RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 ITPK1Q13572 414 aa23.16■■□□□ 1.3
LRRC42-202ENST00000371368 LINC00116Q8NCU8 138 aa23.16■■□□□ 1.3
LRRC42-202ENST00000371368 DIAPH1O60610 1272 aaKnown RBP23.15■■□□□ 1.3
LRRC42-202ENST00000371368 KLHL34Q8N239 644 aa23.15■■□□□ 1.3
LRRC42-202ENST00000371368 KDM6AO15550 1401 aaPredicted RBP23.15■■□□□ 1.3
LRRC42-202ENST00000371368 YY1P25490 414 aa23.14■■□□□ 1.29
LRRC42-202ENST00000371368 MSL1Q68DK7 614 aa23.14■■□□□ 1.29
LRRC42-202ENST00000371368 HMOX1P09601 288 aa23.13■■□□□ 1.29
LRRC42-202ENST00000371368 SMIM5Q71RC9 77 aa23.13■■□□□ 1.29
LRRC42-202ENST00000371368 AMIGO3Q86WK7 504 aa23.13■■□□□ 1.29
LRRC42-202ENST00000371368 RBM42Q9BTD8 480 aaKnown RBP23.12■■□□□ 1.29
LRRC42-202ENST00000371368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.11■■□□□ 1.29
LRRC42-202ENST00000371368 PHF14O94880 888 aa23.11■■□□□ 1.29
LRRC42-202ENST00000371368 NFATC2IPQ8NCF5 419 aa23.11■■□□□ 1.29
LRRC42-202ENST00000371368 SLC4A9Q96Q91 983 aa23.11■■□□□ 1.29
LRRC42-202ENST00000371368 SSFA2P28290 1259 aa23.1■■□□□ 1.29
LRRC42-202ENST00000371368 UBR3Q6ZT12 1888 aa23.09■■□□□ 1.29
LRRC42-202ENST00000371368 AKAP4Q5JQC9 854 aa23.09■■□□□ 1.29
LRRC42-202ENST00000371368 GNPATO15228 680 aa23.08■■□□□ 1.29
LRRC42-202ENST00000371368 NLGN2Q8NFZ4 835 aa23.06■■□□□ 1.28
LRRC42-202ENST00000371368 U2SURPO15042 1029 aaKnown RBP23.05■■□□□ 1.28
LRRC42-202ENST00000371368 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
LRRC42-202ENST00000371368 GPR162Q16538 588 aa23.05■■□□□ 1.28
LRRC42-202ENST00000371368 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
LRRC42-202ENST00000371368 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
LRRC42-202ENST00000371368 LGR6Q9HBX8 967 aa23.05■■□□□ 1.28
LRRC42-202ENST00000371368 ZNF831Q5JPB2 1677 aa23.05■■□□□ 1.28
LRRC42-202ENST00000371368 COL3A1P02461 1466 aaPredicted RBP23.05■■□□□ 1.28
LRRC42-202ENST00000371368 RNMTO43148 476 aaKnown RBP23.03■■□□□ 1.28
LRRC42-202ENST00000371368 RTCBQ9Y3I0 505 aaKnown RBP23.03■■□□□ 1.28
LRRC42-202ENST00000371368 SCN11AQ9UI33 1791 aa23.03■■□□□ 1.28
LRRC42-202ENST00000371368 TRAPPC3LQ5T215 181 aa23.02■■□□□ 1.28
LRRC42-202ENST00000371368 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
LRRC42-202ENST00000371368 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
LRRC42-202ENST00000371368 CD2APQ9Y5K6 639 aa23.01■■□□□ 1.27
LRRC42-202ENST00000371368 CFAP53Q96M91 514 aa23■■□□□ 1.27
LRRC42-202ENST00000371368 CNTNAP4Q9C0A0 1308 aa23■■□□□ 1.27
LRRC42-202ENST00000371368 RPS6KA4O75676 772 aa22.99■■□□□ 1.27
LRRC42-202ENST00000371368 ARHGEF1Q92888 912 aaKnown RBP22.98■■□□□ 1.27
LRRC42-202ENST00000371368 COL5A3P25940 1745 aaPredicted RBP22.98■■□□□ 1.27
LRRC42-202ENST00000371368 PPP2R1AP30153 589 aa22.97■■□□□ 1.27
LRRC42-202ENST00000371368 ADRA2BP18089 450 aa22.96■■□□□ 1.27
LRRC42-202ENST00000371368 CRKLP46109 303 aaKnown RBP22.95■■□□□ 1.26
LRRC42-202ENST00000371368 SLC39A6Q13433 755 aa22.95■■□□□ 1.26
LRRC42-202ENST00000371368 MRC1P22897 1456 aa22.94■■□□□ 1.26
LRRC42-202ENST00000371368 RFC4P35249 363 aa22.94■■□□□ 1.26
LRRC42-202ENST00000371368 NLGN1Q8N2Q7 840 aa22.94■■□□□ 1.26
LRRC42-202ENST00000371368 GAS2L2Q8NHY3 880 aa22.94■■□□□ 1.26
LRRC42-202ENST00000371368 NUDCQ9Y266 331 aa22.94■■□□□ 1.26
LRRC42-202ENST00000371368 ADAMTS7Q9UKP4 1686 aa22.93■■□□□ 1.26
LRRC42-202ENST00000371368 MYH14Q7Z406 1995 aaKnown RBP22.93■■□□□ 1.26
LRRC42-202ENST00000371368 GNAT3A8MTJ3 354 aa22.93■■□□□ 1.26
LRRC42-202ENST00000371368 YBX3P16989 372 aaKnown RBP eCLIP22.93■■□□□ 1.265e-8■□□□□ 10.5
LRRC42-202ENST00000371368 CHD4Q14839 1912 aa22.92■■□□□ 1.26
LRRC42-202ENST00000371368 VIRMAQ69YN4 1812 aaKnown RBP22.92■■□□□ 1.26
LRRC42-202ENST00000371368 TJP1Q07157 1748 aa22.92■■□□□ 1.26
LRRC42-202ENST00000371368 MMP10P09238 476 aa22.92■■□□□ 1.26
LRRC42-202ENST00000371368 INTS5Q6P9B9 1019 aaKnown RBP22.92■■□□□ 1.26
LRRC42-202ENST00000371368 DNAJC10Q8IXB1 793 aa22.92■■□□□ 1.26
LRRC42-202ENST00000371368 PHACTR3Q96KR7 559 aa22.92■■□□□ 1.26
LRRC42-202ENST00000371368 GRIN3BO60391 1043 aa22.91■■□□□ 1.26
LRRC42-202ENST00000371368 GYS1P13807 737 aa22.91■■□□□ 1.26
LRRC42-202ENST00000371368 PRKAR2BP31323 418 aa22.91■■□□□ 1.26
LRRC42-202ENST00000371368 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
LRRC42-202ENST00000371368 RSPH6AQ9H0K4 717 aa22.91■■□□□ 1.26
LRRC42-202ENST00000371368 CICQ96RK0 1608 aaPredicted RBP22.9■■□□□ 1.26
LRRC42-202ENST00000371368 U2AF1L5P0DN76 240 aaPredicted RBP22.89■■□□□ 1.25
LRRC42-202ENST00000371368 U2AF1Q01081 240 aaKnown RBP eCLIP22.89■■□□□ 1.25
LRRC42-202ENST00000371368 TEFQ10587 303 aa22.89■■□□□ 1.25
LRRC42-202ENST00000371368 ZNF784Q8NCA9 323 aaPredicted RBP22.89■■□□□ 1.25
LRRC42-202ENST00000371368 CCDC87Q9NVE4 849 aa22.89■■□□□ 1.25
LRRC42-202ENST00000371368 CYP19A1P11511 503 aaPredicted RBP22.88■■□□□ 1.25
LRRC42-202ENST00000371368 KCPQ6ZWJ8 1503 aa22.87■■□□□ 1.25
LRRC42-202ENST00000371368 VSIG10Q8N0Z9 540 aa22.87■■□□□ 1.25
LRRC42-202ENST00000371368 SRP68Q9UHB9 627 aaKnown RBP22.87■■□□□ 1.25
LRRC42-202ENST00000371368 UTRNP46939 3433 aa22.86■■□□□ 1.25
LRRC42-202ENST00000371368 FCHSD2O94868 740 aa22.86■■□□□ 1.25
LRRC42-202ENST00000371368 TTC5Q8N0Z6 440 aa22.86■■□□□ 1.25
LRRC42-202ENST00000371368 PARP3Q9Y6F1 533 aa22.85■■□□□ 1.25
LRRC42-202ENST00000371368 C4AP0C0L4 1744 aa22.85■■□□□ 1.25
LRRC42-202ENST00000371368 USP42Q9H9J4 1324 aaKnown RBP22.83■■□□□ 1.25
LRRC42-202ENST00000371368 ZNF790Q6PG37 636 aa22.83■■□□□ 1.25
LRRC42-202ENST00000371368 SOS1Q07889 1333 aaPredicted RBP22.82■■□□□ 1.24
LRRC42-202ENST00000371368 FKBP8Q14318 412 aa22.82■■□□□ 1.24
LRRC42-202ENST00000371368 ZNF496Q96IT1 587 aaPredicted RBP22.82■■□□□ 1.24
LRRC42-202ENST00000371368 WWC3Q9ULE0 1092 aa22.82■■□□□ 1.24
LRRC42-202ENST00000371368 UBR2Q8IWV8 1755 aa22.81■■□□□ 1.24
LRRC42-202ENST00000371368 CEMIPQ8WUJ3 1361 aa22.81■■□□□ 1.24
LRRC42-202ENST00000371368 ZPR1O75312 459 aa22.81■■□□□ 1.24
LRRC42-202ENST00000371368 TGFB2P61812 414 aa22.81■■□□□ 1.24
LRRC42-202ENST00000371368 ZBTB1Q9Y2K1 713 aa22.81■■□□□ 1.24
LRRC42-202ENST00000371368 STARD3NLO95772 234 aa22.8■■□□□ 1.24
LRRC42-202ENST00000371368 SIPA1L3O60292 1781 aaPredicted RBP22.79■■□□□ 1.24
LRRC42-202ENST00000371368 USPL1Q5W0Q7 1092 aa22.79■■□□□ 1.24
LRRC42-202ENST00000371368 RTF1Q92541 710 aaKnown RBP22.79■■□□□ 1.24
LRRC42-202ENST00000371368 TEX13AQ9BXU3 409 aaPredicted RBP22.79■■□□□ 1.24
LRRC42-202ENST00000371368 KIF13BQ9NQT8 1826 aa22.79■■□□□ 1.24
LRRC42-202ENST00000371368 HEG1Q9ULI3 1381 aa22.78■■□□□ 1.24
LRRC42-202ENST00000371368 A0A0G2JLW4 131 aa22.78■■□□□ 1.24
LRRC42-202ENST00000371368 BTBD11A6QL63 1104 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms