RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 ALDH1L2Q3SY69 923 aa25.57■■□□□ 1.68
CBWD3-201ENST00000360171 SIPA1L3O60292 1781 aaPredicted RBP25.57■■□□□ 1.68
CBWD3-201ENST00000360171 TATP17735 454 aaPredicted RBP25.56■■□□□ 1.68
CBWD3-201ENST00000360171 SCN11AQ9UI33 1791 aa25.56■■□□□ 1.68
CBWD3-201ENST00000360171 ZNF428Q96B54 188 aa25.56■■□□□ 1.68
CBWD3-201ENST00000360171 C1orf141Q5JVX7 400 aa25.55■■□□□ 1.68
CBWD3-201ENST00000360171 MPRIPQ6WCQ1 1025 aa25.55■■□□□ 1.68
CBWD3-201ENST00000360171 TOM1L2Q6ZVM7 507 aa25.55■■□□□ 1.68
CBWD3-201ENST00000360171 DZIP1LQ8IYY4 767 aaKnown RBP25.55■■□□□ 1.68
CBWD3-201ENST00000360171 STRN4Q9NRL3 753 aa25.54■■□□□ 1.68
CBWD3-201ENST00000360171 PLCH1Q4KWH8 1693 aa25.54■■□□□ 1.68
CBWD3-201ENST00000360171 PLEKHG2Q9H7P9 1386 aa25.53■■□□□ 1.68
CBWD3-201ENST00000360171 TAF7Q15545 349 aaPredicted RBP25.53■■□□□ 1.68
CBWD3-201ENST00000360171 LARP1Q6PKG0 1096 aaKnown RBP25.53■■□□□ 1.68
CBWD3-201ENST00000360171 OVOS2A0A0G2JMS6 1433 aa25.53■■□□□ 1.68
CBWD3-201ENST00000360171 NOB1Q9ULX3 412 aaKnown RBP25.52■■□□□ 1.68
CBWD3-201ENST00000360171 RNMTO43148 476 aaKnown RBP25.51■■□□□ 1.67
CBWD3-201ENST00000360171 FTSJ3Q8IY81 847 aaKnown RBP25.51■■□□□ 1.67
CBWD3-201ENST00000360171 SHANK3Q9BYB0 1731 aa25.51■■□□□ 1.67
CBWD3-201ENST00000360171 HDAC1Q13547 482 aaPredicted RBP25.51■■□□□ 1.67
CBWD3-201ENST00000360171 MRPL50Q8N5N7 158 aaKnown RBP25.51■■□□□ 1.67
CBWD3-201ENST00000360171 CARD10Q9BWT7 1032 aa25.51■■□□□ 1.67
CBWD3-201ENST00000360171 BTG4Q9NY30 223 aa25.51■■□□□ 1.67
CBWD3-201ENST00000360171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.51■■□□□ 1.67
CBWD3-201ENST00000360171 KIF16BQ96L93 1317 aa25.5■■□□□ 1.67
CBWD3-201ENST00000360171 BRPF1P55201 1214 aaPredicted RBP25.5■■□□□ 1.67
CBWD3-201ENST00000360171 ANTXR1Q9H6X2 564 aa25.5■■□□□ 1.67
CBWD3-201ENST00000360171 SPG7Q9UQ90 795 aa25.49■■□□□ 1.67
CBWD3-201ENST00000360171 KDM6AO15550 1401 aaPredicted RBP25.49■■□□□ 1.67
CBWD3-201ENST00000360171 TRIM27P14373 513 aa25.49■■□□□ 1.67
CBWD3-201ENST00000360171 EVA1CP58658 441 aa25.49■■□□□ 1.67
CBWD3-201ENST00000360171 BABAM1Q9NWV8 329 aa25.49■■□□□ 1.67
CBWD3-201ENST00000360171 DDX19BQ9UMR2 479 aa25.49■■□□□ 1.67
CBWD3-201ENST00000360171 PHKG2P15735 406 aa25.48■■□□□ 1.67
CBWD3-201ENST00000360171 NRAPQ86VF7 1730 aa25.47■■□□□ 1.67
CBWD3-201ENST00000360171 BRPF3Q9ULD4 1205 aa25.47■■□□□ 1.67
CBWD3-201ENST00000360171 ATF7IPQ6VMQ6 1270 aa25.46■■□□□ 1.67
CBWD3-201ENST00000360171 CYP27B1O15528 508 aa25.46■■□□□ 1.67
CBWD3-201ENST00000360171 TEFQ10587 303 aa25.46■■□□□ 1.67
CBWD3-201ENST00000360171 CERKQ8TCT0 537 aa25.46■■□□□ 1.67
CBWD3-201ENST00000360171 WNK3Q9BYP7 1800 aa25.44■■□□□ 1.66
CBWD3-201ENST00000360171 ADAMTS2O95450 1211 aa25.44■■□□□ 1.66
CBWD3-201ENST00000360171 IFNL2Q8IZJ0 200 aa25.44■■□□□ 1.66
CBWD3-201ENST00000360171 TBC1D2Q9BYX2 928 aa25.43■■□□□ 1.66
CBWD3-201ENST00000360171 IPO8O15397 1037 aaKnown RBP25.42■■□□□ 1.66
CBWD3-201ENST00000360171 IL2RBP14784 551 aa25.42■■□□□ 1.66
CBWD3-201ENST00000360171 SMC5Q8IY18 1101 aa25.42■■□□□ 1.66
CBWD3-201ENST00000360171 KCNQ3O43525 872 aa25.41■■□□□ 1.66
CBWD3-201ENST00000360171 MRC1P22897 1456 aa25.41■■□□□ 1.66
CBWD3-201ENST00000360171 BTBD11A6QL63 1104 aa25.41■■□□□ 1.66
CBWD3-201ENST00000360171 NUTM2BA6NNL0 878 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-201ENST00000360171 NUTM2EB1AL46 878 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-201ENST00000360171 NUTM2AQ8IVF1 878 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-201ENST00000360171 CACNA1FO60840 1977 aa25.39■■□□□ 1.66
CBWD3-201ENST00000360171 NWD2Q9ULI1 1742 aa25.39■■□□□ 1.66
CBWD3-201ENST00000360171 EIF4A1P60842 406 aaKnown RBP25.39■■□□□ 1.65
CBWD3-201ENST00000360171 ZCRB1Q8TBF4 217 aaKnown RBP25.39■■□□□ 1.65
CBWD3-201ENST00000360171 SLKQ9H2G2 1235 aaPredicted RBP25.39■■□□□ 1.65
CBWD3-201ENST00000360171 ARHGAP45Q92619 1136 aa25.38■■□□□ 1.65
CBWD3-201ENST00000360171 RTN4Q9NQC3 1192 aaKnown RBP25.38■■□□□ 1.65
CBWD3-201ENST00000360171 PCDH11XQ9BZA7 1347 aa25.37■■□□□ 1.65
CBWD3-201ENST00000360171 PCDH11YQ9BZA8 1340 aa25.37■■□□□ 1.65
CBWD3-201ENST00000360171 TMEM57Q8N5G2 664 aa25.37■■□□□ 1.65
CBWD3-201ENST00000360171 DCAF5Q96JK2 942 aa25.37■■□□□ 1.65
CBWD3-201ENST00000360171 DISP2A7MBM2 1401 aa25.36■■□□□ 1.65
CBWD3-201ENST00000360171 ITPRIPQ8IWB1 547 aa25.36■■□□□ 1.65
CBWD3-201ENST00000360171 SLC52A2Q9HAB3 445 aa25.36■■□□□ 1.65
CBWD3-201ENST00000360171 ZBTB40Q9NUA8 1239 aa25.36■■□□□ 1.65
CBWD3-201ENST00000360171 RGS12O14924 1447 aa25.35■■□□□ 1.65
CBWD3-201ENST00000360171 SOS1Q07889 1333 aaPredicted RBP25.35■■□□□ 1.65
CBWD3-201ENST00000360171 C22orf23Q9BZE7 217 aa25.35■■□□□ 1.65
CBWD3-201ENST00000360171 JCADQ9P266 1359 aa25.35■■□□□ 1.65
CBWD3-201ENST00000360171 TOGARAM1Q9Y4F4 1720 aa25.34■■□□□ 1.65
CBWD3-201ENST00000360171 HSP90AB1P08238 724 aaKnown RBP25.34■■□□□ 1.65
CBWD3-201ENST00000360171 ABCC4O15439 1325 aa25.33■■□□□ 1.65
CBWD3-201ENST00000360171 SLC4A2P04920 1241 aa25.33■■□□□ 1.65
CBWD3-201ENST00000360171 NECTIN2Q92692 538 aa25.33■■□□□ 1.65
CBWD3-201ENST00000360171 SLIT2O94813 1529 aa25.33■■□□□ 1.65
CBWD3-201ENST00000360171 C5P01031 1676 aa25.33■■□□□ 1.65
CBWD3-201ENST00000360171 NFATC2IPQ8NCF5 419 aa25.32■■□□□ 1.64
CBWD3-201ENST00000360171 HEG1Q9ULI3 1381 aa25.31■■□□□ 1.64
CBWD3-201ENST00000360171 G2E3Q7L622 706 aa25.31■■□□□ 1.64
CBWD3-201ENST00000360171 API5Q9BZZ5 524 aaKnown RBP25.31■■□□□ 1.64
CBWD3-201ENST00000360171 L1TD1Q5T7N2 865 aaKnown RBP25.3■■□□□ 1.64
CBWD3-201ENST00000360171 CCDC30Q5VVM6 783 aa25.3■■□□□ 1.64
CBWD3-201ENST00000360171 SLC39A6Q13433 755 aa25.29■■□□□ 1.64
CBWD3-201ENST00000360171 DDX54Q8TDD1 881 aaKnown RBP25.29■■□□□ 1.64
CBWD3-201ENST00000360171 HOXB7P09629 217 aa25.28■■□□□ 1.64
CBWD3-201ENST00000360171 NKX1-1Q15270 411 aaPredicted RBP25.28■■□□□ 1.64
CBWD3-201ENST00000360171 HDGFL1Q5TGJ6 251 aa25.28■■□□□ 1.64
CBWD3-201ENST00000360171 STK31Q9BXU1 1019 aa25.28■■□□□ 1.64
CBWD3-201ENST00000360171 NUCB1Q02818 461 aa25.28■■□□□ 1.64
CBWD3-201ENST00000360171 CHMP4BQ9H444 224 aaKnown RBP25.28■■□□□ 1.64
CBWD3-201ENST00000360171 CHMP5Q9NZZ3 219 aa25.28■■□□□ 1.64
CBWD3-201ENST00000360171 PTPRCP08575 1304 aa25.28■■□□□ 1.64
CBWD3-201ENST00000360171 LRP6O75581 1613 aa25.27■■□□□ 1.64
CBWD3-201ENST00000360171 PAPPAQ13219 1627 aa25.27■■□□□ 1.64
CBWD3-201ENST00000360171 ZNF790Q6PG37 636 aa25.27■■□□□ 1.64
CBWD3-201ENST00000360171 FAM43AQ8N2R8 423 aa25.27■■□□□ 1.64
CBWD3-201ENST00000360171 GLI3P10071 1580 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms