RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CEP131Q9UPN4 1083 aa21.03■□□□□ 0.96
SNX27-203ENST00000368843 EXOC6BQ9Y2D4 811 aa21.03■□□□□ 0.96
SNX27-203ENST00000368843 DAPK1P53355 1430 aa21.02■□□□□ 0.96
SNX27-203ENST00000368843 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
SNX27-203ENST00000368843 PPP4R3AQ6IN85 833 aa21.02■□□□□ 0.96
SNX27-203ENST00000368843 TAX1BP1Q86VP1 789 aa21.02■□□□□ 0.96
SNX27-203ENST00000368843 THUMPD2Q9BTF0 503 aaKnown RBP21.02■□□□□ 0.96
SNX27-203ENST00000368843 NBPF8Q3BBV2 869 aa21.02■□□□□ 0.95
SNX27-203ENST00000368843 CCDC61Q9Y6R9 512 aa21.02■□□□□ 0.95
SNX27-203ENST00000368843 TMPOP42166 694 aaKnown RBP21.01■□□□□ 0.95
SNX27-203ENST00000368843 ZSCAN31Q96LW9 406 aaPredicted RBP21.01■□□□□ 0.95
SNX27-203ENST00000368843 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
SNX27-203ENST00000368843 PPM1FP49593 454 aaPredicted RBP21.01■□□□□ 0.95
SNX27-203ENST00000368843 DHX8Q14562 1220 aaKnown RBP21.01■□□□□ 0.95
SNX27-203ENST00000368843 LARP1Q6PKG0 1096 aaKnown RBP21■□□□□ 0.95
SNX27-203ENST00000368843 SYNJ1O43426 1573 aa21■□□□□ 0.95
SNX27-203ENST00000368843 ARAP1Q96P48 1450 aa21■□□□□ 0.95
SNX27-203ENST00000368843 EIF5P55010 431 aaKnown RBP21■□□□□ 0.95
SNX27-203ENST00000368843 IL27Q8NEV9 243 aa21■□□□□ 0.95
SNX27-203ENST00000368843 BOLA2Q9H3K6 86 aa21■□□□□ 0.95
SNX27-203ENST00000368843 TMEM57Q8N5G2 664 aa21■□□□□ 0.95
SNX27-203ENST00000368843 SPDYE4A6NLX3 237 aa21■□□□□ 0.95
SNX27-203ENST00000368843 C11orf95C9JLR9 678 aaPredicted RBP21■□□□□ 0.95
SNX27-203ENST00000368843 SLC5A1P13866 664 aa21■□□□□ 0.95
SNX27-203ENST00000368843 IFIT5Q13325 482 aaKnown RBP21■□□□□ 0.95
SNX27-203ENST00000368843 SMARCA5O60264 1052 aaPredicted RBP21■□□□□ 0.95
SNX27-203ENST00000368843 NAPBQ9H115 298 aa21■□□□□ 0.95
SNX27-203ENST00000368843 CWC15Q9P013 229 aaKnown RBP20.99■□□□□ 0.95
SNX27-203ENST00000368843 ZNF444Q8N0Y2 327 aaPredicted RBP20.99■□□□□ 0.95
SNX27-203ENST00000368843 KIAA1328Q86T90 577 aa20.99■□□□□ 0.95
SNX27-203ENST00000368843 GBP2P32456 591 aaPredicted RBP20.98■□□□□ 0.95
SNX27-203ENST00000368843 UBA5Q9GZZ9 404 aa20.98■□□□□ 0.95
SNX27-203ENST00000368843 RANBP6O60518 1105 aaKnown RBP20.98■□□□□ 0.95
SNX27-203ENST00000368843 TMX1Q9H3N1 280 aa20.98■□□□□ 0.95
SNX27-203ENST00000368843 POTEJP0CG39 1038 aa20.98■□□□□ 0.95
SNX27-203ENST00000368843 CUL5Q93034 780 aa20.98■□□□□ 0.95
SNX27-203ENST00000368843 KIF1BPQ96EK5 621 aa20.98■□□□□ 0.95
SNX27-203ENST00000368843 U3KPZ7 1027 aaPredicted RBP20.98■□□□□ 0.95
SNX27-203ENST00000368843 CDK13Q14004 1512 aaKnown RBP20.97■□□□□ 0.95
SNX27-203ENST00000368843 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
SNX27-203ENST00000368843 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
SNX27-203ENST00000368843 PPP1R12BO60237 982 aaPredicted RBP20.97■□□□□ 0.95
SNX27-203ENST00000368843 GPTP24298 496 aa20.97■□□□□ 0.95
SNX27-203ENST00000368843 DNAI2Q9GZS0 605 aa20.97■□□□□ 0.95
SNX27-203ENST00000368843 NUP62CLQ9H1M0 184 aa20.97■□□□□ 0.95
SNX27-203ENST00000368843 AMOTQ4VCS5 1084 aa20.96■□□□□ 0.95
SNX27-203ENST00000368843 FOXO3O43524 673 aa20.96■□□□□ 0.95
SNX27-203ENST00000368843 MAP3K12Q12852 859 aa20.96■□□□□ 0.95
SNX27-203ENST00000368843 UPF3BQ9BZI7 483 aaKnown RBP20.96■□□□□ 0.95
SNX27-203ENST00000368843 LRRFIP2Q9Y608 721 aaKnown RBP20.96■□□□□ 0.95
SNX27-203ENST00000368843 LEKR1Q6ZMV7 388 aa20.96■□□□□ 0.95
SNX27-203ENST00000368843 TMEM87AQ8NBN3 555 aa20.95■□□□□ 0.95
SNX27-203ENST00000368843 TOPBP1Q92547 1522 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 RAB11FIP3O75154 756 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 CAMK4Q16566 473 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 C6orf229H3BNL8 230 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 JAKMIP3Q5VZ66 844 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 ANKRD18BA2A2Z9 1011 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 LIG1P18858 919 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 ARHGEF11O15085 1522 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 EXOC5O00471 708 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 NME9Q86XW9 330 aa20.95■□□□□ 0.94
SNX27-203ENST00000368843 ZNF397Q8NF99 534 aaPredicted RBP20.95■□□□□ 0.94
SNX27-203ENST00000368843 SLC4A8Q2Y0W8 1093 aa20.94■□□□□ 0.94
SNX27-203ENST00000368843 PRPF40BQ6NWY9 871 aaKnown RBP20.94■□□□□ 0.94
SNX27-203ENST00000368843 RPAP2Q8IXW5 612 aaPredicted RBP20.94■□□□□ 0.94
SNX27-203ENST00000368843 CCDC82Q8N4S0 544 aa20.94■□□□□ 0.94
SNX27-203ENST00000368843 TAF3Q5VWG9 929 aa20.94■□□□□ 0.94
SNX27-203ENST00000368843 FAM135AQ9P2D6 1515 aa20.94■□□□□ 0.94
SNX27-203ENST00000368843 CCDC83Q8IWF9 413 aa20.94■□□□□ 0.94
SNX27-203ENST00000368843 ERICH4A6NGS2 130 aa20.93■□□□□ 0.94
SNX27-203ENST00000368843 CD109Q6YHK3 1445 aa20.93■□□□□ 0.94
SNX27-203ENST00000368843 SMTNL1A8MU46 457 aa20.93■□□□□ 0.94
SNX27-203ENST00000368843 CCDC8Q9H0W5 538 aaPredicted RBP20.93■□□□□ 0.94
SNX27-203ENST00000368843 SLF2Q8IX21 1173 aa20.93■□□□□ 0.94
SNX27-203ENST00000368843 AMOTL2Q9Y2J4 779 aa20.93■□□□□ 0.94
SNX27-203ENST00000368843 MX1P20591 662 aa20.92■□□□□ 0.94
SNX27-203ENST00000368843 TAF4BQ92750 862 aa20.92■□□□□ 0.94
SNX27-203ENST00000368843 TSG101Q99816 390 aa20.92■□□□□ 0.94
SNX27-203ENST00000368843 PHF8Q9UPP1 1060 aa20.92■□□□□ 0.94
SNX27-203ENST00000368843 ZNF622Q969S3 477 aaKnown RBP eCLIP20.92■□□□□ 0.94
SNX27-203ENST00000368843 EPB41L2O43491 1005 aaKnown RBP20.92■□□□□ 0.94
SNX27-203ENST00000368843 CTCFLQ8NI51 663 aaPredicted RBP20.92■□□□□ 0.94
SNX27-203ENST00000368843 IQCEQ6IPM2 695 aa20.91■□□□□ 0.94
SNX27-203ENST00000368843 KIF14Q15058 1648 aa20.91■□□□□ 0.94
SNX27-203ENST00000368843 GUCY1B3Q02153 619 aa20.91■□□□□ 0.94
SNX27-203ENST00000368843 SLC12A7Q9Y666 1083 aa20.91■□□□□ 0.94
SNX27-203ENST00000368843 GLRX3O76003 335 aaKnown RBP20.91■□□□□ 0.94
SNX27-203ENST00000368843 ZNF213O14771 459 aa20.9■□□□□ 0.94
SNX27-203ENST00000368843 CEBPAP49715 358 aaPredicted RBP20.9■□□□□ 0.94
SNX27-203ENST00000368843 ZBTB3Q9H5J0 574 aa20.9■□□□□ 0.94
SNX27-203ENST00000368843 EHMT1Q9H9B1 1298 aa20.9■□□□□ 0.94
SNX27-203ENST00000368843 IQCA1Q86XH1 822 aa20.9■□□□□ 0.94
SNX27-203ENST00000368843 KLHL10Q6JEL2 608 aa20.9■□□□□ 0.94
SNX27-203ENST00000368843 TRMT1LQ7Z2T5 733 aaKnown RBP20.9■□□□□ 0.94
SNX27-203ENST00000368843 F6X3S4 739 aa20.9■□□□□ 0.94
SNX27-203ENST00000368843 FEZ1Q99689 392 aa20.9■□□□□ 0.94
SNX27-203ENST00000368843 KRT28Q7Z3Y7 464 aa20.89■□□□□ 0.94
SNX27-203ENST00000368843 CFAP100Q494V2 611 aa20.89■□□□□ 0.93
SNX27-203ENST00000368843 CCDC150Q8NCX0 1101 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms