RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 LINC00116Q8NCU8 138 aa29.37■■■□□ 2.29
RTCA-202ENST00000370126 MTHFSP49914 203 aa29.36■■■□□ 2.29
RTCA-202ENST00000370126 ZNF831Q5JPB2 1677 aa29.35■■■□□ 2.29
RTCA-202ENST00000370126 ITPK1Q13572 414 aa29.35■■■□□ 2.29
RTCA-202ENST00000370126 CC2D1BQ5T0F9 858 aaKnown RBP29.34■■■□□ 2.29
RTCA-202ENST00000370126 ATP6V1AP38606 617 aa29.33■■■□□ 2.29
RTCA-202ENST00000370126 GOLGB1Q14789 3259 aaKnown RBP29.32■■■□□ 2.28
RTCA-202ENST00000370126 NPC1L1Q9UHC9 1359 aa29.32■■■□□ 2.28
RTCA-202ENST00000370126 C1orf141Q5JVX7 400 aa29.32■■■□□ 2.28
RTCA-202ENST00000370126 CHD4Q14839 1912 aa29.32■■■□□ 2.28
RTCA-202ENST00000370126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.31■■■□□ 2.28
RTCA-202ENST00000370126 PHF14O94880 888 aa29.31■■■□□ 2.28
RTCA-202ENST00000370126 SSFA2P28290 1259 aa29.31■■■□□ 2.28
RTCA-202ENST00000370126 SMIM5Q71RC9 77 aa29.31■■■□□ 2.28
RTCA-202ENST00000370126 NLGN2Q8NFZ4 835 aa29.31■■■□□ 2.28
RTCA-202ENST00000370126 SCN11AQ9UI33 1791 aa29.3■■■□□ 2.28
RTCA-202ENST00000370126 COL5A3P25940 1745 aaPredicted RBP29.29■■■□□ 2.28
RTCA-202ENST00000370126 CABP4P57796 275 aa29.29■■■□□ 2.28
RTCA-202ENST00000370126 SLC4A9Q96Q91 983 aa29.28■■■□□ 2.28
RTCA-202ENST00000370126 GNPATO15228 680 aa29.27■■■□□ 2.28
RTCA-202ENST00000370126 GPR162Q16538 588 aa29.26■■■□□ 2.27
RTCA-202ENST00000370126 RBM42Q9BTD8 480 aaKnown RBP29.26■■■□□ 2.27
RTCA-202ENST00000370126 COL3A1P02461 1466 aaPredicted RBP29.24■■■□□ 2.27
RTCA-202ENST00000370126 DIAPH1O60610 1272 aaKnown RBP29.24■■■□□ 2.27
RTCA-202ENST00000370126 HMOX1P09601 288 aa29.24■■■□□ 2.27
RTCA-202ENST00000370126 AKAP4Q5JQC9 854 aa29.23■■■□□ 2.27
RTCA-202ENST00000370126 NFATC2IPQ8NCF5 419 aa29.22■■■□□ 2.27
RTCA-202ENST00000370126 VIRMAQ69YN4 1812 aaKnown RBP29.22■■■□□ 2.27
RTCA-202ENST00000370126 CD2APQ9Y5K6 639 aa29.21■■■□□ 2.27
RTCA-202ENST00000370126 CICQ96RK0 1608 aaPredicted RBP29.2■■■□□ 2.27
RTCA-202ENST00000370126 CNGB1Q14028 1251 aaPredicted RBP29.2■■■□□ 2.26
RTCA-202ENST00000370126 PELP1Q8IZL8 1130 aaKnown RBP29.2■■■□□ 2.26
RTCA-202ENST00000370126 CNTNAP4Q9C0A0 1308 aa29.2■■■□□ 2.26
RTCA-202ENST00000370126 MRC1P22897 1456 aa29.19■■■□□ 2.26
RTCA-202ENST00000370126 RC3H1Q5TC82 1133 aaKnown RBP29.19■■■□□ 2.26
RTCA-202ENST00000370126 MYH14Q7Z406 1995 aaKnown RBP29.19■■■□□ 2.26
RTCA-202ENST00000370126 TJP1Q07157 1748 aa29.18■■■□□ 2.26
RTCA-202ENST00000370126 RTCBQ9Y3I0 505 aaKnown RBP29.18■■■□□ 2.26
RTCA-202ENST00000370126 ADAMTS7Q9UKP4 1686 aa29.18■■■□□ 2.26
RTCA-202ENST00000370126 PTCD1O75127 700 aaKnown RBP29.16■■■□□ 2.26
RTCA-202ENST00000370126 MTHFSDQ2M296 383 aaKnown RBP29.15■■■□□ 2.26
RTCA-202ENST00000370126 TRAPPC3LQ5T215 181 aa29.15■■■□□ 2.26
RTCA-202ENST00000370126 SLC52A2Q9HAB3 445 aa29.15■■■□□ 2.26
RTCA-202ENST00000370126 LGR6Q9HBX8 967 aa29.15■■■□□ 2.26
RTCA-202ENST00000370126 YBX3P16989 372 aaKnown RBP eCLIP29.14■■■□□ 2.264e-8■■□□□ 14.1
RTCA-202ENST00000370126 ADRA2BP18089 450 aa29.14■■■□□ 2.26
RTCA-202ENST00000370126 ZNF784Q8NCA9 323 aaPredicted RBP29.14■■■□□ 2.26
RTCA-202ENST00000370126 C4AP0C0L4 1744 aa29.14■■■□□ 2.25
RTCA-202ENST00000370126 RNMTO43148 476 aaKnown RBP29.13■■■□□ 2.25
RTCA-202ENST00000370126 RPS6KA4O75676 772 aa29.12■■■□□ 2.25
RTCA-202ENST00000370126 ARHGEF1Q92888 912 aaKnown RBP29.11■■■□□ 2.25
RTCA-202ENST00000370126 GRIN3BO60391 1043 aa29.1■■■□□ 2.25
RTCA-202ENST00000370126 U2SURPO15042 1029 aaKnown RBP29.09■■■□□ 2.25
RTCA-202ENST00000370126 MMP10P09238 476 aa29.09■■■□□ 2.25
RTCA-202ENST00000370126 CRKLP46109 303 aaKnown RBP29.08■■■□□ 2.25
RTCA-202ENST00000370126 KCPQ6ZWJ8 1503 aa29.07■■■□□ 2.24
RTCA-202ENST00000370126 NLGN1Q8N2Q7 840 aa29.07■■■□□ 2.24
RTCA-202ENST00000370126 KIF13BQ9NQT8 1826 aa29.07■■■□□ 2.24
RTCA-202ENST00000370126 RFC4P35249 363 aa29.06■■■□□ 2.24
RTCA-202ENST00000370126 GYS1P13807 737 aa29.05■■■□□ 2.24
RTCA-202ENST00000370126 UBR2Q8IWV8 1755 aa29.04■■■□□ 2.24
RTCA-202ENST00000370126 SLC39A6Q13433 755 aa29.04■■■□□ 2.24
RTCA-202ENST00000370126 DNAJC10Q8IXB1 793 aa29.03■■■□□ 2.24
RTCA-202ENST00000370126 CFAP53Q96M91 514 aa29.03■■■□□ 2.24
RTCA-202ENST00000370126 KIAA1551Q9HCM1 1747 aa29.03■■■□□ 2.24
RTCA-202ENST00000370126 INTS5Q6P9B9 1019 aaKnown RBP29.02■■■□□ 2.24
RTCA-202ENST00000370126 GAS2L2Q8NHY3 880 aa29.02■■■□□ 2.24
RTCA-202ENST00000370126 PPP2R1AP30153 589 aa29■■■□□ 2.23
RTCA-202ENST00000370126 C10orf71Q711Q0 1435 aa29■■■□□ 2.23
RTCA-202ENST00000370126 SIPA1L3O60292 1781 aaPredicted RBP29■■■□□ 2.23
RTCA-202ENST00000370126 CCDC87Q9NVE4 849 aa28.99■■■□□ 2.23
RTCA-202ENST00000370126 PXDNLA1KZ92 1463 aa28.98■■■□□ 2.23
RTCA-202ENST00000370126 USP42Q9H9J4 1324 aaKnown RBP28.98■■■□□ 2.23
RTCA-202ENST00000370126 GNAT3A8MTJ3 354 aa28.98■■■□□ 2.23
RTCA-202ENST00000370126 RSPH6AQ9H0K4 717 aa28.98■■■□□ 2.23
RTCA-202ENST00000370126 SRP68Q9UHB9 627 aaKnown RBP28.98■■■□□ 2.23
RTCA-202ENST00000370126 CYP19A1P11511 503 aaPredicted RBP28.97■■■□□ 2.23
RTCA-202ENST00000370126 N4BP2Q86UW6 1770 aaPredicted RBP28.96■■■□□ 2.23
RTCA-202ENST00000370126 PRKAR2BP31323 418 aa28.96■■■□□ 2.23
RTCA-202ENST00000370126 VSIG10Q8N0Z9 540 aa28.96■■■□□ 2.23
RTCA-202ENST00000370126 IL17REQ8NFR9 667 aa28.96■■■□□ 2.23
RTCA-202ENST00000370126 WWC3Q9ULE0 1092 aa28.96■■■□□ 2.23
RTCA-202ENST00000370126 SOS1Q07889 1333 aaPredicted RBP28.95■■■□□ 2.23
RTCA-202ENST00000370126 PHACTR3Q96KR7 559 aa28.95■■■□□ 2.22
RTCA-202ENST00000370126 NUDCQ9Y266 331 aa28.95■■■□□ 2.22
RTCA-202ENST00000370126 PARP3Q9Y6F1 533 aa28.95■■■□□ 2.22
RTCA-202ENST00000370126 TGFB2P61812 414 aa28.93■■■□□ 2.22
RTCA-202ENST00000370126 TEFQ10587 303 aa28.93■■■□□ 2.22
RTCA-202ENST00000370126 FKBP8Q14318 412 aa28.93■■■□□ 2.22
RTCA-202ENST00000370126 CEMIPQ8WUJ3 1361 aa28.92■■■□□ 2.22
RTCA-202ENST00000370126 TTC5Q8N0Z6 440 aa28.92■■■□□ 2.22
RTCA-202ENST00000370126 ZBTB1Q9Y2K1 713 aa28.91■■■□□ 2.22
RTCA-202ENST00000370126 U2AF1L5P0DN76 240 aaPredicted RBP28.9■■■□□ 2.22
RTCA-202ENST00000370126 U2AF1Q01081 240 aaKnown RBP eCLIP28.9■■■□□ 2.22
RTCA-202ENST00000370126 COL15A1P39059 1388 aa28.89■■■□□ 2.22
RTCA-202ENST00000370126 BRCA1P38398 1863 aaKnown RBP28.89■■■□□ 2.22
RTCA-202ENST00000370126 DDR1Q08345 913 aa28.89■■■□□ 2.22
RTCA-202ENST00000370126 ZPR1O75312 459 aa28.88■■■□□ 2.21
RTCA-202ENST00000370126 USPL1Q5W0Q7 1092 aa28.88■■■□□ 2.21
RTCA-202ENST00000370126 ZNF790Q6PG37 636 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms