RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 CHPF2Q9P2E5 772 aa8.51□□□□□ -1.05
LRRC39-202ENST00000370137 TBC1D2BQ9UPU7 963 aa8.51□□□□□ -1.05
LRRC39-202ENST00000370137 TLL2Q9Y6L7 1015 aa8.51□□□□□ -1.05
LRRC39-202ENST00000370137 U2SURPO15042 1029 aaKnown RBP8.5□□□□□ -1.05
LRRC39-202ENST00000370137 LMOD1P29536 600 aaPredicted RBP8.5□□□□□ -1.05
LRRC39-202ENST00000370137 TSNAXIP1Q2TAA8 658 aa8.5□□□□□ -1.05
LRRC39-202ENST00000370137 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
LRRC39-202ENST00000370137 ZFYVE27Q5T4F4 411 aa8.5□□□□□ -1.05
LRRC39-202ENST00000370137 LRRN4Q8WUT4 740 aa8.5□□□□□ -1.05
LRRC39-202ENST00000370137 ANKRD33BA6NCL7 494 aa8.49□□□□□ -1.05
LRRC39-202ENST00000370137 PTMAP06454 111 aaKnown RBP8.49□□□□□ -1.05
LRRC39-202ENST00000370137 ARID4AP29374 1257 aaPredicted RBP8.49□□□□□ -1.05
LRRC39-202ENST00000370137 FAM174AQ8TBP5 190 aa8.49□□□□□ -1.05
LRRC39-202ENST00000370137 PRM3Q9NNZ6 103 aa8.49□□□□□ -1.05
LRRC39-202ENST00000370137 PNMA2Q9UL42 364 aa8.49□□□□□ -1.05
LRRC39-202ENST00000370137 WASF2Q9Y6W5 498 aa8.49□□□□□ -1.05
LRRC39-202ENST00000370137 PAX3P23760 479 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 CCDC144BQ3MJ40 725 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 TMEM259Q4ZIN3 620 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 SH3RF1Q7Z6J0 888 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 BPHLQ86WA6 291 aaPredicted RBP8.48□□□□□ -1.05
LRRC39-202ENST00000370137 GMPR2Q9P2T1 348 aaKnown RBP8.48□□□□□ -1.05
LRRC39-202ENST00000370137 GABBR1Q9UBS5 961 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 PALM3A6NDB9 673 aaPredicted RBP8.48□□□□□ -1.05
LRRC39-202ENST00000370137 NBPF14Q5TI25 921 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 CDK15Q96Q40 435 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 ATP13A2Q9NQ11 1180 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 TBX22Q9Y458 520 aa8.48□□□□□ -1.05
LRRC39-202ENST00000370137 AP1G2O75843 785 aa8.47□□□□□ -1.05
LRRC39-202ENST00000370137 KRBA2Q6ZNG9 492 aa8.47□□□□□ -1.05
LRRC39-202ENST00000370137 SH3BP5LQ7L8J4 393 aa8.47□□□□□ -1.05
LRRC39-202ENST00000370137 DHX38Q92620 1227 aaKnown RBP8.47□□□□□ -1.05
LRRC39-202ENST00000370137 GPKOWQ92917 476 aaPredicted RBP eCLIP8.47□□□□□ -1.05
LRRC39-202ENST00000370137 MTA3Q9BTC8 594 aa8.47□□□□□ -1.05
LRRC39-202ENST00000370137 C1QTNF2Q9BXJ5 285 aa8.47□□□□□ -1.05
LRRC39-202ENST00000370137 NOP58Q9Y2X3 529 aaKnown RBP8.47□□□□□ -1.05
LRRC39-202ENST00000370137 CLSPNQ9HAW4 1339 aa8.46□□□□□ -1.06
LRRC39-202ENST00000370137 SOWAHDA6NJG2 315 aa8.46□□□□□ -1.06
LRRC39-202ENST00000370137 TAGLNQ01995 201 aaKnown RBP8.46□□□□□ -1.06
LRRC39-202ENST00000370137 AGERQ15109 404 aa8.46□□□□□ -1.06
LRRC39-202ENST00000370137 PIK3R5Q8WYR1 880 aa8.46□□□□□ -1.06
LRRC39-202ENST00000370137 ZNF775Q96BV0 537 aaPredicted RBP8.46□□□□□ -1.06
LRRC39-202ENST00000370137 NNTQ13423 1086 aa8.45□□□□□ -1.06
LRRC39-202ENST00000370137 NR6A1Q15406 480 aa8.45□□□□□ -1.06
LRRC39-202ENST00000370137 CCDC146Q8IYE0 955 aa8.45□□□□□ -1.06
LRRC39-202ENST00000370137 NLGN1Q8N2Q7 840 aa8.45□□□□□ -1.06
LRRC39-202ENST00000370137 RPS6KL1Q9Y6S9 549 aa8.45□□□□□ -1.06
LRRC39-202ENST00000370137 ADH1CP00326 375 aa8.44□□□□□ -1.06
LRRC39-202ENST00000370137 USP17L8P0C7I0 530 aa8.44□□□□□ -1.06
LRRC39-202ENST00000370137 RBM10P98175 930 aaKnown RBP8.44□□□□□ -1.06
LRRC39-202ENST00000370137 C9orf131Q5VYM1 1079 aa8.44□□□□□ -1.06
LRRC39-202ENST00000370137 MAF1Q9H063 256 aa8.44□□□□□ -1.06
LRRC39-202ENST00000370137 PIF1Q9H611 641 aa8.44□□□□□ -1.06
LRRC39-202ENST00000370137 FKBPLQ9UIM3 349 aa8.44□□□□□ -1.06
LRRC39-202ENST00000370137 CAPN5O15484 640 aaPredicted RBP8.43□□□□□ -1.06
LRRC39-202ENST00000370137 TCEAL1Q15170 157 aa8.43□□□□□ -1.06
LRRC39-202ENST00000370137 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
LRRC39-202ENST00000370137 PDXDC2PQ6P474 469 aa8.43□□□□□ -1.06
LRRC39-202ENST00000370137 CLEC4GQ6UXB4 293 aa8.43□□□□□ -1.06
LRRC39-202ENST00000370137 TSHZ1Q6ZSZ6 1077 aa8.43□□□□□ -1.06
LRRC39-202ENST00000370137 CCAR1Q8IX12 1150 aaKnown RBP8.43□□□□□ -1.06
LRRC39-202ENST00000370137 TRMT44Q8IYL2 757 aaKnown RBP8.43□□□□□ -1.06
LRRC39-202ENST00000370137 IQSEC3Q9UPP2 1182 aaPredicted RBP8.43□□□□□ -1.06
LRRC39-202ENST00000370137 C11orf95C9JLR9 678 aaPredicted RBP8.42□□□□□ -1.06
LRRC39-202ENST00000370137 GTF2F1P35269 517 aaKnown RBP eCLIP8.42□□□□□ -1.06
LRRC39-202ENST00000370137 GRM5P41594 1212 aa8.42□□□□□ -1.06
LRRC39-202ENST00000370137 HDLBPQ00341 1268 aaKnown RBP8.42□□□□□ -1.06
LRRC39-202ENST00000370137 WDR78Q5VTH9 848 aa8.42□□□□□ -1.06
LRRC39-202ENST00000370137 ZCRB1Q8TBF4 217 aaKnown RBP8.42□□□□□ -1.06
LRRC39-202ENST00000370137 EPS8L1Q8TE68 723 aa8.42□□□□□ -1.06
LRRC39-202ENST00000370137 KLF16Q9BXK1 252 aaPredicted RBP8.42□□□□□ -1.06
LRRC39-202ENST00000370137 BRINP2Q9C0B6 783 aa8.42□□□□□ -1.06
LRRC39-202ENST00000370137 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
LRRC39-202ENST00000370137 BIN2Q9UBW5 565 aaPredicted RBP8.42□□□□□ -1.06
LRRC39-202ENST00000370137 PRKAG2Q9UGJ0 569 aa8.42□□□□□ -1.06
LRRC39-202ENST00000370137 CCER2I3L3R5 266 aa8.41□□□□□ -1.06
LRRC39-202ENST00000370137 KIF4AO95239 1232 aa8.41□□□□□ -1.06
LRRC39-202ENST00000370137 ARID5BQ14865 1188 aa8.41□□□□□ -1.06
LRRC39-202ENST00000370137 C4orf46Q504U0 113 aa8.41□□□□□ -1.06
LRRC39-202ENST00000370137 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
LRRC39-202ENST00000370137 TFIP11Q9UBB9 837 aaKnown RBP8.41□□□□□ -1.06
LRRC39-202ENST00000370137 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 TIMP2P16035 220 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 NR5A1Q13285 461 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 ERFEQ4G0M1 354 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 SECISBP2LQ93073 1101 aaKnown RBP8.4□□□□□ -1.06
LRRC39-202ENST00000370137 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 G3BP2Q9UN86 482 aaKnown RBP8.4□□□□□ -1.06
LRRC39-202ENST00000370137 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.06
LRRC39-202ENST00000370137 WDHD1O75717 1129 aaPredicted RBP8.39□□□□□ -1.07
LRRC39-202ENST00000370137 NR3C2P08235 984 aa8.39□□□□□ -1.07
LRRC39-202ENST00000370137 PLEKHG6Q3KR16 790 aa8.39□□□□□ -1.07
LRRC39-202ENST00000370137 PMFBP1Q8TBY8 1022 aa8.39□□□□□ -1.07
LRRC39-202ENST00000370137 OCSTAMPQ9BR26 566 aa8.39□□□□□ -1.07
LRRC39-202ENST00000370137 ARHGAP9Q9BRR9 750 aa8.39□□□□□ -1.07
LRRC39-202ENST00000370137 COL4A3BPQ9Y5P4 624 aa8.39□□□□□ -1.07
LRRC39-202ENST00000370137 BMP1P13497 986 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms