 aa27.9■■■□□ 2.06
BRD3-202ENST00000371834 NCLP19338 710 aaKnown RBP27.89■■■□□ 2.06
BRD3-202ENST00000371834 EIF4A1P60842 406 aaKnown RBP27.89■■■□□ 2.06
BRD3-202ENST00000371834 SRCIN1Q9C0H9 1055 aa27.89■■■□□ 2.06
BRD3-202ENST00000371834 N4BP2Q86UW6 1770 aaPredicted RBP27.89■■■□□ 2.06
BRD3-202ENST00000371834 CHPF2Q9P2E5 772 aa27.89■■■□□ 2.06
BRD3-202ENST00000371834 PLEKHG5O94827 1062 aa27.88■■■□□ 2.05
BRD3-202ENST00000371834 IL25Q9H293 177 aa27.88■■■□□ 2.05
BRD3-202ENST00000371834 SURF6O75683 361 aaKnown RBP27.88■■■□□ 2.05
BRD3-202ENST00000371834 ANXA1P04083 346 aa27.87■■■□□ 2.05
BRD3-202ENST00000371834 NBPF7P0C2Y1 421 aaPredicted RBP27.87■■■□□ 2.05
BRD3-202ENST00000371834 FOXD4L5Q5VV16 416 aaPredicted RBP27.87■■■□□ 2.05
BRD3-202ENST00000371834 NOL8Q76FK4 1167 aaKnown RBP27.87■■■□□ 2.05
BRD3-202ENST00000371834 FOXD4L4Q8WXT5 416 aaPredicted RBP27.87■■■□□ 2.05
BRD3-202ENST00000371834 LRRC59Q96AG4 307 aaKnown RBP27.87■■■□□ 2.05
BRD3-202ENST00000371834 MAP4K4O95819 1239 aaPredicted RBP27.87■■■□□ 2.05
BRD3-202ENST00000371834 CAVIN1Q6NZI2 390 aaKnown RBP27.86■■■□□ 2.05
BRD3-202ENST00000371834 PRPF40AO75400 957 aaKnown RBP27.86■■■□□ 2.05
BRD3-202ENST00000371834 MCCP23508 829 aa27.86■■■□□ 2.05
BRD3-202ENST00000371834 NFAT5O94916 1531 aa27.85■■■□□ 2.05
BRD3-202ENST00000371834 PI4KAP2A4QPH2 592 aa27.85■■■□□ 2.05
BRD3-202ENST00000371834 PSME1Q06323 249 aa27.85■■■□□ 2.05
BRD3-202ENST00000371834 ESCO1Q5FWF5 840 aa27.85■■■□□ 2.05
BRD3-202ENST00000371834 PI4KAP1Q8N8J0 262 aa27.85■■■□□ 2.05
BRD3-202ENST00000371834 SRGAP3O43295 1099 aa27.84■■■□□ 2.05
BRD3-202ENST00000371834 POLA2Q14181 598 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms