RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 PANK1Q8TE04 598 aa12.08□□□□□ -0.48
CNIH4-202ENST00000366857 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
CNIH4-202ENST00000366857 ADCY9O60503 1353 aa12.08□□□□□ -0.48
CNIH4-202ENST00000366857 COL4A1P02462 1669 aa12.08□□□□□ -0.48
CNIH4-202ENST00000366857 AKAP4Q5JQC9 854 aa12.08□□□□□ -0.48
CNIH4-202ENST00000366857 SMC5Q8IY18 1101 aa12.08□□□□□ -0.48
CNIH4-202ENST00000366857 HOXB7P09629 217 aa12.07□□□□□ -0.48
CNIH4-202ENST00000366857 LRRC59Q96AG4 307 aaKnown RBP12.07□□□□□ -0.48
CNIH4-202ENST00000366857 WDR17Q8IZU2 1322 aa12.07□□□□□ -0.48
CNIH4-202ENST00000366857 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
CNIH4-202ENST00000366857 LMOD3Q0VAK6 560 aa12.07□□□□□ -0.48
CNIH4-202ENST00000366857 UTYO14607 1347 aa12.07□□□□□ -0.48
CNIH4-202ENST00000366857 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
CNIH4-202ENST00000366857 CENPQQ7L2Z9 268 aaPredicted RBP12.06□□□□□ -0.48
CNIH4-202ENST00000366857 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
CNIH4-202ENST00000366857 LGR6Q9HBX8 967 aa12.06□□□□□ -0.48
CNIH4-202ENST00000366857 PSME1Q06323 249 aa12.06□□□□□ -0.48
CNIH4-202ENST00000366857 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
CNIH4-202ENST00000366857 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
CNIH4-202ENST00000366857 GNAT3A8MTJ3 354 aa12.06□□□□□ -0.48
CNIH4-202ENST00000366857 MS4A1P11836 297 aa12.06□□□□□ -0.48
CNIH4-202ENST00000366857 BCANQ96GW7 911 aa12.05□□□□□ -0.48
CNIH4-202ENST00000366857 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
CNIH4-202ENST00000366857 PTPRCP08575 1304 aa12.05□□□□□ -0.48
CNIH4-202ENST00000366857 NUTM2GQ5VZR2 741 aa12.05□□□□□ -0.48
CNIH4-202ENST00000366857 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
CNIH4-202ENST00000366857 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
CNIH4-202ENST00000366857 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
CNIH4-202ENST00000366857 CYP27B1O15528 508 aa12.04□□□□□ -0.48
CNIH4-202ENST00000366857 RNMTO43148 476 aaKnown RBP12.04□□□□□ -0.48
CNIH4-202ENST00000366857 CALD1Q05682 793 aaKnown RBP12.04□□□□□ -0.48
CNIH4-202ENST00000366857 SKAP1Q86WV1 359 aa12.04□□□□□ -0.48
CNIH4-202ENST00000366857 LTBP1Q14766 1721 aa12.04□□□□□ -0.48
CNIH4-202ENST00000366857 PDE4AP27815 886 aa12.03□□□□□ -0.48
CNIH4-202ENST00000366857 PHKG2P15735 406 aa12.03□□□□□ -0.48
CNIH4-202ENST00000366857 TWISTNBQ3B726 338 aaPredicted RBP12.03□□□□□ -0.48
CNIH4-202ENST00000366857 BACH2Q9BYV9 841 aa12.03□□□□□ -0.48
CNIH4-202ENST00000366857 XPCQ01831 940 aaPredicted RBP12.02□□□□□ -0.48
CNIH4-202ENST00000366857 ZKSCAN2Q63HK3 967 aa12.02□□□□□ -0.48
CNIH4-202ENST00000366857 AKAP11Q9UKA4 1901 aa12.02□□□□□ -0.49
CNIH4-202ENST00000366857 MSH5O43196 834 aa12.02□□□□□ -0.49
CNIH4-202ENST00000366857 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.49
CNIH4-202ENST00000366857 AMOTQ4VCS5 1084 aa12.01□□□□□ -0.49
CNIH4-202ENST00000366857 USHBP1Q8N6Y0 703 aa12.01□□□□□ -0.49
CNIH4-202ENST00000366857 DZIP1LQ8IYY4 767 aaKnown RBP12.01□□□□□ -0.49
CNIH4-202ENST00000366857 LAMA4Q16363 1823 aa12.01□□□□□ -0.49
CNIH4-202ENST00000366857 NEUROD2Q15784 382 aa12.01□□□□□ -0.49
CNIH4-202ENST00000366857 G2E3Q7L622 706 aa12□□□□□ -0.49
CNIH4-202ENST00000366857 MYH7P12883 1935 aa12□□□□□ -0.49
CNIH4-202ENST00000366857 KCNQ3O43525 872 aa12□□□□□ -0.49
CNIH4-202ENST00000366857 ATF3P18847 181 aa12□□□□□ -0.49
CNIH4-202ENST00000366857 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
CNIH4-202ENST00000366857 LRRC37AA6NMS7 1700 aa12□□□□□ -0.49
CNIH4-202ENST00000366857 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
CNIH4-202ENST00000366857 COG6Q9Y2V7 657 aa11.99□□□□□ -0.49
CNIH4-202ENST00000366857 AMPHP49418 695 aa11.99□□□□□ -0.49
CNIH4-202ENST00000366857 IL17RAQ96F46 866 aa11.98□□□□□ -0.49
CNIH4-202ENST00000366857 GIGYF1O75420 1035 aaPredicted RBP11.98□□□□□ -0.49
CNIH4-202ENST00000366857 NUCB1Q02818 461 aa11.98□□□□□ -0.49
CNIH4-202ENST00000366857 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
CNIH4-202ENST00000366857 CABLES1Q8TDN4 633 aa11.97□□□□□ -0.49
CNIH4-202ENST00000366857 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
CNIH4-202ENST00000366857 MYO5AQ9Y4I1 1855 aaKnown RBP11.97□□□□□ -0.49
CNIH4-202ENST00000366857 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.49
CNIH4-202ENST00000366857 NEFLP07196 543 aa11.96□□□□□ -0.49
CNIH4-202ENST00000366857 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
CNIH4-202ENST00000366857 KAZALD1Q96I82 304 aa11.96□□□□□ -0.5
CNIH4-202ENST00000366857 CASP7P55210 303 aa11.95□□□□□ -0.5
CNIH4-202ENST00000366857 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.95□□□□□ -0.5
CNIH4-202ENST00000366857 DDX19BQ9UMR2 479 aa11.95□□□□□ -0.5
CNIH4-202ENST00000366857 POLA2Q14181 598 aa11.95□□□□□ -0.5
CNIH4-202ENST00000366857 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
CNIH4-202ENST00000366857 PRAMEF22A3QJZ6 481 aa11.94□□□□□ -0.5
CNIH4-202ENST00000366857 MTX1Q13505 466 aa11.94□□□□□ -0.5
CNIH4-202ENST00000366857 BEND3Q5T5X7 828 aa11.94□□□□□ -0.5
CNIH4-202ENST00000366857 ATRNO75882 1429 aa11.93□□□□□ -0.5
CNIH4-202ENST00000366857 SMC4Q9NTJ3 1288 aa11.93□□□□□ -0.5
CNIH4-202ENST00000366857 DCTPP1Q9H773 170 aa11.93□□□□□ -0.5
CNIH4-202ENST00000366857 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
CNIH4-202ENST00000366857 CEP85Q6P2H3 762 aa11.93□□□□□ -0.5
CNIH4-202ENST00000366857 CCDC136Q96JN2 1154 aa11.93□□□□□ -0.5
CNIH4-202ENST00000366857 ANKRD44Q8N8A2 993 aa11.92□□□□□ -0.5
CNIH4-202ENST00000366857 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
CNIH4-202ENST00000366857 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
CNIH4-202ENST00000366857 USP42Q9H9J4 1324 aaKnown RBP11.91□□□□□ -0.5
CNIH4-202ENST00000366857 OSBPL3Q9H4L5 887 aa11.91□□□□□ -0.5
CNIH4-202ENST00000366857 SPATA31A1Q5TZJ5 1347 aa11.91□□□□□ -0.5
CNIH4-202ENST00000366857 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.5
CNIH4-202ENST00000366857 PROSER3Q2NL68 480 aa11.9□□□□□ -0.5
CNIH4-202ENST00000366857 SLC4A9Q96Q91 983 aa11.9□□□□□ -0.5
CNIH4-202ENST00000366857 DCAF5Q96JK2 942 aa11.9□□□□□ -0.5
CNIH4-202ENST00000366857 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
CNIH4-202ENST00000366857 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
CNIH4-202ENST00000366857 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
CNIH4-202ENST00000366857 LARP1Q6PKG0 1096 aaKnown RBP11.89□□□□□ -0.51
CNIH4-202ENST00000366857 SEC24BO95487 1268 aa11.89□□□□□ -0.51
CNIH4-202ENST00000366857 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
CNIH4-202ENST00000366857 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
CNIH4-202ENST00000366857 ZNF790Q6PG37 636 aa11.89□□□□□ -0.51
CNIH4-202ENST00000366857 CDK5RAP2Q96SN8 1893 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms