RNA–Protein interactions for RNA: ENST00000371180.6

TM2D1-204, Transcript of TM2 domain containing 1, humanhuman

TSL 5 BASIC

Gene TM2D1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-204ENST00000371180 UBR2Q8IWV8 1755 aa23.37■■□□□ 1.33
TM2D1-204ENST00000371180 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
TM2D1-204ENST00000371180 MYH14Q7Z406 1995 aaKnown RBP23.36■■□□□ 1.33
TM2D1-204ENST00000371180 DIAPH1O60610 1272 aaKnown RBP23.36■■□□□ 1.33
TM2D1-204ENST00000371180 HMGB2P26583 209 aaKnown RBP23.36■■□□□ 1.33
TM2D1-204ENST00000371180 ASAP1Q9ULH1 1129 aa23.36■■□□□ 1.33
TM2D1-204ENST00000371180 GPR162Q16538 588 aa23.35■■□□□ 1.33
TM2D1-204ENST00000371180 DCAF5Q96JK2 942 aa23.35■■□□□ 1.33
TM2D1-204ENST00000371180 SMARCC1Q92922 1105 aaPredicted RBP23.34■■□□□ 1.33
TM2D1-204ENST00000371180 AMIGO3Q86WK7 504 aa23.33■■□□□ 1.33
TM2D1-204ENST00000371180 UTRNP46939 3433 aa23.33■■□□□ 1.33
TM2D1-204ENST00000371180 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
TM2D1-204ENST00000371180 ATG3Q9NT62 314 aa23.32■■□□□ 1.32
TM2D1-204ENST00000371180 LOC102724428A0A0B4J2F2 783 aa23.31■■□□□ 1.32
TM2D1-204ENST00000371180 ERVV-2B6SEH9 535 aa23.31■■□□□ 1.32
TM2D1-204ENST00000371180 PPP2R1AP30153 589 aa23.31■■□□□ 1.32
TM2D1-204ENST00000371180 SIK1P57059 783 aa23.31■■□□□ 1.32
TM2D1-204ENST00000371180 C1orf141Q5JVX7 400 aa23.31■■□□□ 1.32
TM2D1-204ENST00000371180 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
TM2D1-204ENST00000371180 GOLGB1Q14789 3259 aaKnown RBP23.3■■□□□ 1.32
TM2D1-204ENST00000371180 MAP3K5Q99683 1374 aa23.3■■□□□ 1.32
TM2D1-204ENST00000371180 ITPK1Q13572 414 aa23.3■■□□□ 1.32
TM2D1-204ENST00000371180 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
TM2D1-204ENST00000371180 DLG5Q8TDM6 1919 aa23.29■■□□□ 1.32
TM2D1-204ENST00000371180 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
TM2D1-204ENST00000371180 SLC4A9Q96Q91 983 aa23.28■■□□□ 1.32
TM2D1-204ENST00000371180 U2SURPO15042 1029 aaKnown RBP23.27■■□□□ 1.32
TM2D1-204ENST00000371180 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
TM2D1-204ENST00000371180 ZNF784Q8NCA9 323 aaPredicted RBP23.27■■□□□ 1.32
TM2D1-204ENST00000371180 MTHFSDQ2M296 383 aaKnown RBP23.26■■□□□ 1.31
TM2D1-204ENST00000371180 AKAP4Q5JQC9 854 aa23.26■■□□□ 1.31
TM2D1-204ENST00000371180 CABP4P57796 275 aa23.25■■□□□ 1.31
TM2D1-204ENST00000371180 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
TM2D1-204ENST00000371180 FLAD1Q8NFF5 587 aa23.24■■□□□ 1.31
TM2D1-204ENST00000371180 AK7Q96M32 723 aa23.23■■□□□ 1.31
TM2D1-204ENST00000371180 ATP6V1AP38606 617 aa23.22■■□□□ 1.31
TM2D1-204ENST00000371180 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
TM2D1-204ENST00000371180 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
TM2D1-204ENST00000371180 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
TM2D1-204ENST00000371180 MSL1Q68DK7 614 aa23.21■■□□□ 1.31
TM2D1-204ENST00000371180 NFATC2IPQ8NCF5 419 aa23.21■■□□□ 1.31
TM2D1-204ENST00000371180 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
TM2D1-204ENST00000371180 PHF14O94880 888 aa23.2■■□□□ 1.3
TM2D1-204ENST00000371180 SLC52A2Q9HAB3 445 aa23.2■■□□□ 1.3
TM2D1-204ENST00000371180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.19■■□□□ 1.3
TM2D1-204ENST00000371180 RBM42Q9BTD8 480 aaKnown RBP23.19■■□□□ 1.3
TM2D1-204ENST00000371180 KIF13BQ9NQT8 1826 aa23.18■■□□□ 1.3
TM2D1-204ENST00000371180 GNPATO15228 680 aa23.18■■□□□ 1.3
TM2D1-204ENST00000371180 PRKAR2BP31323 418 aa23.18■■□□□ 1.3
TM2D1-204ENST00000371180 NLGN2Q8NFZ4 835 aa23.18■■□□□ 1.3
TM2D1-204ENST00000371180 KIAA1551Q9HCM1 1747 aa23.17■■□□□ 1.3
TM2D1-204ENST00000371180 CNTNAP4Q9C0A0 1308 aa23.17■■□□□ 1.3
TM2D1-204ENST00000371180 SSFA2P28290 1259 aa23.17■■□□□ 1.3
TM2D1-204ENST00000371180 PHACTR3Q96KR7 559 aa23.17■■□□□ 1.3
TM2D1-204ENST00000371180 CHD4Q14839 1912 aa23.17■■□□□ 1.3
TM2D1-204ENST00000371180 GRIN3BO60391 1043 aa23.16■■□□□ 1.3
TM2D1-204ENST00000371180 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
TM2D1-204ENST00000371180 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.3
TM2D1-204ENST00000371180 GAS2L2Q8NHY3 880 aa23.14■■□□□ 1.29
TM2D1-204ENST00000371180 U2AF1L5P0DN76 240 aaPredicted RBP23.13■■□□□ 1.29
TM2D1-204ENST00000371180 U2AF1Q01081 240 aaKnown RBP eCLIP23.13■■□□□ 1.29
TM2D1-204ENST00000371180 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
TM2D1-204ENST00000371180 DDX10Q13206 875 aaKnown RBP23.12■■□□□ 1.29
TM2D1-204ENST00000371180 SLC39A6Q13433 755 aa23.12■■□□□ 1.29
TM2D1-204ENST00000371180 PIAS4Q8N2W9 510 aaPredicted RBP23.11■■□□□ 1.29
TM2D1-204ENST00000371180 IL17REQ8NFR9 667 aa23.11■■□□□ 1.29
TM2D1-204ENST00000371180 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
TM2D1-204ENST00000371180 SCN7AQ01118 1682 aa23.1■■□□□ 1.29
TM2D1-204ENST00000371180 GNAT3A8MTJ3 354 aa23.1■■□□□ 1.29
TM2D1-204ENST00000371180 CD2APQ9Y5K6 639 aa23.1■■□□□ 1.29
TM2D1-204ENST00000371180 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
TM2D1-204ENST00000371180 CRKLP46109 303 aaKnown RBP23.09■■□□□ 1.29
TM2D1-204ENST00000371180 RC3H1Q5TC82 1133 aaKnown RBP23.09■■□□□ 1.29
TM2D1-204ENST00000371180 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
TM2D1-204ENST00000371180 FCHSD2O94868 740 aa23.07■■□□□ 1.28
TM2D1-204ENST00000371180 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
TM2D1-204ENST00000371180 N4BP2Q86UW6 1770 aaPredicted RBP23.06■■□□□ 1.28
TM2D1-204ENST00000371180 GIGYF1O75420 1035 aaPredicted RBP23.06■■□□□ 1.28
TM2D1-204ENST00000371180 YBX3P16989 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
TM2D1-204ENST00000371180 C1QTNF8P60827 252 aa23.06■■□□□ 1.28
TM2D1-204ENST00000371180 DNAJC10Q8IXB1 793 aa23.06■■□□□ 1.28
TM2D1-204ENST00000371180 BCORQ6W2J9 1755 aa23.06■■□□□ 1.28
TM2D1-204ENST00000371180 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
TM2D1-204ENST00000371180 SENP3-EIF4A1A0A087X0R7 540 aa23.05■■□□□ 1.28
TM2D1-204ENST00000371180 RPS6KA4O75676 772 aa23.05■■□□□ 1.28
TM2D1-204ENST00000371180 ADRA2BP18089 450 aa23.04■■□□□ 1.28
TM2D1-204ENST00000371180 INTS5Q6P9B9 1019 aaKnown RBP23.04■■□□□ 1.28
TM2D1-204ENST00000371180 TEFQ10587 303 aa23.03■■□□□ 1.28
TM2D1-204ENST00000371180 RALBP1Q15311 655 aa23.03■■□□□ 1.28
TM2D1-204ENST00000371180 ARHGEF1Q92888 912 aaKnown RBP23.03■■□□□ 1.28
TM2D1-204ENST00000371180 CYP19A1P11511 503 aaPredicted RBP23.02■■□□□ 1.28
TM2D1-204ENST00000371180 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
TM2D1-204ENST00000371180 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
TM2D1-204ENST00000371180 HEG1Q9ULI3 1381 aa23.01■■□□□ 1.27
TM2D1-204ENST00000371180 PLEKHF1Q96S99 279 aa23.01■■□□□ 1.27
TM2D1-204ENST00000371180 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
TM2D1-204ENST00000371180 SOS1Q07889 1333 aaPredicted RBP23.01■■□□□ 1.27
TM2D1-204ENST00000371180 C10orf71Q711Q0 1435 aa23■■□□□ 1.27
TM2D1-204ENST00000371180 GYS1P13807 737 aa23■■□□□ 1.27
TM2D1-204ENST00000371180 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms