RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 IGHDP01880 384 aa18.32■□□□□ 0.52
FBXO28-201ENST00000366862 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
FBXO28-201ENST00000366862 CKAP2LQ8IYA6 745 aa18.32■□□□□ 0.52
FBXO28-201ENST00000366862 FEZ1Q99689 392 aa18.32■□□□□ 0.52
FBXO28-201ENST00000366862 STX6O43752 255 aa18.32■□□□□ 0.52
FBXO28-201ENST00000366862 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
FBXO28-201ENST00000366862 NFE2L2Q16236 605 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 TANGO6Q9C0B7 1094 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 MAP3K1Q13233 1512 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 ZNF165P49910 485 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 RAPGEF4Q8WZA2 1011 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 SPA17Q15506 151 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 ZSCAN25Q6NSZ9 544 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 KIF1BPQ96EK5 621 aa18.31■□□□□ 0.52
FBXO28-201ENST00000366862 IL1RAPL2Q9NP60 686 aa18.3■□□□□ 0.52
FBXO28-201ENST00000366862 DAPK1P53355 1430 aa18.3■□□□□ 0.52
FBXO28-201ENST00000366862 C9orf84Q5VXU9 1444 aa18.3■□□□□ 0.52
FBXO28-201ENST00000366862 RNF187Q5TA31 235 aaPredicted RBP18.3■□□□□ 0.52
FBXO28-201ENST00000366862 CCDC57Q2TAC2 916 aa18.29■□□□□ 0.52
FBXO28-201ENST00000366862 CTR9Q6PD62 1173 aa18.29■□□□□ 0.52
FBXO28-201ENST00000366862 OGFRQ9NZT2 677 aa18.29■□□□□ 0.52
FBXO28-201ENST00000366862 PRPF40BQ6NWY9 871 aaKnown RBP18.29■□□□□ 0.52
FBXO28-201ENST00000366862 TMC6Q7Z403 805 aa18.29■□□□□ 0.52
FBXO28-201ENST00000366862 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
FBXO28-201ENST00000366862 KRT18P05783 430 aaKnown RBP18.29■□□□□ 0.52
FBXO28-201ENST00000366862 NACAP1Q9BZK3 213 aa18.29■□□□□ 0.52
FBXO28-201ENST00000366862 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
FBXO28-201ENST00000366862 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
FBXO28-201ENST00000366862 TERF1P54274 439 aa18.28■□□□□ 0.52
FBXO28-201ENST00000366862 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
FBXO28-201ENST00000366862 MNAT1P51948 309 aa18.28■□□□□ 0.52
FBXO28-201ENST00000366862 CTDP1Q9Y5B0 961 aaPredicted RBP18.28■□□□□ 0.52
FBXO28-201ENST00000366862 FYB1O15117 783 aa18.28■□□□□ 0.52
FBXO28-201ENST00000366862 SRRTQ9BXP5 876 aaKnown RBP18.28■□□□□ 0.52
FBXO28-201ENST00000366862 EXOC6BQ9Y2D4 811 aa18.28■□□□□ 0.52
FBXO28-201ENST00000366862 HDAC1Q13547 482 aaPredicted RBP18.28■□□□□ 0.52
FBXO28-201ENST00000366862 SULT6B1Q6IMI4 303 aa18.28■□□□□ 0.52
FBXO28-201ENST00000366862 IPO4Q8TEX9 1081 aaKnown RBP18.28■□□□□ 0.52
FBXO28-201ENST00000366862 KIF20AO95235 890 aa18.27■□□□□ 0.52
FBXO28-201ENST00000366862 IRX3P78415 501 aaPredicted RBP18.27■□□□□ 0.52
FBXO28-201ENST00000366862 PLEKHO1Q53GL0 409 aaPredicted RBP18.27■□□□□ 0.52
FBXO28-201ENST00000366862 GDPD2Q9HCC8 539 aa18.27■□□□□ 0.52
FBXO28-201ENST00000366862 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
FBXO28-201ENST00000366862 HMGB1P09429 215 aaKnown RBP18.27■□□□□ 0.51
FBXO28-201ENST00000366862 EZRP15311 586 aaKnown RBP18.27■□□□□ 0.51
FBXO28-201ENST00000366862 PAFAH1B1P43034 410 aa18.27■□□□□ 0.51
FBXO28-201ENST00000366862 RAB3GAP1Q15042 981 aa18.27■□□□□ 0.51
FBXO28-201ENST00000366862 GOLGA6L10A0A0M3HER8 536 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 ARFGAP3Q9NP61 516 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 NSD3Q9BZ95 1437 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 SMARCA5O60264 1052 aaPredicted RBP18.26■□□□□ 0.51
FBXO28-201ENST00000366862 PSME1Q06323 249 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 FAM200AQ8TCP9 573 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 SLU7O95391 586 aaKnown RBP18.26■□□□□ 0.51
FBXO28-201ENST00000366862 TRIM27P14373 513 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 GJB2P29033 226 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 LUZP1Q86V48 1076 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 SMC5Q8IY18 1101 aa18.26■□□□□ 0.51
FBXO28-201ENST00000366862 RAI14Q9P0K7 980 aa18.25■□□□□ 0.51
FBXO28-201ENST00000366862 ZNF830Q96NB3 372 aaPredicted RBP18.25■□□□□ 0.51
FBXO28-201ENST00000366862 RRAGDQ9NQL2 400 aaPredicted RBP18.25■□□□□ 0.51
FBXO28-201ENST00000366862 USO1O60763 962 aaKnown RBP18.25■□□□□ 0.51
FBXO28-201ENST00000366862 GBP2P32456 591 aaPredicted RBP18.25■□□□□ 0.51
FBXO28-201ENST00000366862 SIL1Q9H173 461 aa18.25■□□□□ 0.51
FBXO28-201ENST00000366862 YEATS4O95619 227 aa18.24■□□□□ 0.51
FBXO28-201ENST00000366862 TICAM2Q86XR7 235 aa18.24■□□□□ 0.51
FBXO28-201ENST00000366862 FSIP1Q8NA03 581 aa18.24■□□□□ 0.51
FBXO28-201ENST00000366862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.24■□□□□ 0.511e-15■■■■■ 125
FBXO28-201ENST00000366862 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
FBXO28-201ENST00000366862 TTC22Q5TAA0 569 aa18.24■□□□□ 0.51
FBXO28-201ENST00000366862 DHX37Q8IY37 1157 aaKnown RBP18.24■□□□□ 0.51
FBXO28-201ENST00000366862 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
FBXO28-201ENST00000366862 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
FBXO28-201ENST00000366862 NUCB1Q02818 461 aa18.23■□□□□ 0.51
FBXO28-201ENST00000366862 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
FBXO28-201ENST00000366862 ANKRD62A6NC57 917 aa18.23■□□□□ 0.51
FBXO28-201ENST00000366862 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.23■□□□□ 0.51
FBXO28-201ENST00000366862 SKILP12757 684 aa18.23■□□□□ 0.51
FBXO28-201ENST00000366862 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
FBXO28-201ENST00000366862 NAA15Q9BXJ9 866 aaKnown RBP18.23■□□□□ 0.51
FBXO28-201ENST00000366862 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
FBXO28-201ENST00000366862 NLRP6P59044 892 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 CCDC186Q7Z3E2 898 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 GNG11P61952 73 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 FKBP15Q5T1M5 1219 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 BMP2KQ9NSY1 1161 aaPredicted RBP18.22■□□□□ 0.51
FBXO28-201ENST00000366862 NF2P35240 595 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 EVA1CP58658 441 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
FBXO28-201ENST00000366862 GIMAP6Q6P9H5 292 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 C8orf76Q96K31 380 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 ARHGAP5Q13017 1502 aa18.22■□□□□ 0.51
FBXO28-201ENST00000366862 TUBB4BP68371 445 aa18.21■□□□□ 0.51
FBXO28-201ENST00000366862 IFFO1Q0D2I5 559 aa18.21■□□□□ 0.51
FBXO28-201ENST00000366862 CCDC12Q8WUD4 166 aaPredicted RBP18.21■□□□□ 0.51
FBXO28-201ENST00000366862 HECW1Q76N89 1606 aa18.21■□□□□ 0.51
FBXO28-201ENST00000366862 NUP133Q8WUM0 1156 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms